Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A498:A499
Extra
PDB:
ATOM 1 O3' G A 497 -2.325 147.613 227.464 1.00 12.22 O
ATOM 2 P U A 498 -3.421 148.771 227.445 1.00 7.45 P
ATOM 3 OP1 U A 498 -2.937 149.862 228.345 1.00 7.45 O
ATOM 4 OP2 U A 498 -4.733 148.124 227.730 1.00 7.45 O
ATOM 5 O5' U A 498 -3.378 149.252 225.938 1.00 7.45 O
ATOM 6 C5' U A 498 -2.333 150.063 225.461 1.00 7.45 C
ATOM 7 C4' U A 498 -2.823 150.934 224.355 1.00 7.45 C
ATOM 8 O4' U A 498 -3.185 150.101 223.205 1.00 7.45 O
ATOM 9 C3' U A 498 -4.096 151.722 224.657 1.00 7.45 C
ATOM 10 O3' U A 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 11 C2' U A 498 -4.659 151.975 223.257 1.00 7.45 C
ATOM 12 O2' U A 498 -3.971 153.045 222.607 1.00 7.45 O
ATOM 13 C1' U A 498 -4.314 150.650 222.549 1.00 7.45 C
ATOM 14 N1 U A 498 -5.426 149.695 222.645 1.00 7.07 N
ATOM 15 C2 U A 498 -6.229 149.540 221.568 1.00 7.07 C
ATOM 16 O2 U A 498 -6.012 150.125 220.524 1.00 7.07 O
ATOM 17 N3 U A 498 -7.278 148.677 221.729 1.00 7.07 N
ATOM 18 C4 U A 498 -7.627 147.963 222.848 1.00 7.07 C
ATOM 19 O4 U A 498 -8.619 147.211 222.854 1.00 7.07 O
ATOM 20 C5 U A 498 -6.737 148.206 223.935 1.00 7.07 C
ATOM 21 C6 U A 498 -5.709 149.046 223.795 1.00 7.07 C
ATOM 22 P G A 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 23 OP1 G A 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 24 OP2 G A 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 25 O5' G A 499 -6.118 153.798 224.824 1.00 7.91 O
TER
ATOM 1 O3' U B 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 2 P G B 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 3 OP1 G B 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 4 OP2 G B 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 5 O5' G B 499 -6.118 153.798 224.824 1.00 7.91 O
ATOM 6 C5' G B 499 -6.259 154.984 224.081 1.00 7.91 C
ATOM 7 C4' G B 499 -7.458 154.915 223.204 1.00 7.91 C
ATOM 8 O4' G B 499 -7.463 153.649 222.508 1.00 7.91 O
ATOM 9 C3' G B 499 -8.781 154.940 223.924 1.00 7.91 C
ATOM 10 O3' G B 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 11 C2' G B 499 -9.704 154.244 222.943 1.00 7.91 C
ATOM 12 O2' G B 499 -10.071 155.105 221.879 1.00 7.91 O
ATOM 13 C1' G B 499 -8.778 153.163 222.406 1.00 7.91 C
ATOM 14 N9 G B 499 -8.877 151.962 223.220 1.00 8.00 N
ATOM 15 C8 G B 499 -8.124 151.628 224.302 1.00 8.00 C
ATOM 16 N7 G B 499 -8.534 150.509 224.827 1.00 8.00 N
ATOM 17 C5 G B 499 -9.615 150.119 224.051 1.00 8.00 C
ATOM 18 C6 G B 499 -10.449 149.001 224.138 1.00 8.00 C
ATOM 19 O6 G B 499 -10.401 148.096 224.946 1.00 8.00 O
ATOM 20 N1 G B 499 -11.410 149.004 223.155 1.00 8.00 N
ATOM 21 C2 G B 499 -11.556 149.977 222.195 1.00 8.00 C
ATOM 22 N2 G B 499 -12.566 149.808 221.322 1.00 8.00 N
ATOM 23 N3 G B 499 -10.777 151.040 222.090 1.00 8.00 N
ATOM 24 C4 G B 499 -9.842 151.024 223.053 1.00 8.00 C
