ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QWY:A39:A7

Extra

PDB:
ATOM 1 O3' G A 38 -0.706 40.787 53.445 1.00 59.20 O
ATOM 2 P U A 39 -1.599 39.602 54.126 1.00 56.47 P
ATOM 3 OP1 U A 39 -3.004 39.999 53.874 1.00 58.19 O
ATOM 4 OP2 U A 39 -1.160 39.317 55.525 1.00 54.80 O
ATOM 5 O5' U A 39 -1.371 38.302 53.245 1.00 55.95 O
ATOM 6 C5' U A 39 -1.812 37.034 53.718 1.00 55.43 C
ATOM 7 C4' U A 39 -2.982 36.549 52.905 1.00 54.71 C
ATOM 8 O4' U A 39 -2.742 35.169 52.519 1.00 54.93 O
ATOM 9 C3' U A 39 -4.307 36.529 53.647 1.00 54.99 C
ATOM 10 O3' U A 39 -5.363 36.652 52.705 1.00 57.21 O
ATOM 11 C2' U A 39 -4.307 35.144 54.280 1.00 53.49 C
ATOM 12 O2' U A 39 -5.602 34.648 54.520 1.00 53.75 O
ATOM 13 C1' U A 39 -3.665 34.317 53.174 1.00 54.07 C
ATOM 14 N1 U A 39 -2.937 33.133 53.656 1.00 54.14 N
ATOM 15 C2 U A 39 -3.485 31.892 53.401 1.00 51.99 C
ATOM 16 O2 U A 39 -4.562 31.753 52.881 1.00 52.24 O
ATOM 17 N3 U A 39 -2.724 30.824 53.795 1.00 51.15 N
ATOM 18 C4 U A 39 -1.504 30.871 54.432 1.00 52.19 C
ATOM 19 O4 U A 39 -0.904 29.822 54.676 1.00 52.40 O
ATOM 20 C5 U A 39 -1.028 32.190 54.706 1.00 52.91 C
ATOM 21 C6 U A 39 -1.741 33.250 54.316 1.00 53.97 C
ATOM 22 P A A 40 -6.710 37.431 53.104 1.00 58.89 P
ATOM 23 OP1 A A 40 -6.562 38.826 52.614 1.00 58.50 O
ATOM 24 OP2 A A 40 -7.038 37.180 54.546 1.00 55.76 O
ATOM 25 O5' A A 40 -7.800 36.713 52.199 1.00 58.92 O
TER

ATOM 1 O3' C B 6 2.664 36.118 56.886 1.00 38.58 O
ATOM 2 P G B 7 1.936 35.720 58.247 1.00 42.00 P
ATOM 3 OP1 G B 7 1.927 36.956 59.061 1.00 38.47 O
ATOM 4 OP2 G B 7 2.563 34.485 58.780 1.00 41.25 O
ATOM 5 O5' G B 7 0.458 35.310 57.814 1.00 43.41 O
ATOM 6 C5' G B 7 -0.427 36.243 57.189 1.00 45.59 C
ATOM 7 C4' G B 7 -1.864 35.893 57.503 1.00 47.15 C
ATOM 8 O4' G B 7 -2.222 34.610 56.904 1.00 46.35 O
ATOM 9 C3' G B 7 -2.172 35.760 58.994 1.00 48.46 C
ATOM 10 O3' G B 7 -3.372 36.455 59.313 1.00 51.14 O
ATOM 11 C2' G B 7 -2.329 34.255 59.174 1.00 46.97 C
ATOM 12 O2' G B 7 -3.150 33.861 60.245 1.00 43.61 O
ATOM 13 C1' G B 7 -2.960 33.871 57.845 1.00 47.37 C
ATOM 14 N9 G B 7 -2.819 32.449 57.568 1.00 50.30 N
ATOM 15 C8 G B 7 -1.770 31.633 57.919 1.00 52.05 C
ATOM 16 N7 G B 7 -1.969 30.380 57.615 1.00 51.04 N
ATOM 17 C5 G B 7 -3.216 30.374 57.012 1.00 53.87 C
ATOM 18 C6 G B 7 -3.975 29.298 56.485 1.00 55.81 C
ATOM 19 O6 G B 7 -3.683 28.085 56.453 1.00 56.49 O
ATOM 20 N1 G B 7 -5.189 29.744 55.960 1.00 55.13 N
ATOM 21 C2 G B 7 -5.611 31.051 55.942 1.00 53.51 C
ATOM 22 N2 G B 7 -6.804 31.279 55.392 1.00 55.21 N
ATOM 23 N3 G B 7 -4.914 32.058 56.430 1.00 53.07 N
ATOM 24 C4 G B 7 -3.739 31.651 56.951 1.00 52.71 C
ATOM 25 P A B 8 -3.597 37.012 60.803 1.00 54.42 P
ATOM 26 OP1 A B 8 -3.394 38.489 60.798 1.00 52.70 O
ATOM 27 OP2 A B 8 -2.835 36.144 61.759 1.00 51.84 O
ATOM 28 O5' A B 8 -5.147 36.795 61.060 1.00 55.36 O
TER

Atoms:
C4: (-1.504,30.871,54.432)
N3: (-2.724,30.824,53.795)
OP1: (-3.004,39.999,53.874)
OP2: (-1.160,39.317,55.525)
C2: (-3.485,31.892,53.401)
C1': (-3.665,34.317,53.174)
C3': (-4.307,36.529,53.647)
O5': (-1.371,38.302,53.245)
O4': (-2.742,35.169,52.519)
C5': (-1.812,37.034,53.718)
P: (-1.599,39.602,54.126)
C4': (-2.982,36.549,52.905)
C2': (-4.307,35.144,54.280)
O2': (-5.602,34.648,54.520)
N1: (-2.937,33.133,53.656)
O4: (-0.904,29.822,54.676)
O2: (-4.562,31.753,52.881)
C6: (-1.741,33.250,54.316)
C5: (-1.028,32.190,54.706)
O3': (-5.363,36.652,52.705)
OP1: (1.927,36.956,59.061)
OP2: (2.563,34.485,58.780)
C3': (-2.172,35.760,58.994)
C1': (-2.960,33.871,57.845)
C5': (-0.427,36.243,57.189)
O6: (-3.683,28.085,56.453)
O4': (-2.222,34.610,56.904)
C8: (-1.770,31.633,57.919)
C2: (-5.611,31.051,55.942)
C6: (-3.975,29.298,56.485)
C5: (-3.216,30.374,57.012)
C4: (-3.739,31.651,56.951)
P: (1.936,35.720,58.247)
C4': (-1.864,35.893,57.503)
C2': (-2.329,34.255,59.174)
O2': (-3.150,33.861,60.245)
N1: (-5.189,29.744,55.960)
N2: (-6.804,31.279,55.392)
N3: (-4.914,32.058,56.430)
N7: (-1.969,30.380,57.615)
N9: (-2.819,32.449,57.568)
O5': (0.458,35.310,57.814)
O3': (-3.372,36.455,59.313)
Image (generated by PyMOL):
PyMOL image
show in jmol