Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A59:A60
Extra
PDB:
ATOM 1 O3' C A 58 -9.076 6.397 -10.835 1.00 45.55 O
ATOM 2 P U A 59 -7.816 6.570 -9.865 1.00 50.23 P
ATOM 3 OP1 U A 59 -6.988 5.353 -10.009 1.00 45.52 O
ATOM 4 OP2 U A 59 -8.297 6.973 -8.518 1.00 46.40 O
ATOM 5 O5' U A 59 -7.045 7.804 -10.525 1.00 41.88 O
ATOM 6 C5' U A 59 -6.528 7.681 -11.832 1.00 42.37 C
ATOM 7 C4' U A 59 -6.046 9.027 -12.351 1.00 47.87 C
ATOM 8 O4' U A 59 -7.150 9.971 -12.366 1.00 49.06 O
ATOM 9 C3' U A 59 -4.958 9.740 -11.552 1.00 46.93 C
ATOM 10 O3' U A 59 -3.673 9.254 -11.919 1.00 47.28 O
ATOM 11 C2' U A 59 -5.129 11.143 -12.104 1.00 46.58 C
ATOM 12 O2' U A 59 -4.589 11.202 -13.411 1.00 47.18 O
ATOM 13 C1' U A 59 -6.651 11.275 -12.143 1.00 45.30 C
ATOM 14 N1 U A 59 -7.262 11.771 -10.880 1.00 44.03 N
ATOM 15 C2 U A 59 -7.394 13.127 -10.682 1.00 43.43 C
ATOM 16 O2 U A 59 -7.025 13.948 -11.501 1.00 43.70 O
ATOM 17 N3 U A 59 -7.971 13.490 -9.489 1.00 41.49 N
ATOM 18 C4 U A 59 -8.421 12.642 -8.496 1.00 42.44 C
ATOM 19 O4 U A 59 -8.918 13.103 -7.473 1.00 41.53 O
ATOM 20 C5 U A 59 -8.252 11.241 -8.781 1.00 43.44 C
ATOM 21 C6 U A 59 -7.692 10.865 -9.936 1.00 43.60 C
ATOM 22 P G A 60 -2.468 9.204 -10.868 1.00 50.34 P
ATOM 23 OP1 G A 60 -1.262 8.818 -11.638 1.00 44.40 O
ATOM 24 OP2 G A 60 -2.888 8.443 -9.663 1.00 43.93 O
ATOM 25 O5' G A 60 -2.317 10.737 -10.438 1.00 48.16 O
TER
ATOM 1 O3' U B 59 -3.673 9.254 -11.919 1.00 47.28 O
ATOM 2 P G B 60 -2.468 9.204 -10.868 1.00 50.34 P
ATOM 3 OP1 G B 60 -1.262 8.818 -11.638 1.00 44.40 O
ATOM 4 OP2 G B 60 -2.888 8.443 -9.663 1.00 43.93 O
ATOM 5 O5' G B 60 -2.317 10.737 -10.438 1.00 48.16 O
ATOM 6 C5' G B 60 -1.862 11.711 -11.366 1.00 46.22 C
ATOM 7 C4' G B 60 -1.942 13.096 -10.748 1.00 47.06 C
ATOM 8 O4' G B 60 -3.330 13.484 -10.567 1.00 46.18 O
ATOM 9 C3' G B 60 -1.357 13.243 -9.350 1.00 45.86 C
ATOM 10 O3' G B 60 0.062 13.344 -9.402 1.00 45.49 O
ATOM 11 C2' G B 60 -2.001 14.572 -8.989 1.00 45.33 C
ATOM 12 O2' G B 60 -1.471 15.610 -9.785 1.00 46.60 O
ATOM 13 C1' G B 60 -3.437 14.309 -9.421 1.00 44.52 C
ATOM 14 N9 G B 60 -4.220 13.606 -8.416 1.00 43.17 N
ATOM 15 C8 G B 60 -4.294 12.248 -8.245 1.00 45.24 C
ATOM 16 N7 G B 60 -5.069 11.885 -7.260 1.00 43.98 N
ATOM 17 C5 G B 60 -5.541 13.076 -6.748 1.00 40.40 C
ATOM 18 C6 G B 60 -6.419 13.290 -5.670 1.00 40.91 C
ATOM 19 O6 G B 60 -6.955 12.440 -4.952 1.00 41.98 O
ATOM 20 N1 G B 60 -6.650 14.644 -5.465 1.00 41.20 N
ATOM 21 C2 G B 60 -6.086 15.647 -6.222 1.00 42.18 C
ATOM 22 N2 G B 60 -6.424 16.891 -5.877 1.00 43.21 N
ATOM 23 N3 G B 60 -5.252 15.462 -7.237 1.00 41.18 N
ATOM 24 C4 G B 60 -5.027 14.147 -7.444 1.00 41.87 C
