Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLJ:B7:B5
Extra
PDB:
ATOM 1 O3' U A 6 -26.020 -8.882 -54.741 1.00 94.69 O
ATOM 2 P A A 7 -25.843 -7.971 -53.435 1.00104.36 P
ATOM 3 OP1 A A 7 -26.632 -6.752 -53.740 1.00104.32 O
ATOM 4 OP2 A A 7 -24.388 -7.870 -53.163 1.00102.94 O
ATOM 5 O5' A A 7 -26.543 -8.837 -52.296 1.00121.83 O
ATOM 6 C5' A A 7 -27.897 -9.241 -52.419 1.00122.68 C
ATOM 7 C4' A A 7 -28.115 -10.628 -51.871 1.00122.75 C
ATOM 8 O4' A A 7 -27.102 -11.525 -52.392 1.00119.79 O
ATOM 9 C3' A A 7 -28.006 -10.769 -50.361 1.00126.08 C
ATOM 10 O3' A A 7 -29.214 -10.410 -49.712 1.00128.94 O
ATOM 11 C2' A A 7 -27.621 -12.232 -50.180 1.00128.10 C
ATOM 12 O2' A A 7 -28.771 -13.063 -50.262 1.00134.10 O
ATOM 13 C1' A A 7 -26.751 -12.479 -51.415 1.00121.77 C
ATOM 14 N9 A A 7 -25.306 -12.351 -51.145 1.00113.98 N
ATOM 15 C8 A A 7 -24.492 -11.273 -51.393 1.00106.22 C
ATOM 16 N7 A A 7 -23.242 -11.469 -51.050 1.00102.06 N
ATOM 17 C5 A A 7 -23.229 -12.763 -50.549 1.00107.64 C
ATOM 18 C6 A A 7 -22.201 -13.565 -50.021 1.00107.92 C
ATOM 19 N6 A A 7 -20.931 -13.167 -49.902 1.00102.70 N
ATOM 20 N1 A A 7 -22.532 -14.810 -49.612 1.00110.92 N
ATOM 21 C2 A A 7 -23.805 -15.210 -49.731 1.00112.04 C
ATOM 22 N3 A A 7 -24.856 -14.550 -50.210 1.00113.66 N
ATOM 23 C4 A A 7 -24.495 -13.319 -50.608 1.00112.57 C
ATOM 24 P U A 8 -29.262 -9.892 -48.192 1.00118.77 P
ATOM 25 OP1 U A 8 -29.920 -8.561 -48.192 1.00117.01 O
ATOM 26 OP2 U A 8 -27.914 -10.033 -47.594 1.00116.80 O
ATOM 27 O5' U A 8 -30.226 -10.986 -47.576 1.00119.68 O
TER
ATOM 1 O3' C B 4 -18.333 -3.505 -51.784 1.00 87.82 O
ATOM 2 P G B 5 -18.960 -4.004 -53.173 1.00 90.85 P
ATOM 3 OP1 G B 5 -17.793 -4.117 -54.082 1.00 96.62 O
ATOM 4 OP2 G B 5 -20.060 -3.067 -53.511 1.00 91.34 O
ATOM 5 O5' G B 5 -19.561 -5.444 -52.856 1.00 75.89 O
ATOM 6 C5' G B 5 -18.717 -6.564 -52.637 1.00 94.18 C
ATOM 7 C4' G B 5 -19.467 -7.703 -51.992 1.00 95.15 C
ATOM 8 O4' G B 5 -20.011 -7.273 -50.717 1.00 96.94 O
ATOM 9 C3' G B 5 -20.679 -8.216 -52.752 1.00 97.06 C
ATOM 10 O3' G B 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 11 C2' G B 5 -21.502 -8.867 -51.648 1.00 96.62 C
ATOM 12 O2' G B 5 -20.949 -10.123 -51.282 1.00 91.49 O
ATOM 13 C1' G B 5 -21.265 -7.885 -50.502 1.00 98.73 C
ATOM 14 N9 G B 5 -22.295 -6.831 -50.468 1.00101.67 N
ATOM 15 C8 G B 5 -22.190 -5.530 -50.902 1.00101.80 C
ATOM 16 N7 G B 5 -23.289 -4.846 -50.733 1.00102.37 N
ATOM 17 C5 G B 5 -24.171 -5.750 -50.155 1.00102.36 C
ATOM 18 C6 G B 5 -25.519 -5.599 -49.738 1.00101.00 C
ATOM 19 O6 G B 5 -26.233 -4.594 -49.801 1.00 95.69 O
ATOM 20 N1 G B 5 -26.027 -6.779 -49.202 1.00104.65 N
ATOM 21 C2 G B 5 -25.327 -7.953 -49.083 1.00104.09 C
ATOM 22 N2 G B 5 -25.976 -8.989 -48.544 1.00103.27 N
ATOM 23 N3 G B 5 -24.075 -8.106 -49.466 1.00105.40 N
ATOM 24 C4 G B 5 -23.568 -6.975 -49.986 1.00103.69 C