ATOM 25 P A B 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 26 OP1 A B 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 27 OP2 A B 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 28 O5' A B 500 -11.203 156.376 225.727 1.00 0.40 O
TER
ATOM 2 P U A 498 -3.421 148.771 227.445 1.00 7.45 P
ATOM 3 OP1 U A 498 -2.937 149.862 228.345 1.00 7.45 O
ATOM 4 OP2 U A 498 -4.733 148.124 227.730 1.00 7.45 O
ATOM 5 O5' U A 498 -3.378 149.252 225.938 1.00 7.45 O
ATOM 6 C5' U A 498 -2.333 150.063 225.461 1.00 7.45 C
ATOM 7 C4' U A 498 -2.823 150.934 224.355 1.00 7.45 C
ATOM 8 O4' U A 498 -3.185 150.101 223.205 1.00 7.45 O
ATOM 9 C3' U A 498 -4.096 151.722 224.657 1.00 7.45 C
ATOM 10 O3' U A 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 11 C2' U A 498 -4.659 151.975 223.257 1.00 7.45 C
ATOM 12 O2' U A 498 -3.971 153.045 222.607 1.00 7.45 O
ATOM 13 C1' U A 498 -4.314 150.650 222.549 1.00 7.45 C
ATOM 14 N1 U A 498 -5.426 149.695 222.645 1.00 7.07 N
ATOM 15 C2 U A 498 -6.229 149.540 221.568 1.00 7.07 C
ATOM 16 O2 U A 498 -6.012 150.125 220.524 1.00 7.07 O
ATOM 17 N3 U A 498 -7.278 148.677 221.729 1.00 7.07 N
ATOM 18 C4 U A 498 -7.627 147.963 222.848 1.00 7.07 C
ATOM 19 O4 U A 498 -8.619 147.211 222.854 1.00 7.07 O
ATOM 20 C5 U A 498 -6.737 148.206 223.935 1.00 7.07 C
ATOM 21 C6 U A 498 -5.709 149.046 223.795 1.00 7.07 C
ATOM 22 P G A 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 23 OP1 G A 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 24 OP2 G A 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 25 O5' G A 499 -6.118 153.798 224.824 1.00 7.91 O
TER
ATOM 1 O3' U B 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 2 P G B 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 3 OP1 G B 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 4 OP2 G B 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 5 O5' G B 499 -6.118 153.798 224.824 1.00 7.91 O
ATOM 6 C5' G B 499 -6.259 154.984 224.081 1.00 7.91 C
ATOM 7 C4' G B 499 -7.458 154.915 223.204 1.00 7.91 C
ATOM 8 O4' G B 499 -7.463 153.649 222.508 1.00 7.91 O
ATOM 9 C3' G B 499 -8.781 154.940 223.924 1.00 7.91 C
ATOM 10 O3' G B 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 11 C2' G B 499 -9.704 154.244 222.943 1.00 7.91 C
ATOM 12 O2' G B 499 -10.071 155.105 221.879 1.00 7.91 O
ATOM 13 C1' G B 499 -8.778 153.163 222.406 1.00 7.91 C
ATOM 14 N9 G B 499 -8.877 151.962 223.220 1.00 8.00 N
ATOM 15 C8 G B 499 -8.124 151.628 224.302 1.00 8.00 C
ATOM 16 N7 G B 499 -8.534 150.509 224.827 1.00 8.00 N
ATOM 17 C5 G B 499 -9.615 150.119 224.051 1.00 8.00 C
ATOM 18 C6 G B 499 -10.449 149.001 224.138 1.00 8.00 C
ATOM 19 O6 G B 499 -10.401 148.096 224.946 1.00 8.00 O
ATOM 20 N1 G B 499 -11.410 149.004 223.155 1.00 8.00 N
ATOM 21 C2 G B 499 -11.556 149.977 222.195 1.00 8.00 C
ATOM 22 N2 G B 499 -12.566 149.808 221.322 1.00 8.00 N
ATOM 23 N3 G B 499 -10.777 151.040 222.090 1.00 8.00 N
