Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A407:A408
Extra
PDB:
ATOM 1 O3' A A 406 -107.519 39.425 -85.401 1.00 54.75 O
ATOM 2 P U A 407 -108.629 39.698 -84.279 1.00 62.09 P
ATOM 3 OP1 U A 407 -108.092 40.740 -83.378 1.00 62.09 O
ATOM 4 OP2 U A 407 -109.002 38.380 -83.704 1.00 62.09 O
ATOM 5 O5' U A 407 -109.840 40.282 -85.129 1.00 62.09 O
ATOM 6 C5' U A 407 -109.986 39.959 -86.502 1.00 62.09 C
ATOM 7 C4' U A 407 -111.266 39.215 -86.755 1.00 62.09 C
ATOM 8 O4' U A 407 -110.989 37.815 -86.970 1.00 62.09 O
ATOM 9 C3' U A 407 -112.267 39.208 -85.619 1.00 62.09 C
ATOM 10 O3' U A 407 -113.007 40.407 -85.527 1.00 62.09 O
ATOM 11 C2' U A 407 -113.120 37.985 -85.925 1.00 62.09 C
ATOM 12 O2' U A 407 -114.130 38.283 -86.871 1.00 62.09 O
ATOM 13 C1' U A 407 -112.103 37.047 -86.571 1.00 62.09 C
ATOM 14 N1 U A 407 -111.658 36.017 -85.638 1.00 62.89 N
ATOM 15 C2 U A 407 -112.265 34.785 -85.774 1.00 62.89 C
ATOM 16 O2 U A 407 -113.104 34.538 -86.627 1.00 62.89 O
ATOM 17 N3 U A 407 -111.833 33.860 -84.867 1.00 62.89 N
ATOM 18 C4 U A 407 -110.894 34.054 -83.867 1.00 62.89 C
ATOM 19 O4 U A 407 -110.618 33.098 -83.128 1.00 62.89 O
ATOM 20 C5 U A 407 -110.322 35.370 -83.790 1.00 62.89 C
ATOM 21 C6 U A 407 -110.725 36.289 -84.667 1.00 62.89 C
ATOM 22 P G A 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 23 OP1 G A 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 24 OP2 G A 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 25 O5' G A 408 -114.904 39.405 -84.286 1.00 37.29 O
TER
ATOM 1 O3' U B 407 -113.007 40.407 -85.527 1.00 62.09 O
ATOM 2 P G B 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 3 OP1 G B 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 4 OP2 G B 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 5 O5' G B 408 -114.904 39.405 -84.286 1.00 37.29 O
ATOM 6 C5' G B 408 -116.237 39.526 -83.886 1.00 37.29 C
ATOM 7 C4' G B 408 -116.892 38.190 -83.823 1.00 37.29 C
ATOM 8 O4' G B 408 -116.012 37.194 -84.416 1.00 37.29 O
ATOM 9 C3' G B 408 -117.139 37.658 -82.429 1.00 37.29 C
ATOM 10 O3' G B 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 11 C2' G B 408 -117.211 36.162 -82.672 1.00 37.29 C
ATOM 12 O2' G B 408 -118.418 35.806 -83.343 1.00 37.29 O
ATOM 13 C1' G B 408 -116.045 36.012 -83.636 1.00 37.29 C
ATOM 14 N9 G B 408 -114.759 35.919 -82.909 1.00 38.55 N
ATOM 15 C8 G B 408 -113.894 36.970 -82.624 1.00 38.55 C
ATOM 16 N7 G B 408 -112.814 36.622 -81.958 1.00 38.55 N
ATOM 17 C5 G B 408 -112.977 35.246 -81.780 1.00 38.55 C
ATOM 18 C6 G B 408 -112.146 34.293 -81.132 1.00 38.55 C
ATOM 19 O6 G B 408 -111.060 34.468 -80.574 1.00 38.55 O
ATOM 20 N1 G B 408 -112.685 33.018 -81.179 1.00 38.55 N
ATOM 21 C2 G B 408 -113.871 32.675 -81.770 1.00 38.55 C
ATOM 22 N2 G B 408 -114.212 31.375 -81.707 1.00 38.55 N
ATOM 23 N3 G B 408 -114.663 33.547 -82.374 1.00 38.55 N
ATOM 24 C4 G B 408 -114.167 34.804 -82.349 1.00 38.55 C