ATOM 25 P U B 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 26 OP1 U B 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 27 OP2 U B 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 28 O5' U B 6 -22.358 -9.192 -55.224 1.00109.20 O
TER
ATOM 2 P A A 7 -25.843 -7.971 -53.435 1.00104.36 P
ATOM 3 OP1 A A 7 -26.632 -6.752 -53.740 1.00104.32 O
ATOM 4 OP2 A A 7 -24.388 -7.870 -53.163 1.00102.94 O
ATOM 5 O5' A A 7 -26.543 -8.837 -52.296 1.00121.83 O
ATOM 6 C5' A A 7 -27.897 -9.241 -52.419 1.00122.68 C
ATOM 7 C4' A A 7 -28.115 -10.628 -51.871 1.00122.75 C
ATOM 8 O4' A A 7 -27.102 -11.525 -52.392 1.00119.79 O
ATOM 9 C3' A A 7 -28.006 -10.769 -50.361 1.00126.08 C
ATOM 10 O3' A A 7 -29.214 -10.410 -49.712 1.00128.94 O
ATOM 11 C2' A A 7 -27.621 -12.232 -50.180 1.00128.10 C
ATOM 12 O2' A A 7 -28.771 -13.063 -50.262 1.00134.10 O
ATOM 13 C1' A A 7 -26.751 -12.479 -51.415 1.00121.77 C
ATOM 14 N9 A A 7 -25.306 -12.351 -51.145 1.00113.98 N
ATOM 15 C8 A A 7 -24.492 -11.273 -51.393 1.00106.22 C
ATOM 16 N7 A A 7 -23.242 -11.469 -51.050 1.00102.06 N
ATOM 17 C5 A A 7 -23.229 -12.763 -50.549 1.00107.64 C
ATOM 18 C6 A A 7 -22.201 -13.565 -50.021 1.00107.92 C
ATOM 19 N6 A A 7 -20.931 -13.167 -49.902 1.00102.70 N
ATOM 20 N1 A A 7 -22.532 -14.810 -49.612 1.00110.92 N
ATOM 21 C2 A A 7 -23.805 -15.210 -49.731 1.00112.04 C
ATOM 22 N3 A A 7 -24.856 -14.550 -50.210 1.00113.66 N
ATOM 23 C4 A A 7 -24.495 -13.319 -50.608 1.00112.57 C
ATOM 24 P U A 8 -29.262 -9.892 -48.192 1.00118.77 P
ATOM 25 OP1 U A 8 -29.920 -8.561 -48.192 1.00117.01 O
ATOM 26 OP2 U A 8 -27.914 -10.033 -47.594 1.00116.80 O
ATOM 27 O5' U A 8 -30.226 -10.986 -47.576 1.00119.68 O
TER
ATOM 1 O3' C B 4 -18.333 -3.505 -51.784 1.00 87.82 O
ATOM 2 P G B 5 -18.960 -4.004 -53.173 1.00 90.85 P
ATOM 3 OP1 G B 5 -17.793 -4.117 -54.082 1.00 96.62 O
ATOM 4 OP2 G B 5 -20.060 -3.067 -53.511 1.00 91.34 O
ATOM 5 O5' G B 5 -19.561 -5.444 -52.856 1.00 75.89 O
ATOM 6 C5' G B 5 -18.717 -6.564 -52.637 1.00 94.18 C
ATOM 7 C4' G B 5 -19.467 -7.703 -51.992 1.00 95.15 C
ATOM 8 O4' G B 5 -20.011 -7.273 -50.717 1.00 96.94 O
ATOM 9 C3' G B 5 -20.679 -8.216 -52.752 1.00 97.06 C
ATOM 10 O3' G B 5 -20.336 -9.092 -53.810 1.00 97.80 O
ATOM 11 C2' G B 5 -21.502 -8.867 -51.648 1.00 96.62 C
ATOM 12 O2' G B 5 -20.949 -10.123 -51.282 1.00 91.49 O
ATOM 13 C1' G B 5 -21.265 -7.885 -50.502 1.00 98.73 C
ATOM 14 N9 G B 5 -22.295 -6.831 -50.468 1.00101.67 N
ATOM 15 C8 G B 5 -22.190 -5.530 -50.902 1.00101.80 C
ATOM 16 N7 G B 5 -23.289 -4.846 -50.733 1.00102.37 N
ATOM 17 C5 G B 5 -24.171 -5.750 -50.155 1.00102.36 C
ATOM 18 C6 G B 5 -25.519 -5.599 -49.738 1.00101.00 C
ATOM 19 O6 G B 5 -26.233 -4.594 -49.801 1.00 95.69 O
ATOM 20 N1 G B 5 -26.027 -6.779 -49.202 1.00104.65 N
ATOM 21 C2 G B 5 -25.327 -7.953 -49.083 1.00104.09 C
ATOM 22 N2 G B 5 -25.976 -8.989 -48.544 1.00103.27 N
ATOM 23 N3 G B 5 -24.075 -8.106 -49.466 1.00105.40 N
ATOM 24 C4 G B 5 -23.568 -6.975 -49.986 1.00103.69 C
