ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:02009:0523

Extra

PDB:
ATOM 1 O3' A A2008 34.490 132.997 104.062 1.00 39.48 O
ATOM 2 P U A2009 34.490 134.522 104.543 1.00 40.44 P
ATOM 3 OP1 U A2009 33.074 134.821 104.864 1.00 41.98 O
ATOM 4 OP2 U A2009 35.224 135.376 103.570 1.00 37.62 O
ATOM 5 O5' U A2009 35.314 134.493 105.906 1.00 40.77 O
ATOM 6 C5' U A2009 36.432 135.373 106.125 1.00 39.21 C
ATOM 7 C4' U A2009 36.806 135.386 107.590 1.00 39.02 C
ATOM 8 O4' U A2009 35.696 135.921 108.362 1.00 39.23 O
ATOM 9 C3' U A2009 37.067 134.024 108.209 1.00 39.08 C
ATOM 10 O3' U A2009 38.387 133.554 107.958 1.00 39.41 O
ATOM 11 C2' U A2009 36.792 134.283 109.685 1.00 38.72 C
ATOM 12 O2' U A2009 37.856 134.931 110.353 1.00 36.91 O
ATOM 13 C1' U A2009 35.593 135.232 109.600 1.00 38.39 C
ATOM 14 N1 U A2009 34.297 134.531 109.640 1.00 37.70 N
ATOM 15 C2 U A2009 33.761 134.239 110.875 1.00 39.85 C
ATOM 16 O2 U A2009 34.300 134.546 111.922 1.00 44.03 O
ATOM 17 N3 U A2009 32.561 133.571 110.847 1.00 41.67 N
ATOM 18 C4 U A2009 31.851 133.177 109.734 1.00 41.22 C
ATOM 19 O4 U A2009 30.801 132.534 109.871 1.00 38.81 O
ATOM 20 C5 U A2009 32.469 133.526 108.494 1.00 41.06 C
ATOM 21 C6 U A2009 33.641 134.171 108.491 1.00 38.24 C
ATOM 22 P U A2010 38.601 132.212 107.105 1.00 41.67 P
ATOM 23 OP1 U A2010 39.323 132.620 105.891 1.00 39.92 O
ATOM 24 OP2 U A2010 37.319 131.491 106.983 1.00 43.36 O
ATOM 25 O5' U A2010 39.526 131.291 108.011 1.00 39.66 O
TER

ATOM 1 O3' C B 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 2 P G B 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 3 OP1 G B 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 4 OP2 G B 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 5 O5' G B 523 26.877 129.411 109.249 1.00 56.85 O
ATOM 6 C5' G B 523 27.019 129.890 107.911 1.00 53.37 C
ATOM 7 C4' G B 523 28.252 129.315 107.271 1.00 51.77 C
ATOM 8 O4' G B 523 29.432 129.885 107.891 1.00 51.59 O
ATOM 9 C3' G B 523 28.438 127.804 107.354 1.00 51.42 C
ATOM 10 O3' G B 523 29.046 127.446 106.125 1.00 52.85 O
ATOM 11 C2' G B 523 29.471 127.665 108.473 1.00 49.75 C
ATOM 12 O2' G B 523 30.246 126.493 108.407 1.00 50.38 O
ATOM 13 C1' G B 523 30.352 128.852 108.139 1.00 50.19 C
ATOM 14 N9 G B 523 31.337 129.323 109.102 1.00 50.30 N
ATOM 15 C8 G B 523 31.224 129.434 110.465 1.00 50.88 C
ATOM 16 N7 G B 523 32.276 129.974 111.018 1.00 49.64 N
ATOM 17 C5 G B 523 33.132 130.220 109.956 1.00 48.34 C
ATOM 18 C6 G B 523 34.404 130.818 109.927 1.00 47.90 C
ATOM 19 O6 G B 523 35.047 131.297 110.860 1.00 48.94 O
ATOM 20 N1 G B 523 34.925 130.844 108.642 1.00 46.97 N
ATOM 21 C2 G B 523 34.295 130.367 107.528 1.00 46.78 C
ATOM 22 N2 G B 523 34.970 130.443 106.381 1.00 48.91 N
ATOM 23 N3 G B 523 33.096 129.842 107.537 1.00 46.92 N
ATOM 24 C4 G B 523 32.577 129.797 108.775 1.00 48.72 C
ATOM 25 P A B 524 28.551 126.148 105.336 1.00 55.70 P
ATOM 26 OP1 A B 524 27.138 126.359 104.932 1.00 55.39 O
ATOM 27 OP2 A B 524 28.912 124.951 106.143 1.00 54.21 O
ATOM 28 O5' A B 524 29.476 126.148 104.039 1.00 54.96 O
TER

Atoms:
C4: (31.851,133.177,109.734)
N3: (32.561,133.571,110.847)
OP1: (33.074,134.821,104.864)
OP2: (35.224,135.376,103.570)
C2: (33.761,134.239,110.875)
C1': (35.593,135.232,109.600)
C3': (37.067,134.024,108.209)
O5': (35.314,134.493,105.906)
O4': (35.696,135.921,108.362)
C5': (36.432,135.373,106.125)
P: (34.490,134.522,104.543)
C4': (36.806,135.386,107.590)
C2': (36.792,134.283,109.685)
O2': (37.856,134.931,110.353)
N1: (34.297,134.531,109.640)
O4: (30.801,132.534,109.871)
O2: (34.300,134.546,111.922)
C6: (33.641,134.171,108.491)
C5: (32.469,133.526,108.494)
O3': (38.387,133.554,107.958)
OP1: (24.403,129.236,109.349)
OP2: (25.799,129.397,111.518)
C3': (28.438,127.804,107.354)
C1': (30.352,128.852,108.139)
C5': (27.019,129.890,107.911)
O6: (35.047,131.297,110.860)
O4': (29.432,129.885,107.891)
C8: (31.224,129.434,110.465)
C2: (34.295,130.367,107.528)
C6: (34.404,130.818,109.927)
C5: (33.132,130.220,109.956)
C4: (32.577,129.797,108.775)
P: (25.578,129.781,110.087)
C4': (28.252,129.315,107.271)
C2': (29.471,127.665,108.473)
O2': (30.246,126.493,108.407)
N1: (34.925,130.844,108.642)
N2: (34.970,130.443,106.381)
N3: (33.096,129.842,107.537)
N7: (32.276,129.974,111.018)
N9: (31.337,129.323,109.102)
O5': (26.877,129.411,109.249)
O3': (29.046,127.446,106.125)
Image (generated by PyMOL):
PyMOL image
show in jmol