ATOM 25 P A B 61 0.963 13.037 -8.110 1.00 49.70 P
ATOM 26 OP1 A B 61 2.345 12.974 -8.638 1.00 45.55 O
ATOM 27 OP2 A B 61 0.397 11.910 -7.335 1.00 43.97 O
ATOM 28 O5' A B 61 0.776 14.338 -7.182 1.00 49.02 O
TER
ATOM 2 P U A 59 -7.816 6.570 -9.865 1.00 50.23 P
ATOM 3 OP1 U A 59 -6.988 5.353 -10.009 1.00 45.52 O
ATOM 4 OP2 U A 59 -8.297 6.973 -8.518 1.00 46.40 O
ATOM 5 O5' U A 59 -7.045 7.804 -10.525 1.00 41.88 O
ATOM 6 C5' U A 59 -6.528 7.681 -11.832 1.00 42.37 C
ATOM 7 C4' U A 59 -6.046 9.027 -12.351 1.00 47.87 C
ATOM 8 O4' U A 59 -7.150 9.971 -12.366 1.00 49.06 O
ATOM 9 C3' U A 59 -4.958 9.740 -11.552 1.00 46.93 C
ATOM 10 O3' U A 59 -3.673 9.254 -11.919 1.00 47.28 O
ATOM 11 C2' U A 59 -5.129 11.143 -12.104 1.00 46.58 C
ATOM 12 O2' U A 59 -4.589 11.202 -13.411 1.00 47.18 O
ATOM 13 C1' U A 59 -6.651 11.275 -12.143 1.00 45.30 C
ATOM 14 N1 U A 59 -7.262 11.771 -10.880 1.00 44.03 N
ATOM 15 C2 U A 59 -7.394 13.127 -10.682 1.00 43.43 C
ATOM 16 O2 U A 59 -7.025 13.948 -11.501 1.00 43.70 O
ATOM 17 N3 U A 59 -7.971 13.490 -9.489 1.00 41.49 N
ATOM 18 C4 U A 59 -8.421 12.642 -8.496 1.00 42.44 C
ATOM 19 O4 U A 59 -8.918 13.103 -7.473 1.00 41.53 O
ATOM 20 C5 U A 59 -8.252 11.241 -8.781 1.00 43.44 C
ATOM 21 C6 U A 59 -7.692 10.865 -9.936 1.00 43.60 C
ATOM 22 P G A 60 -2.468 9.204 -10.868 1.00 50.34 P
ATOM 23 OP1 G A 60 -1.262 8.818 -11.638 1.00 44.40 O
ATOM 24 OP2 G A 60 -2.888 8.443 -9.663 1.00 43.93 O
ATOM 25 O5' G A 60 -2.317 10.737 -10.438 1.00 48.16 O
TER
ATOM 1 O3' U B 59 -3.673 9.254 -11.919 1.00 47.28 O
ATOM 2 P G B 60 -2.468 9.204 -10.868 1.00 50.34 P
ATOM 3 OP1 G B 60 -1.262 8.818 -11.638 1.00 44.40 O
ATOM 4 OP2 G B 60 -2.888 8.443 -9.663 1.00 43.93 O
ATOM 5 O5' G B 60 -2.317 10.737 -10.438 1.00 48.16 O
ATOM 6 C5' G B 60 -1.862 11.711 -11.366 1.00 46.22 C
ATOM 7 C4' G B 60 -1.942 13.096 -10.748 1.00 47.06 C
ATOM 8 O4' G B 60 -3.330 13.484 -10.567 1.00 46.18 O
ATOM 9 C3' G B 60 -1.357 13.243 -9.350 1.00 45.86 C
ATOM 10 O3' G B 60 0.062 13.344 -9.402 1.00 45.49 O
ATOM 11 C2' G B 60 -2.001 14.572 -8.989 1.00 45.33 C
ATOM 12 O2' G B 60 -1.471 15.610 -9.785 1.00 46.60 O
ATOM 13 C1' G B 60 -3.437 14.309 -9.421 1.00 44.52 C
ATOM 14 N9 G B 60 -4.220 13.606 -8.416 1.00 43.17 N
ATOM 15 C8 G B 60 -4.294 12.248 -8.245 1.00 45.24 C
ATOM 16 N7 G B 60 -5.069 11.885 -7.260 1.00 43.98 N
ATOM 17 C5 G B 60 -5.541 13.076 -6.748 1.00 40.40 C
ATOM 18 C6 G B 60 -6.419 13.290 -5.670 1.00 40.91 C
ATOM 19 O6 G B 60 -6.955 12.440 -4.952 1.00 41.98 O
ATOM 20 N1 G B 60 -6.650 14.644 -5.465 1.00 41.20 N
ATOM 21 C2 G B 60 -6.086 15.647 -6.222 1.00 42.18 C
ATOM 22 N2 G B 60 -6.424 16.891 -5.877 1.00 43.21 N
ATOM 23 N3 G B 60 -5.252 15.462 -7.237 1.00 41.18 N