ATOM 25 P U B 6 -20.823 -8.780 -55.310 1.00 95.58 P
ATOM 26 OP1 U B 6 -20.709 -7.322 -55.574 1.00 89.47 O
ATOM 27 OP2 U B 6 -20.071 -9.725 -56.171 1.00 99.19 O
ATOM 28 O5' U B 6 -22.358 -9.192 -55.224 1.00109.20 O
TER
Atoms:
OP1: (-26.632,-6.752,-53.740)
OP2: (-24.388,-7.870,-53.163)
C3': (-28.006,-10.769,-50.361)
C1': (-26.751,-12.479,-51.415)
C5': (-27.897,-9.241,-52.419)
O4': (-27.102,-11.525,-52.392)
C8: (-24.492,-11.273,-51.393)
O2': (-28.771,-13.063,-50.262)
C6: (-22.201,-13.565,-50.021)
C5: (-23.229,-12.763,-50.549)
C4: (-24.495,-13.319,-50.608)
P: (-25.843,-7.971,-53.435)
C4': (-28.115,-10.628,-51.871)
C2': (-27.621,-12.232,-50.180)
C2: (-23.805,-15.210,-49.731)
N1: (-22.532,-14.810,-49.612)
N3: (-24.856,-14.550,-50.210)
N6: (-20.931,-13.167,-49.902)
N7: (-23.242,-11.469,-51.050)
N9: (-25.306,-12.351,-51.145)
O5': (-26.543,-8.837,-52.296)
O3': (-29.214,-10.410,-49.712)
OP2: (-24.388,-7.870,-53.163)
C3': (-28.006,-10.769,-50.361)
C1': (-26.751,-12.479,-51.415)
C5': (-27.897,-9.241,-52.419)
O4': (-27.102,-11.525,-52.392)
C8: (-24.492,-11.273,-51.393)
O2': (-28.771,-13.063,-50.262)
C6: (-22.201,-13.565,-50.021)
C5: (-23.229,-12.763,-50.549)
C4: (-24.495,-13.319,-50.608)
P: (-25.843,-7.971,-53.435)
C4': (-28.115,-10.628,-51.871)
C2': (-27.621,-12.232,-50.180)
C2: (-23.805,-15.210,-49.731)
N1: (-22.532,-14.810,-49.612)
N3: (-24.856,-14.550,-50.210)
N6: (-20.931,-13.167,-49.902)
N7: (-23.242,-11.469,-51.050)
N9: (-25.306,-12.351,-51.145)
O5': (-26.543,-8.837,-52.296)
O3': (-29.214,-10.410,-49.712)
OP1: (-17.793,-4.117,-54.082)
OP2: (-20.060,-3.067,-53.511)
C3': (-20.679,-8.216,-52.752)
C1': (-21.265,-7.885,-50.502)
C5': (-18.717,-6.564,-52.637)
O6: (-26.233,-4.594,-49.801)
O4': (-20.011,-7.273,-50.717)
C8: (-22.190,-5.530,-50.902)
C2: (-25.327,-7.953,-49.083)
C6: (-25.519,-5.599,-49.738)
C5: (-24.171,-5.750,-50.155)
C4: (-23.568,-6.975,-49.986)
P: (-18.960,-4.004,-53.173)
C4': (-19.467,-7.703,-51.992)
C2': (-21.502,-8.867,-51.648)
O2': (-20.949,-10.123,-51.282)
N1: (-26.027,-6.779,-49.202)
N2: (-25.976,-8.989,-48.544)
N3: (-24.075,-8.106,-49.466)
N7: (-23.289,-4.846,-50.733)
N9: (-22.295,-6.831,-50.468)
O5': (-19.561,-5.444,-52.856)
O3': (-20.336,-9.092,-53.810)
OP2: (-20.060,-3.067,-53.511)
C3': (-20.679,-8.216,-52.752)
C1': (-21.265,-7.885,-50.502)
C5': (-18.717,-6.564,-52.637)
O6: (-26.233,-4.594,-49.801)
O4': (-20.011,-7.273,-50.717)
C8: (-22.190,-5.530,-50.902)
C2: (-25.327,-7.953,-49.083)
C6: (-25.519,-5.599,-49.738)
C5: (-24.171,-5.750,-50.155)
C4: (-23.568,-6.975,-49.986)
P: (-18.960,-4.004,-53.173)
C4': (-19.467,-7.703,-51.992)
C2': (-21.502,-8.867,-51.648)
O2': (-20.949,-10.123,-51.282)
N1: (-26.027,-6.779,-49.202)
N2: (-25.976,-8.989,-48.544)
N3: (-24.075,-8.106,-49.466)
N7: (-23.289,-4.846,-50.733)
N9: (-22.295,-6.831,-50.468)
O5': (-19.561,-5.444,-52.856)
O3': (-20.336,-9.092,-53.810)
Image (generated by PyMOL):