ATOM 24 C4 G B 499 -9.842 151.024 223.053 1.00 8.00 C
ATOM 25 P A B 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 26 OP1 A B 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 27 OP2 A B 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 28 O5' A B 500 -11.203 156.376 225.727 1.00 0.40 O
TER
Atoms:
C4: (-7.627,147.963,222.848)
N3: (-7.278,148.677,221.729)
OP1: (-2.937,149.862,228.345)
OP2: (-4.733,148.124,227.730)
C2: (-6.229,149.540,221.568)
C1': (-4.314,150.650,222.549)
C3': (-4.096,151.722,224.657)
O5': (-3.378,149.252,225.938)
O4': (-3.185,150.101,223.205)
C5': (-2.333,150.063,225.461)
P: (-3.421,148.771,227.445)
C4': (-2.823,150.934,224.355)
C2': (-4.659,151.975,223.257)
O2': (-3.971,153.045,222.607)
N1: (-5.426,149.695,222.645)
O4: (-8.619,147.211,222.854)
O2: (-6.012,150.125,220.524)
C6: (-5.709,149.046,223.795)
C5: (-6.737,148.206,223.935)
O3': (-3.861,152.903,225.409)
N3: (-7.278,148.677,221.729)
OP1: (-2.937,149.862,228.345)
OP2: (-4.733,148.124,227.730)
C2: (-6.229,149.540,221.568)
C1': (-4.314,150.650,222.549)
C3': (-4.096,151.722,224.657)
O5': (-3.378,149.252,225.938)
O4': (-3.185,150.101,223.205)
C5': (-2.333,150.063,225.461)
P: (-3.421,148.771,227.445)
C4': (-2.823,150.934,224.355)
C2': (-4.659,151.975,223.257)
O2': (-3.971,153.045,222.607)
N1: (-5.426,149.695,222.645)
O4: (-8.619,147.211,222.854)
O2: (-6.012,150.125,220.524)
C6: (-5.709,149.046,223.795)
C5: (-6.737,148.206,223.935)
O3': (-3.861,152.903,225.409)
OP1: (-4.616,155.112,226.298)
OP2: (-5.662,152.940,227.143)
C3': (-8.781,154.940,223.924)
C1': (-8.778,153.163,222.406)
C5': (-6.259,154.984,224.081)
O6: (-10.401,148.096,224.946)
O4': (-7.463,153.649,222.508)
C8: (-8.124,151.628,224.302)
C2: (-11.556,149.977,222.195)
C6: (-10.449,149.001,224.138)
C5: (-9.615,150.119,224.051)
C4: (-9.842,151.024,223.053)
P: (-5.096,153.741,226.024)
C4': (-7.458,154.915,223.204)
C2': (-9.704,154.244,222.943)
O2': (-10.071,155.105,221.879)
N1: (-11.410,149.004,223.155)
N2: (-12.566,149.808,221.322)
N3: (-10.777,151.040,222.090)
N7: (-8.534,150.509,224.827)
N9: (-8.877,151.962,223.220)
O5': (-6.118,153.798,224.824)
O3': (-9.188,156.241,224.269)
OP2: (-5.662,152.940,227.143)
C3': (-8.781,154.940,223.924)
C1': (-8.778,153.163,222.406)
C5': (-6.259,154.984,224.081)
O6: (-10.401,148.096,224.946)
O4': (-7.463,153.649,222.508)
C8: (-8.124,151.628,224.302)
C2: (-11.556,149.977,222.195)
C6: (-10.449,149.001,224.138)
C5: (-9.615,150.119,224.051)
C4: (-9.842,151.024,223.053)
P: (-5.096,153.741,226.024)
C4': (-7.458,154.915,223.204)
C2': (-9.704,154.244,222.943)
O2': (-10.071,155.105,221.879)
N1: (-11.410,149.004,223.155)
N2: (-12.566,149.808,221.322)
N3: (-10.777,151.040,222.090)
N7: (-8.534,150.509,224.827)
N9: (-8.877,151.962,223.220)
O5': (-6.118,153.798,224.824)
O3': (-9.188,156.241,224.269)
Image (generated by PyMOL):