ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZJR:X24:X25

Extra

PDB:
ATOM 1 O3' G A 23 0.388 113.605 123.899 1.00 6.70 O
ATOM 2 P U A 24 0.609 115.063 123.299 1.00 8.13 P
ATOM 3 OP1 U A 24 0.380 116.075 124.381 1.00 4.77 O
ATOM 4 OP2 U A 24 -0.129 115.166 122.010 1.00 5.94 O
ATOM 5 O5' U A 24 2.129 115.072 122.858 1.00 3.98 O
ATOM 6 C5' U A 24 3.110 115.715 123.636 1.00 3.40 C
ATOM 7 C4' U A 24 4.439 115.543 122.976 1.00 4.49 C
ATOM 8 O4' U A 24 4.466 114.229 122.361 1.00 3.72 O
ATOM 9 C3' U A 24 4.734 116.500 121.846 1.00 4.27 C
ATOM 10 O3' U A 24 5.312 117.666 122.449 1.00 4.85 O
ATOM 11 C2' U A 24 5.775 115.705 121.063 1.00 5.42 C
ATOM 12 O2' U A 24 7.046 115.755 121.693 1.00 10.24 O
ATOM 13 C1' U A 24 5.272 114.261 121.216 1.00 5.93 C
ATOM 14 N1 U A 24 4.510 113.720 120.081 1.00 7.45 N
ATOM 15 C2 U A 24 5.206 113.243 119.002 1.00 9.46 C
ATOM 16 O2 U A 24 6.404 113.160 118.984 1.00 13.16 O
ATOM 17 N3 U A 24 4.442 112.858 117.934 1.00 10.47 N
ATOM 18 C4 U A 24 3.073 112.891 117.843 1.00 10.51 C
ATOM 19 O4 U A 24 2.526 112.607 116.780 1.00 12.34 O
ATOM 20 C5 U A 24 2.422 113.341 119.013 1.00 10.66 C
ATOM 21 C6 U A 24 3.143 113.725 120.072 1.00 11.22 C
ATOM 22 P G A 25 4.623 119.115 122.277 1.00 2.35 P
ATOM 23 OP1 G A 25 5.123 120.136 123.216 1.00 5.69 O
ATOM 24 OP2 G A 25 3.162 118.938 122.155 1.00 7.56 O
ATOM 25 O5' G A 25 5.205 119.552 120.871 1.00 4.77 O
TER

ATOM 1 O3' U B 24 5.312 117.666 122.449 1.00 4.85 O
ATOM 2 P G B 25 4.623 119.115 122.277 1.00 2.35 P
ATOM 3 OP1 G B 25 5.123 120.136 123.216 1.00 5.69 O
ATOM 4 OP2 G B 25 3.162 118.938 122.155 1.00 7.56 O
ATOM 5 O5' G B 25 5.205 119.552 120.871 1.00 4.77 O
ATOM 6 C5' G B 25 6.568 119.400 120.562 1.00 2.35 C
ATOM 7 C4' G B 25 6.725 119.317 119.071 1.00 2.78 C
ATOM 8 O4' G B 25 6.318 118.008 118.628 1.00 3.01 O
ATOM 9 C3' G B 25 5.888 120.304 118.275 1.00 3.74 C
ATOM 10 O3' G B 25 6.653 121.473 118.053 1.00 8.33 O
ATOM 11 C2' G B 25 5.729 119.579 116.959 1.00 5.74 C
ATOM 12 O2' G B 25 6.876 119.671 116.155 1.00 7.25 O
ATOM 13 C1' G B 25 5.622 118.126 117.412 1.00 6.33 C
ATOM 14 N9 G B 25 4.250 117.663 117.607 1.00 7.19 N
ATOM 15 C8 G B 25 3.394 117.988 118.629 1.00 5.84 C
ATOM 16 N7 G B 25 2.267 117.352 118.563 1.00 5.74 N
ATOM 17 C5 G B 25 2.373 116.582 117.418 1.00 6.25 C
ATOM 18 C6 G B 25 1.441 115.717 116.826 1.00 6.99 C
ATOM 19 O6 G B 25 0.303 115.467 117.198 1.00 8.74 O
ATOM 20 N1 G B 25 1.932 115.141 115.662 1.00 8.28 N
ATOM 21 C2 G B 25 3.168 115.419 115.106 1.00 10.71 C
ATOM 22 N2 G B 25 3.456 114.808 113.937 1.00 9.64 N
ATOM 23 N3 G B 25 4.047 116.250 115.653 1.00 8.51 N
ATOM 24 C4 G B 25 3.581 116.783 116.806 1.00 6.67 C
ATOM 25 P G B 26 5.955 122.913 118.032 1.00 11.06 P
ATOM 26 OP1 G B 26 7.007 123.918 118.135 1.00 13.85 O
ATOM 27 OP2 G B 26 4.782 123.009 118.926 1.00 12.11 O
ATOM 28 O5' G B 26 5.462 123.045 116.542 1.00 13.98 O
TER

Atoms:
C4: (3.073,112.891,117.843)
N3: (4.442,112.858,117.934)
OP1: (0.380,116.075,124.381)
OP2: (-0.129,115.166,122.010)
C2: (5.206,113.243,119.002)
C1': (5.272,114.261,121.216)
C3': (4.734,116.500,121.846)
O5': (2.129,115.072,122.858)
O4': (4.466,114.229,122.361)
C5': (3.110,115.715,123.636)
P: (0.609,115.063,123.299)
C4': (4.439,115.543,122.976)
C2': (5.775,115.705,121.063)
O2': (7.046,115.755,121.693)
N1: (4.510,113.720,120.081)
O4: (2.526,112.607,116.780)
O2: (6.404,113.160,118.984)
C6: (3.143,113.725,120.072)
C5: (2.422,113.341,119.013)
O3': (5.312,117.666,122.449)
OP1: (5.123,120.136,123.216)
OP2: (3.162,118.938,122.155)
C3': (5.888,120.304,118.275)
C1': (5.622,118.126,117.412)
C5': (6.568,119.400,120.562)
O6: (0.303,115.467,117.198)
O4': (6.318,118.008,118.628)
C8: (3.394,117.988,118.629)
C2: (3.168,115.419,115.106)
C6: (1.441,115.717,116.826)
C5: (2.373,116.582,117.418)
C4: (3.581,116.783,116.806)
P: (4.623,119.115,122.277)
C4': (6.725,119.317,119.071)
C2': (5.729,119.579,116.959)
O2': (6.876,119.671,116.155)
N1: (1.932,115.141,115.662)
N2: (3.456,114.808,113.937)
N3: (4.047,116.250,115.653)
N7: (2.267,117.352,118.563)
N9: (4.250,117.663,117.607)
O5': (5.205,119.552,120.871)
O3': (6.653,121.473,118.053)
Image (generated by PyMOL):
PyMOL image
show in jmol