ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0354:0355

Extra

PDB:
ATOM 1 O3' G A 353 69.175 116.435 -11.597 1.00102.56 O
ATOM 2 P U A 354 69.471 114.948 -12.137 1.00104.31 P
ATOM 3 OP1 U A 354 70.523 115.054 -13.184 1.00103.54 O
ATOM 4 OP2 U A 354 68.167 114.307 -12.467 1.00103.16 O
ATOM 5 O5' U A 354 70.108 114.196 -10.881 1.00104.61 O
ATOM 6 C5' U A 354 71.363 114.635 -10.315 1.00104.73 C
ATOM 7 C4' U A 354 71.661 113.881 -9.039 1.00104.78 C
ATOM 8 O4' U A 354 70.617 114.144 -8.071 1.00104.09 O
ATOM 9 C3' U A 354 71.723 112.365 -9.156 1.00105.17 C
ATOM 10 O3' U A 354 73.043 111.958 -9.528 1.00108.28 O
ATOM 11 C2' U A 354 71.373 111.901 -7.744 1.00103.56 C
ATOM 12 O2' U A 354 72.487 111.879 -6.873 1.00102.99 O
ATOM 13 C1' U A 354 70.409 112.993 -7.275 1.00103.04 C
ATOM 14 N1 U A 354 68.981 112.635 -7.316 1.00101.91 N
ATOM 15 C2 U A 354 68.484 111.845 -6.287 1.00101.52 C
ATOM 16 O2 U A 354 69.178 111.418 -5.379 1.00101.78 O
ATOM 17 N3 U A 354 67.142 111.570 -6.362 1.00100.70 N
ATOM 18 C4 U A 354 66.262 111.985 -7.337 1.00101.00 C
ATOM 19 O4 U A 354 65.075 111.664 -7.254 1.00100.16 O
ATOM 20 C5 U A 354 66.848 112.784 -8.372 1.00101.35 C
ATOM 21 C6 U A 354 68.155 113.074 -8.328 1.00101.60 C
ATOM 22 P G A 355 73.261 110.871 -10.701 1.00109.71 P
ATOM 23 OP1 G A 355 74.680 111.010 -11.132 1.00109.46 O
ATOM 24 OP2 G A 355 72.173 110.995 -11.704 1.00109.19 O
ATOM 25 O5' G A 355 73.114 109.460 -9.979 1.00109.36 O
TER

ATOM 1 O3' U B 354 73.043 111.958 -9.528 1.00108.28 O
ATOM 2 P G B 355 73.261 110.871 -10.701 1.00109.71 P
ATOM 3 OP1 G B 355 74.680 111.010 -11.132 1.00109.46 O
ATOM 4 OP2 G B 355 72.173 110.995 -11.704 1.00109.19 O
ATOM 5 O5' G B 355 73.114 109.460 -9.979 1.00109.36 O
ATOM 6 C5' G B 355 73.691 109.228 -8.677 1.00110.61 C
ATOM 7 C4' G B 355 72.784 108.332 -7.868 1.00111.08 C
ATOM 8 O4' G B 355 71.459 108.924 -7.886 1.00111.24 O
ATOM 9 C3' G B 355 72.629 106.907 -8.396 1.00111.71 C
ATOM 10 O3' G B 355 72.464 106.006 -7.303 1.00112.76 O
ATOM 11 C2' G B 355 71.343 106.969 -9.215 1.00111.26 C
ATOM 12 O2' G B 355 70.644 105.740 -9.259 1.00111.03 O
ATOM 13 C1' G B 355 70.536 108.025 -8.463 1.00110.68 C
ATOM 14 N9 G B 355 69.656 108.787 -9.344 1.00109.98 N
ATOM 15 C8 G B 355 70.011 109.494 -10.470 1.00109.76 C
ATOM 16 N7 G B 355 68.995 110.061 -11.060 1.00109.79 N
ATOM 17 C5 G B 355 67.904 109.710 -10.277 1.00109.35 C
ATOM 18 C6 G B 355 66.529 110.026 -10.422 1.00109.32 C
ATOM 19 O6 G B 355 65.982 110.700 -11.305 1.00109.15 O
ATOM 20 N1 G B 355 65.767 109.465 -9.399 1.00109.20 N
ATOM 21 C2 G B 355 66.263 108.702 -8.369 1.00108.66 C
ATOM 22 N2 G B 355 65.373 108.261 -7.471 1.00107.92 N
ATOM 23 N3 G B 355 67.540 108.397 -8.228 1.00108.64 N
ATOM 24 C4 G B 355 68.298 108.929 -9.210 1.00109.36 C
ATOM 25 P C B 356 73.199 104.573 -7.321 1.00113.08 P
ATOM 26 OP1 C B 356 74.536 104.740 -6.689 1.00112.84 O
ATOM 27 OP2 C B 356 73.097 103.997 -8.687 1.00112.54 O
ATOM 28 O5' C B 356 72.313 103.687 -6.342 1.00112.13 O
TER

Atoms:
C4: (66.262,111.985,-7.337)
N3: (67.142,111.570,-6.362)
OP1: (70.523,115.054,-13.184)
OP2: (68.167,114.307,-12.467)
C2: (68.484,111.845,-6.287)
C1': (70.409,112.993,-7.275)
C3': (71.723,112.365,-9.156)
O5': (70.108,114.196,-10.881)
O4': (70.617,114.144,-8.071)
C5': (71.363,114.635,-10.315)
P: (69.471,114.948,-12.137)
C4': (71.661,113.881,-9.039)
C2': (71.373,111.901,-7.744)
O2': (72.487,111.879,-6.873)
N1: (68.981,112.635,-7.316)
O4: (65.075,111.664,-7.254)
O2: (69.178,111.418,-5.379)
C6: (68.155,113.074,-8.328)
C5: (66.848,112.784,-8.372)
O3': (73.043,111.958,-9.528)
OP1: (74.680,111.010,-11.132)
OP2: (72.173,110.995,-11.704)
C3': (72.629,106.907,-8.396)
C1': (70.536,108.025,-8.463)
C5': (73.691,109.228,-8.677)
O6: (65.982,110.700,-11.305)
O4': (71.459,108.924,-7.886)
C8: (70.011,109.494,-10.470)
C2: (66.263,108.702,-8.369)
C6: (66.529,110.026,-10.422)
C5: (67.904,109.710,-10.277)
C4: (68.298,108.929,-9.210)
P: (73.261,110.871,-10.701)
C4': (72.784,108.332,-7.868)
C2': (71.343,106.969,-9.215)
O2': (70.644,105.740,-9.259)
N1: (65.767,109.465,-9.399)
N2: (65.373,108.261,-7.471)
N3: (67.540,108.397,-8.228)
N7: (68.995,110.061,-11.060)
N9: (69.656,108.787,-9.344)
O5': (73.114,109.460,-9.979)
O3': (72.464,106.006,-7.303)
Image (generated by PyMOL):
PyMOL image
show in jmol