ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:A150:A7

Extra

PDB:
ATOM 1 O3' G A 149 -12.928 31.284 15.368 1.00 24.86 O
ATOM 2 P A A 150 -13.577 29.940 14.776 1.00 27.70 P
ATOM 3 OP1 A A 150 -14.791 30.519 14.117 1.00 23.09 O
ATOM 4 OP2 A A 150 -13.650 28.877 15.809 1.00 27.27 O
ATOM 5 O5' A A 150 -12.526 29.506 13.679 1.00 25.82 O
ATOM 6 C5' A A 150 -12.566 30.085 12.381 1.00 25.33 C
ATOM 7 C4' A A 150 -11.682 29.313 11.429 1.00 28.07 C
ATOM 8 O4' A A 150 -10.275 29.617 11.690 1.00 24.30 O
ATOM 9 C3' A A 150 -11.801 27.787 11.507 1.00 24.63 C
ATOM 10 O3' A A 150 -11.602 27.234 10.210 1.00 25.81 O
ATOM 11 C2' A A 150 -10.587 27.405 12.345 1.00 23.83 C
ATOM 12 O2' A A 150 -10.136 26.080 12.190 1.00 26.64 O
ATOM 13 C1' A A 150 -9.586 28.388 11.756 1.00 22.03 C
ATOM 14 N9 A A 150 -8.279 28.419 12.420 1.00 25.14 N
ATOM 15 C8 A A 150 -7.951 27.964 13.672 1.00 23.82 C
ATOM 16 N7 A A 150 -6.668 28.052 13.930 1.00 23.01 N
ATOM 17 C5 A A 150 -6.120 28.580 12.765 1.00 20.77 C
ATOM 18 C6 A A 150 -4.801 28.908 12.392 1.00 20.47 C
ATOM 19 N6 A A 150 -3.739 28.753 13.179 1.00 18.62 N
ATOM 20 N1 A A 150 -4.610 29.412 11.150 1.00 20.71 N
ATOM 21 C2 A A 150 -5.660 29.566 10.336 1.00 22.41 C
ATOM 22 N3 A A 150 -6.939 29.294 10.576 1.00 20.52 N
ATOM 23 C4 A A 150 -7.096 28.782 11.815 1.00 22.90 C
ATOM 24 P U A 151 -12.854 26.725 9.339 1.00 30.25 P
ATOM 25 OP1 U A 151 -13.959 26.584 10.318 1.00 30.01 O
ATOM 26 OP2 U A 151 -12.322 25.552 8.601 1.00 28.97 O
ATOM 27 O5' U A 151 -13.140 27.943 8.355 1.00 31.57 O
TER

ATOM 1 O3' C B 6 0.272 24.074 17.042 1.00 20.94 O
ATOM 2 P G B 7 -0.340 25.223 17.955 1.00 23.03 P
ATOM 3 OP1 G B 7 0.880 25.979 18.368 1.00 21.35 O
ATOM 4 OP2 G B 7 -1.223 24.615 18.992 1.00 22.70 O
ATOM 5 O5' G B 7 -1.251 26.066 16.953 1.00 23.14 O
ATOM 6 C5' G B 7 -0.711 26.657 15.781 1.00 21.41 C
ATOM 7 C4' G B 7 -1.146 28.091 15.660 1.00 18.23 C
ATOM 8 O4' G B 7 -2.605 28.177 15.685 1.00 20.19 O
ATOM 9 C3' G B 7 -0.704 29.015 16.788 1.00 18.25 C
ATOM 10 O3' G B 7 0.633 29.455 16.623 1.00 19.30 O
ATOM 11 C2' G B 7 -1.736 30.130 16.692 1.00 18.73 C
ATOM 12 O2' G B 7 -1.478 30.930 15.542 1.00 18.53 O
ATOM 13 C1' G B 7 -3.008 29.322 16.400 1.00 18.54 C
ATOM 14 N9 G B 7 -3.702 28.881 17.632 1.00 18.56 N
ATOM 15 C8 G B 7 -3.600 27.659 18.256 1.00 19.03 C
ATOM 16 N7 G B 7 -4.334 27.562 19.338 1.00 19.30 N
ATOM 17 C5 G B 7 -4.961 28.803 19.439 1.00 19.03 C
ATOM 18 C6 G B 7 -5.874 29.310 20.401 1.00 21.69 C
ATOM 19 O6 G B 7 -6.335 28.714 21.385 1.00 23.01 O
ATOM 20 N1 G B 7 -6.268 30.627 20.136 1.00 18.05 N
ATOM 21 C2 G B 7 -5.819 31.361 19.062 1.00 20.62 C
ATOM 22 N2 G B 7 -6.281 32.618 18.939 1.00 19.93 N
ATOM 23 N3 G B 7 -4.969 30.895 18.154 1.00 20.21 N
ATOM 24 C4 G B 7 -4.576 29.627 18.400 1.00 19.35 C
ATOM 25 P U B 8 1.542 29.843 17.890 1.00 19.41 P
ATOM 26 OP1 U B 8 2.919 29.873 17.394 1.00 20.32 O
ATOM 27 OP2 U B 8 1.181 28.962 19.005 1.00 17.93 O
ATOM 28 O5' U B 8 1.028 31.300 18.215 1.00 17.90 O
TER

Atoms:
OP1: (-14.791,30.519,14.117)
OP2: (-13.650,28.877,15.809)
C3': (-11.801,27.787,11.507)
C1': (-9.586,28.388,11.756)
C5': (-12.566,30.085,12.381)
O4': (-10.275,29.617,11.690)
C8: (-7.951,27.964,13.672)
O2': (-10.136,26.080,12.190)
C6: (-4.801,28.908,12.392)
C5: (-6.120,28.580,12.765)
C4: (-7.096,28.782,11.815)
P: (-13.577,29.940,14.776)
C4': (-11.682,29.313,11.429)
C2': (-10.587,27.405,12.345)
C2: (-5.660,29.566,10.336)
N1: (-4.610,29.412,11.150)
N3: (-6.939,29.294,10.576)
N6: (-3.739,28.753,13.179)
N7: (-6.668,28.052,13.930)
N9: (-8.279,28.419,12.420)
O5': (-12.526,29.506,13.679)
O3': (-11.602,27.234,10.210)
OP1: (0.880,25.979,18.368)
OP2: (-1.223,24.615,18.992)
C3': (-0.704,29.015,16.788)
C1': (-3.008,29.322,16.400)
C5': (-0.711,26.657,15.781)
O6: (-6.335,28.714,21.385)
O4': (-2.605,28.177,15.685)
C8: (-3.600,27.659,18.256)
C2: (-5.819,31.361,19.062)
C6: (-5.874,29.310,20.401)
C5: (-4.961,28.803,19.439)
C4: (-4.576,29.627,18.400)
P: (-0.340,25.223,17.955)
C4': (-1.146,28.091,15.660)
C2': (-1.736,30.130,16.692)
O2': (-1.478,30.930,15.542)
N1: (-6.268,30.627,20.136)
N2: (-6.281,32.618,18.939)
N3: (-4.969,30.895,18.154)
N7: (-4.334,27.562,19.338)
N9: (-3.702,28.881,17.632)
O5': (-1.251,26.066,16.953)
O3': (0.633,29.455,16.623)
Image (generated by PyMOL):
PyMOL image
show in jmol