Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:B11:B12
Extra
PDB:
ATOM 1 O3' G A 10 43.873 37.651 17.642 1.00 19.82 O
ATOM 2 P U A 11 43.338 36.411 16.778 1.00 22.39 P
ATOM 3 OP1 U A 11 43.697 36.681 15.365 1.00 24.90 O
ATOM 4 OP2 U A 11 41.911 36.092 17.087 1.00 21.69 O
ATOM 5 O5' U A 11 44.216 35.210 17.328 1.00 22.18 O
ATOM 6 C5' U A 11 45.631 35.235 17.431 1.00 23.30 C
ATOM 7 C4' U A 11 46.053 34.092 18.324 1.00 23.47 C
ATOM 8 O4' U A 11 45.585 34.407 19.650 1.00 24.16 O
ATOM 9 C3' U A 11 45.379 32.762 18.038 1.00 24.17 C
ATOM 10 O3' U A 11 46.002 32.025 17.001 1.00 25.34 O
ATOM 11 C2' U A 11 45.480 32.063 19.387 1.00 24.73 C
ATOM 12 O2' U A 11 46.740 31.446 19.625 1.00 24.44 O
ATOM 13 C1' U A 11 45.230 33.216 20.348 1.00 24.40 C
ATOM 14 N1 U A 11 43.807 33.254 20.851 1.00 24.03 N
ATOM 15 C2 U A 11 43.457 32.478 21.932 1.00 24.71 C
ATOM 16 O2 U A 11 44.217 31.765 22.511 1.00 25.74 O
ATOM 17 N3 U A 11 42.176 32.538 22.324 1.00 25.01 N
ATOM 18 C4 U A 11 41.208 33.297 21.760 1.00 25.71 C
ATOM 19 O4 U A 11 40.075 33.253 22.214 1.00 27.07 O
ATOM 20 C5 U A 11 41.630 34.085 20.640 1.00 25.35 C
ATOM 21 C6 U A 11 42.886 34.029 20.235 1.00 23.95 C
ATOM 22 P G A 12 45.104 31.018 16.145 1.00 24.80 P
ATOM 23 OP1 G A 12 45.977 30.220 15.279 1.00 27.77 O
ATOM 24 OP2 G A 12 43.997 31.775 15.566 1.00 25.23 O
ATOM 25 O5' G A 12 44.514 30.043 17.225 1.00 24.57 O
TER
ATOM 1 O3' U B 11 46.002 32.025 17.001 1.00 25.34 O
ATOM 2 P G B 12 45.104 31.018 16.145 1.00 24.80 P
ATOM 3 OP1 G B 12 45.977 30.220 15.279 1.00 27.77 O
ATOM 4 OP2 G B 12 43.997 31.775 15.566 1.00 25.23 O
ATOM 5 O5' G B 12 44.514 30.043 17.225 1.00 24.57 O
ATOM 6 C5' G B 12 45.371 29.073 17.728 1.00 25.00 C
ATOM 7 C4' G B 12 44.595 28.133 18.597 1.00 26.18 C
ATOM 8 O4' G B 12 43.581 28.880 19.308 1.00 28.03 O
ATOM 9 C3' G B 12 43.854 27.040 17.863 1.00 25.46 C
ATOM 10 O3' G B 12 43.883 25.851 18.601 1.00 23.16 O
ATOM 11 C2' G B 12 42.447 27.575 17.744 1.00 27.05 C
ATOM 12 O2' G B 12 41.511 26.525 17.720 1.00 29.56 O
ATOM 13 C1' G B 12 42.307 28.412 18.997 1.00 28.02 C
ATOM 14 N9 G B 12 41.461 29.577 18.852 1.00 30.03 N
ATOM 15 C8 G B 12 41.544 30.543 17.890 1.00 31.37 C
ATOM 16 N7 G B 12 40.640 31.488 18.035 1.00 32.53 N
ATOM 17 C5 G B 12 39.930 31.126 19.176 1.00 31.61 C
ATOM 18 C6 G B 12 38.830 31.753 19.827 1.00 30.52 C
ATOM 19 O6 G B 12 38.247 32.803 19.527 1.00 30.65 O
ATOM 20 N1 G B 12 38.420 31.061 20.951 1.00 30.08 N
ATOM 21 C2 G B 12 38.999 29.900 21.377 1.00 30.73 C
ATOM 22 N2 G B 12 38.489 29.354 22.475 1.00 31.01 N
ATOM 23 N3 G B 12 40.017 29.301 20.786 1.00 32.07 N
ATOM 24 C4 G B 12 40.432 29.960 19.690 1.00 31.52 C
