ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:0304:0302

Extra

PDB:
ATOM 1 O3' G A 303 7.563 150.903 48.361 1.00 56.97 O
ATOM 2 P A A 304 6.613 149.900 47.546 1.00 57.64 P
ATOM 3 OP1 A A 304 5.596 150.706 46.836 1.00 58.10 O
ATOM 4 OP2 A A 304 6.177 148.835 48.480 1.00 57.44 O
ATOM 5 O5' A A 304 7.585 149.268 46.461 1.00 57.01 O
ATOM 6 C5' A A 304 8.405 150.112 45.651 1.00 57.07 C
ATOM 7 C4' A A 304 9.710 149.426 45.359 1.00 57.18 C
ATOM 8 O4' A A 304 10.420 149.182 46.598 1.00 56.88 O
ATOM 9 C3' A A 304 9.561 148.056 44.727 1.00 57.17 C
ATOM 10 O3' A A 304 9.417 148.198 43.312 1.00 57.01 O
ATOM 11 C2' A A 304 10.871 147.377 45.106 1.00 57.16 C
ATOM 12 O2' A A 304 11.921 147.747 44.238 1.00 57.45 O
ATOM 13 C1' A A 304 11.137 147.966 46.498 1.00 56.91 C
ATOM 14 N9 A A 304 10.768 147.124 47.636 1.00 56.75 N
ATOM 15 C8 A A 304 9.596 147.143 48.348 1.00 56.52 C
ATOM 16 N7 A A 304 9.571 146.296 49.348 1.00 56.98 N
ATOM 17 C5 A A 304 10.806 145.669 49.285 1.00 57.10 C
ATOM 18 C6 A A 304 11.404 144.671 50.075 1.00 57.26 C
ATOM 19 N6 A A 304 10.812 144.110 51.129 1.00 57.87 N
ATOM 20 N1 A A 304 12.649 144.266 49.741 1.00 57.18 N
ATOM 21 C2 A A 304 13.241 144.830 48.685 1.00 56.71 C
ATOM 22 N3 A A 304 12.785 145.778 47.871 1.00 56.43 N
ATOM 23 C4 A A 304 11.549 146.161 48.229 1.00 56.79 C
ATOM 24 P A A 305 8.206 147.468 42.550 1.00 56.63 P
ATOM 25 OP1 A A 305 8.166 147.901 41.132 1.00 56.08 O
ATOM 26 OP2 A A 305 6.997 147.628 43.401 1.00 56.72 O
ATOM 27 O5' A A 305 8.623 145.937 42.516 1.00 56.58 O
TER

ATOM 1 O3' U B 301 0.872 144.551 52.681 1.00 63.92 O
ATOM 2 P G B 302 1.281 146.099 52.759 1.00 62.95 P
ATOM 3 OP1 G B 302 1.191 146.547 54.171 1.00 62.59 O
ATOM 4 OP2 G B 302 0.500 146.807 51.713 1.00 63.08 O
ATOM 5 O5' G B 302 2.808 146.109 52.306 1.00 62.09 O
ATOM 6 C5' G B 302 3.795 145.346 53.016 1.00 59.76 C
ATOM 7 C4' G B 302 5.123 145.398 52.296 1.00 58.30 C
ATOM 8 O4' G B 302 5.043 144.680 51.035 1.00 57.81 O
ATOM 9 C3' G B 302 5.611 146.776 51.888 1.00 57.81 C
ATOM 10 O3' G B 302 6.199 147.474 52.973 1.00 57.33 O
ATOM 11 C2' G B 302 6.623 146.435 50.805 1.00 57.36 C
ATOM 12 O2' G B 302 7.853 145.979 51.325 1.00 57.78 O
ATOM 13 C1' G B 302 5.919 145.278 50.094 1.00 56.80 C
ATOM 14 N9 G B 302 5.125 145.769 48.977 1.00 55.68 N
ATOM 15 C8 G B 302 3.878 146.339 49.038 1.00 55.46 C
ATOM 16 N7 G B 302 3.443 146.743 47.878 1.00 56.00 N
ATOM 17 C5 G B 302 4.461 146.407 46.995 1.00 55.92 C
ATOM 18 C6 G B 302 4.566 146.604 45.593 1.00 56.63 C
ATOM 19 O6 G B 302 3.759 147.146 44.823 1.00 58.64 O
ATOM 20 N1 G B 302 5.759 146.098 45.097 1.00 55.81 N
ATOM 21 C2 G B 302 6.729 145.488 45.844 1.00 55.34 C
ATOM 22 N2 G B 302 7.800 145.059 45.168 1.00 55.42 N
ATOM 23 N3 G B 302 6.651 145.309 47.152 1.00 55.15 N
ATOM 24 C4 G B 302 5.497 145.789 47.657 1.00 55.28 C
ATOM 25 P G B 303 5.998 149.058 53.090 1.00 57.77 P
ATOM 26 OP1 G B 303 6.755 149.555 54.265 1.00 57.45 O
ATOM 27 OP2 G B 303 4.540 149.299 53.010 1.00 58.32 O
ATOM 28 O5' G B 303 6.686 149.615 51.768 1.00 56.60 O
TER

Atoms:
OP1: (5.596,150.706,46.836)
OP2: (6.177,148.835,48.480)
C3': (9.561,148.056,44.727)
C1': (11.137,147.966,46.498)
C5': (8.405,150.112,45.651)
O4': (10.420,149.182,46.598)
C8: (9.596,147.143,48.348)
O2': (11.921,147.747,44.238)
C6: (11.404,144.671,50.075)
C5: (10.806,145.669,49.285)
C4: (11.549,146.161,48.229)
P: (6.613,149.900,47.546)
C4': (9.710,149.426,45.359)
C2': (10.871,147.377,45.106)
C2: (13.241,144.830,48.685)
N1: (12.649,144.266,49.741)
N3: (12.785,145.778,47.871)
N6: (10.812,144.110,51.129)
N7: (9.571,146.296,49.348)
N9: (10.768,147.124,47.636)
O5': (7.585,149.268,46.461)
O3': (9.417,148.198,43.312)
OP1: (1.191,146.547,54.171)
OP2: (0.500,146.807,51.713)
C3': (5.611,146.776,51.888)
C1': (5.919,145.278,50.094)
C5': (3.795,145.346,53.016)
O6: (3.759,147.146,44.823)
O4': (5.043,144.680,51.035)
C8: (3.878,146.339,49.038)
C2: (6.729,145.488,45.844)
C6: (4.566,146.604,45.593)
C5: (4.461,146.407,46.995)
C4: (5.497,145.789,47.657)
P: (1.281,146.099,52.759)
C4': (5.123,145.398,52.296)
C2': (6.623,146.435,50.805)
O2': (7.853,145.979,51.325)
N1: (5.759,146.098,45.097)
N2: (7.800,145.059,45.168)
N3: (6.651,145.309,47.152)
N7: (3.443,146.743,47.878)
N9: (5.125,145.769,48.977)
O5': (2.808,146.109,52.306)
O3': (6.199,147.474,52.973)
Image (generated by PyMOL):
PyMOL image
show in jmol