ATOM 25 P A B 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 26 OP1 A B 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 27 OP2 A B 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 28 O5' A B 409 -120.108 39.818 -81.569 1.00 62.47 O
TER
ATOM 2 P U A 407 -108.629 39.698 -84.279 1.00 62.09 P
ATOM 3 OP1 U A 407 -108.092 40.740 -83.378 1.00 62.09 O
ATOM 4 OP2 U A 407 -109.002 38.380 -83.704 1.00 62.09 O
ATOM 5 O5' U A 407 -109.840 40.282 -85.129 1.00 62.09 O
ATOM 6 C5' U A 407 -109.986 39.959 -86.502 1.00 62.09 C
ATOM 7 C4' U A 407 -111.266 39.215 -86.755 1.00 62.09 C
ATOM 8 O4' U A 407 -110.989 37.815 -86.970 1.00 62.09 O
ATOM 9 C3' U A 407 -112.267 39.208 -85.619 1.00 62.09 C
ATOM 10 O3' U A 407 -113.007 40.407 -85.527 1.00 62.09 O
ATOM 11 C2' U A 407 -113.120 37.985 -85.925 1.00 62.09 C
ATOM 12 O2' U A 407 -114.130 38.283 -86.871 1.00 62.09 O
ATOM 13 C1' U A 407 -112.103 37.047 -86.571 1.00 62.09 C
ATOM 14 N1 U A 407 -111.658 36.017 -85.638 1.00 62.89 N
ATOM 15 C2 U A 407 -112.265 34.785 -85.774 1.00 62.89 C
ATOM 16 O2 U A 407 -113.104 34.538 -86.627 1.00 62.89 O
ATOM 17 N3 U A 407 -111.833 33.860 -84.867 1.00 62.89 N
ATOM 18 C4 U A 407 -110.894 34.054 -83.867 1.00 62.89 C
ATOM 19 O4 U A 407 -110.618 33.098 -83.128 1.00 62.89 O
ATOM 20 C5 U A 407 -110.322 35.370 -83.790 1.00 62.89 C
ATOM 21 C6 U A 407 -110.725 36.289 -84.667 1.00 62.89 C
ATOM 22 P G A 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 23 OP1 G A 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 24 OP2 G A 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 25 O5' G A 408 -114.904 39.405 -84.286 1.00 37.29 O
TER
ATOM 1 O3' U B 407 -113.007 40.407 -85.527 1.00 62.09 O
ATOM 2 P G B 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 3 OP1 G B 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 4 OP2 G B 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 5 O5' G B 408 -114.904 39.405 -84.286 1.00 37.29 O
ATOM 6 C5' G B 408 -116.237 39.526 -83.886 1.00 37.29 C
ATOM 7 C4' G B 408 -116.892 38.190 -83.823 1.00 37.29 C
ATOM 8 O4' G B 408 -116.012 37.194 -84.416 1.00 37.29 O
ATOM 9 C3' G B 408 -117.139 37.658 -82.429 1.00 37.29 C
ATOM 10 O3' G B 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 11 C2' G B 408 -117.211 36.162 -82.672 1.00 37.29 C
ATOM 12 O2' G B 408 -118.418 35.806 -83.343 1.00 37.29 O
ATOM 13 C1' G B 408 -116.045 36.012 -83.636 1.00 37.29 C
ATOM 14 N9 G B 408 -114.759 35.919 -82.909 1.00 38.55 N
ATOM 15 C8 G B 408 -113.894 36.970 -82.624 1.00 38.55 C
ATOM 16 N7 G B 408 -112.814 36.622 -81.958 1.00 38.55 N
ATOM 17 C5 G B 408 -112.977 35.246 -81.780 1.00 38.55 C
ATOM 18 C6 G B 408 -112.146 34.293 -81.132 1.00 38.55 C
ATOM 19 O6 G B 408 -111.060 34.468 -80.574 1.00 38.55 O
ATOM 20 N1 G B 408 -112.685 33.018 -81.179 1.00 38.55 N
ATOM 21 C2 G B 408 -113.871 32.675 -81.770 1.00 38.55 C
ATOM 22 N2 G B 408 -114.212 31.375 -81.707 1.00 38.55 N
ATOM 23 N3 G B 408 -114.663 33.547 -82.374 1.00 38.55 N