ATOM 25 P C B 13 43.844 24.469 17.836 1.00 22.42 P
ATOM 26 OP1 C B 13 45.028 24.441 16.943 1.00 21.84 O
ATOM 27 OP2 C B 13 42.472 24.298 17.296 1.00 22.32 O
ATOM 28 O5' C B 13 43.999 23.382 18.991 1.00 22.82 O
TER
ATOM 2 P U A 11 43.338 36.411 16.778 1.00 22.39 P
ATOM 3 OP1 U A 11 43.697 36.681 15.365 1.00 24.90 O
ATOM 4 OP2 U A 11 41.911 36.092 17.087 1.00 21.69 O
ATOM 5 O5' U A 11 44.216 35.210 17.328 1.00 22.18 O
ATOM 6 C5' U A 11 45.631 35.235 17.431 1.00 23.30 C
ATOM 7 C4' U A 11 46.053 34.092 18.324 1.00 23.47 C
ATOM 8 O4' U A 11 45.585 34.407 19.650 1.00 24.16 O
ATOM 9 C3' U A 11 45.379 32.762 18.038 1.00 24.17 C
ATOM 10 O3' U A 11 46.002 32.025 17.001 1.00 25.34 O
ATOM 11 C2' U A 11 45.480 32.063 19.387 1.00 24.73 C
ATOM 12 O2' U A 11 46.740 31.446 19.625 1.00 24.44 O
ATOM 13 C1' U A 11 45.230 33.216 20.348 1.00 24.40 C
ATOM 14 N1 U A 11 43.807 33.254 20.851 1.00 24.03 N
ATOM 15 C2 U A 11 43.457 32.478 21.932 1.00 24.71 C
ATOM 16 O2 U A 11 44.217 31.765 22.511 1.00 25.74 O
ATOM 17 N3 U A 11 42.176 32.538 22.324 1.00 25.01 N
ATOM 18 C4 U A 11 41.208 33.297 21.760 1.00 25.71 C
ATOM 19 O4 U A 11 40.075 33.253 22.214 1.00 27.07 O
ATOM 20 C5 U A 11 41.630 34.085 20.640 1.00 25.35 C
ATOM 21 C6 U A 11 42.886 34.029 20.235 1.00 23.95 C
ATOM 22 P G A 12 45.104 31.018 16.145 1.00 24.80 P
ATOM 23 OP1 G A 12 45.977 30.220 15.279 1.00 27.77 O
ATOM 24 OP2 G A 12 43.997 31.775 15.566 1.00 25.23 O
ATOM 25 O5' G A 12 44.514 30.043 17.225 1.00 24.57 O
TER
ATOM 1 O3' U B 11 46.002 32.025 17.001 1.00 25.34 O
ATOM 2 P G B 12 45.104 31.018 16.145 1.00 24.80 P
ATOM 3 OP1 G B 12 45.977 30.220 15.279 1.00 27.77 O
ATOM 4 OP2 G B 12 43.997 31.775 15.566 1.00 25.23 O
ATOM 5 O5' G B 12 44.514 30.043 17.225 1.00 24.57 O
ATOM 6 C5' G B 12 45.371 29.073 17.728 1.00 25.00 C
ATOM 7 C4' G B 12 44.595 28.133 18.597 1.00 26.18 C
ATOM 8 O4' G B 12 43.581 28.880 19.308 1.00 28.03 O
ATOM 9 C3' G B 12 43.854 27.040 17.863 1.00 25.46 C
ATOM 10 O3' G B 12 43.883 25.851 18.601 1.00 23.16 O
ATOM 11 C2' G B 12 42.447 27.575 17.744 1.00 27.05 C
ATOM 12 O2' G B 12 41.511 26.525 17.720 1.00 29.56 O
ATOM 13 C1' G B 12 42.307 28.412 18.997 1.00 28.02 C
ATOM 14 N9 G B 12 41.461 29.577 18.852 1.00 30.03 N
ATOM 15 C8 G B 12 41.544 30.543 17.890 1.00 31.37 C
ATOM 16 N7 G B 12 40.640 31.488 18.035 1.00 32.53 N
ATOM 17 C5 G B 12 39.930 31.126 19.176 1.00 31.61 C
ATOM 18 C6 G B 12 38.830 31.753 19.827 1.00 30.52 C
ATOM 19 O6 G B 12 38.247 32.803 19.527 1.00 30.65 O
ATOM 20 N1 G B 12 38.420 31.061 20.951 1.00 30.08 N
ATOM 21 C2 G B 12 38.999 29.900 21.377 1.00 30.73 C
ATOM 22 N2 G B 12 38.489 29.354 22.475 1.00 31.01 N