ATOM 24 C4 G B 60 -5.027 14.147 -7.444 1.00 41.87 C
ATOM 25 P A B 61 0.963 13.037 -8.110 1.00 49.70 P
ATOM 26 OP1 A B 61 2.345 12.974 -8.638 1.00 45.55 O
ATOM 27 OP2 A B 61 0.397 11.910 -7.335 1.00 43.97 O
ATOM 28 O5' A B 61 0.776 14.338 -7.182 1.00 49.02 O
TER
Atoms:
C4: (-8.421,12.642,-8.496)
N3: (-7.971,13.490,-9.489)
OP1: (-6.988,5.353,-10.009)
OP2: (-8.297,6.973,-8.518)
C2: (-7.394,13.127,-10.682)
C1': (-6.651,11.275,-12.143)
C3': (-4.958,9.740,-11.552)
O5': (-7.045,7.804,-10.525)
O4': (-7.150,9.971,-12.366)
C5': (-6.528,7.681,-11.832)
P: (-7.816,6.570,-9.865)
C4': (-6.046,9.027,-12.351)
C2': (-5.129,11.143,-12.104)
O2': (-4.589,11.202,-13.411)
N1: (-7.262,11.771,-10.880)
O4: (-8.918,13.103,-7.473)
O2: (-7.025,13.948,-11.501)
C6: (-7.692,10.865,-9.936)
C5: (-8.252,11.241,-8.781)
O3': (-3.673,9.254,-11.919)
N3: (-7.971,13.490,-9.489)
OP1: (-6.988,5.353,-10.009)
OP2: (-8.297,6.973,-8.518)
C2: (-7.394,13.127,-10.682)
C1': (-6.651,11.275,-12.143)
C3': (-4.958,9.740,-11.552)
O5': (-7.045,7.804,-10.525)
O4': (-7.150,9.971,-12.366)
C5': (-6.528,7.681,-11.832)
P: (-7.816,6.570,-9.865)
C4': (-6.046,9.027,-12.351)
C2': (-5.129,11.143,-12.104)
O2': (-4.589,11.202,-13.411)
N1: (-7.262,11.771,-10.880)
O4: (-8.918,13.103,-7.473)
O2: (-7.025,13.948,-11.501)
C6: (-7.692,10.865,-9.936)
C5: (-8.252,11.241,-8.781)
O3': (-3.673,9.254,-11.919)
OP1: (-1.262,8.818,-11.638)
OP2: (-2.888,8.443,-9.663)
C3': (-1.357,13.243,-9.350)
C1': (-3.437,14.309,-9.421)
C5': (-1.862,11.711,-11.366)
O6: (-6.955,12.440,-4.952)
O4': (-3.330,13.484,-10.567)
C8: (-4.294,12.248,-8.245)
C2: (-6.086,15.647,-6.222)
C6: (-6.419,13.290,-5.670)
C5: (-5.541,13.076,-6.748)
C4: (-5.027,14.147,-7.444)
P: (-2.468,9.204,-10.868)
C4': (-1.942,13.096,-10.748)
C2': (-2.001,14.572,-8.989)
O2': (-1.471,15.610,-9.785)
N1: (-6.650,14.644,-5.465)
N2: (-6.424,16.891,-5.877)
N3: (-5.252,15.462,-7.237)
N7: (-5.069,11.885,-7.260)
N9: (-4.220,13.606,-8.416)
O5': (-2.317,10.737,-10.438)
O3': (0.062,13.344,-9.402)
OP2: (-2.888,8.443,-9.663)
C3': (-1.357,13.243,-9.350)
C1': (-3.437,14.309,-9.421)
C5': (-1.862,11.711,-11.366)
O6: (-6.955,12.440,-4.952)
O4': (-3.330,13.484,-10.567)
C8: (-4.294,12.248,-8.245)
C2: (-6.086,15.647,-6.222)
C6: (-6.419,13.290,-5.670)
C5: (-5.541,13.076,-6.748)
C4: (-5.027,14.147,-7.444)
P: (-2.468,9.204,-10.868)
C4': (-1.942,13.096,-10.748)
C2': (-2.001,14.572,-8.989)
O2': (-1.471,15.610,-9.785)
N1: (-6.650,14.644,-5.465)
N2: (-6.424,16.891,-5.877)
N3: (-5.252,15.462,-7.237)
N7: (-5.069,11.885,-7.260)
N9: (-4.220,13.606,-8.416)
O5': (-2.317,10.737,-10.438)
O3': (0.062,13.344,-9.402)
Image (generated by PyMOL):