ATOM 24 C4 G B 408 -114.167 34.804 -82.349 1.00 38.55 C
ATOM 25 P A B 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 26 OP1 A B 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 27 OP2 A B 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 28 O5' A B 409 -120.108 39.818 -81.569 1.00 62.47 O
TER
Atoms:
C4: (-110.894,34.054,-83.867)
N3: (-111.833,33.860,-84.867)
OP1: (-108.092,40.740,-83.378)
OP2: (-109.002,38.380,-83.704)
C2: (-112.265,34.785,-85.774)
C1': (-112.103,37.047,-86.571)
C3': (-112.267,39.208,-85.619)
O5': (-109.840,40.282,-85.129)
O4': (-110.989,37.815,-86.970)
C5': (-109.986,39.959,-86.502)
P: (-108.629,39.698,-84.279)
C4': (-111.266,39.215,-86.755)
C2': (-113.120,37.985,-85.925)
O2': (-114.130,38.283,-86.871)
N1: (-111.658,36.017,-85.638)
O4: (-110.618,33.098,-83.128)
O2: (-113.104,34.538,-86.627)
C6: (-110.725,36.289,-84.667)
C5: (-110.322,35.370,-83.790)
O3': (-113.007,40.407,-85.527)
N3: (-111.833,33.860,-84.867)
OP1: (-108.092,40.740,-83.378)
OP2: (-109.002,38.380,-83.704)
C2: (-112.265,34.785,-85.774)
C1': (-112.103,37.047,-86.571)
C3': (-112.267,39.208,-85.619)
O5': (-109.840,40.282,-85.129)
O4': (-110.989,37.815,-86.970)
C5': (-109.986,39.959,-86.502)
P: (-108.629,39.698,-84.279)
C4': (-111.266,39.215,-86.755)
C2': (-113.120,37.985,-85.925)
O2': (-114.130,38.283,-86.871)
N1: (-111.658,36.017,-85.638)
O4: (-110.618,33.098,-83.128)
O2: (-113.104,34.538,-86.627)
C6: (-110.725,36.289,-84.667)
C5: (-110.322,35.370,-83.790)
O3': (-113.007,40.407,-85.527)
OP1: (-114.718,41.882,-84.516)
OP2: (-113.093,40.608,-83.062)
C3': (-117.139,37.658,-82.429)
C1': (-116.045,36.012,-83.636)
C5': (-116.237,39.526,-83.886)
O6: (-111.060,34.468,-80.574)
O4': (-116.012,37.194,-84.416)
C8: (-113.894,36.970,-82.624)
C2: (-113.871,32.675,-81.770)
C6: (-112.146,34.293,-81.132)
C5: (-112.977,35.246,-81.780)
C4: (-114.167,34.804,-82.349)
P: (-113.949,40.660,-84.257)
C4': (-116.892,38.190,-83.823)
C2': (-117.211,36.162,-82.672)
O2': (-118.418,35.806,-83.343)
N1: (-112.685,33.018,-81.179)
N2: (-114.212,31.375,-81.707)
N3: (-114.663,33.547,-82.374)
N7: (-112.814,36.622,-81.958)
N9: (-114.759,35.919,-82.909)
O5': (-114.904,39.405,-84.286)
O3': (-118.278,38.203,-81.810)
OP2: (-113.093,40.608,-83.062)
C3': (-117.139,37.658,-82.429)
C1': (-116.045,36.012,-83.636)
C5': (-116.237,39.526,-83.886)
O6: (-111.060,34.468,-80.574)
O4': (-116.012,37.194,-84.416)
C8: (-113.894,36.970,-82.624)
C2: (-113.871,32.675,-81.770)
C6: (-112.146,34.293,-81.132)
C5: (-112.977,35.246,-81.780)
C4: (-114.167,34.804,-82.349)
P: (-113.949,40.660,-84.257)
C4': (-116.892,38.190,-83.823)
C2': (-117.211,36.162,-82.672)
O2': (-118.418,35.806,-83.343)
N1: (-112.685,33.018,-81.179)
N2: (-114.212,31.375,-81.707)
N3: (-114.663,33.547,-82.374)
N7: (-112.814,36.622,-81.958)
N9: (-114.759,35.919,-82.909)
O5': (-114.904,39.405,-84.286)
O3': (-118.278,38.203,-81.810)
Image (generated by PyMOL):