ATOM 23 N3 G B 12 40.017 29.301 20.786 1.00 32.07 N
ATOM 24 C4 G B 12 40.432 29.960 19.690 1.00 31.52 C
ATOM 25 P C B 13 43.844 24.469 17.836 1.00 22.42 P
ATOM 26 OP1 C B 13 45.028 24.441 16.943 1.00 21.84 O
ATOM 27 OP2 C B 13 42.472 24.298 17.296 1.00 22.32 O
ATOM 28 O5' C B 13 43.999 23.382 18.991 1.00 22.82 O
TER
Atoms:
C4: (41.208,33.297,21.760)
N3: (42.176,32.538,22.324)
OP1: (43.697,36.681,15.365)
OP2: (41.911,36.092,17.087)
C2: (43.457,32.478,21.932)
C1': (45.230,33.216,20.348)
C3': (45.379,32.762,18.038)
O5': (44.216,35.210,17.328)
O4': (45.585,34.407,19.650)
C5': (45.631,35.235,17.431)
P: (43.338,36.411,16.778)
C4': (46.053,34.092,18.324)
C2': (45.480,32.063,19.387)
O2': (46.740,31.446,19.625)
N1: (43.807,33.254,20.851)
O4: (40.075,33.253,22.214)
O2: (44.217,31.765,22.511)
C6: (42.886,34.029,20.235)
C5: (41.630,34.085,20.640)
O3': (46.002,32.025,17.001)
N3: (42.176,32.538,22.324)
OP1: (43.697,36.681,15.365)
OP2: (41.911,36.092,17.087)
C2: (43.457,32.478,21.932)
C1': (45.230,33.216,20.348)
C3': (45.379,32.762,18.038)
O5': (44.216,35.210,17.328)
O4': (45.585,34.407,19.650)
C5': (45.631,35.235,17.431)
P: (43.338,36.411,16.778)
C4': (46.053,34.092,18.324)
C2': (45.480,32.063,19.387)
O2': (46.740,31.446,19.625)
N1: (43.807,33.254,20.851)
O4: (40.075,33.253,22.214)
O2: (44.217,31.765,22.511)
C6: (42.886,34.029,20.235)
C5: (41.630,34.085,20.640)
O3': (46.002,32.025,17.001)
OP1: (45.977,30.220,15.279)
OP2: (43.997,31.775,15.566)
C3': (43.854,27.040,17.863)
C1': (42.307,28.412,18.997)
C5': (45.371,29.073,17.728)
O6: (38.247,32.803,19.527)
O4': (43.581,28.880,19.308)
C8: (41.544,30.543,17.890)
C2: (38.999,29.900,21.377)
C6: (38.830,31.753,19.827)
C5: (39.930,31.126,19.176)
C4: (40.432,29.960,19.690)
P: (45.104,31.018,16.145)
C4': (44.595,28.133,18.597)
C2': (42.447,27.575,17.744)
O2': (41.511,26.525,17.720)
N1: (38.420,31.061,20.951)
N2: (38.489,29.354,22.475)
N3: (40.017,29.301,20.786)
N7: (40.640,31.488,18.035)
N9: (41.461,29.577,18.852)
O5': (44.514,30.043,17.225)
O3': (43.883,25.851,18.601)
OP2: (43.997,31.775,15.566)
C3': (43.854,27.040,17.863)
C1': (42.307,28.412,18.997)
C5': (45.371,29.073,17.728)
O6: (38.247,32.803,19.527)
O4': (43.581,28.880,19.308)
C8: (41.544,30.543,17.890)
C2: (38.999,29.900,21.377)
C6: (38.830,31.753,19.827)
C5: (39.930,31.126,19.176)
C4: (40.432,29.960,19.690)
P: (45.104,31.018,16.145)
C4': (44.595,28.133,18.597)
C2': (42.447,27.575,17.744)
O2': (41.511,26.525,17.720)
N1: (38.420,31.061,20.951)
N2: (38.489,29.354,22.475)
N3: (40.017,29.301,20.786)
N7: (40.640,31.488,18.035)
N9: (41.461,29.577,18.852)
O5': (44.514,30.043,17.225)
O3': (43.883,25.851,18.601)
Image (generated by PyMOL):