Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:X29:X30
Extra
PDB:
ATOM 1 O3' C A 28 -6.043 -20.527 3.778 1.00 33.89 O
ATOM 2 P U A 29 -5.977 -20.490 2.178 1.00 35.02 P
ATOM 3 OP1 U A 29 -5.821 -21.884 1.700 1.00 34.96 O
ATOM 4 OP2 U A 29 -5.009 -19.448 1.767 1.00 33.16 O
ATOM 5 O5' U A 29 -7.432 -19.959 1.790 1.00 34.24 O
ATOM 6 C5' U A 29 -8.583 -20.778 1.974 1.00 35.59 C
ATOM 7 C4' U A 29 -9.842 -19.955 1.771 1.00 34.84 C
ATOM 8 O4' U A 29 -9.892 -18.869 2.732 1.00 36.10 O
ATOM 9 C3' U A 29 -9.918 -19.231 0.437 1.00 35.33 C
ATOM 10 O3' U A 29 -10.293 -20.130 -0.602 1.00 34.71 O
ATOM 11 C2' U A 29 -10.987 -18.185 0.749 1.00 34.74 C
ATOM 12 O2' U A 29 -12.302 -18.703 0.744 1.00 34.03 O
ATOM 13 C1' U A 29 -10.597 -17.771 2.167 1.00 34.11 C
ATOM 14 N1 U A 29 -9.726 -16.553 2.187 1.00 33.28 N
ATOM 15 C2 U A 29 -10.292 -15.299 2.337 1.00 32.25 C
ATOM 16 O2 U A 29 -11.490 -15.110 2.471 1.00 31.62 O
ATOM 17 N3 U A 29 -9.394 -14.258 2.336 1.00 30.27 N
ATOM 18 C4 U A 29 -8.018 -14.341 2.194 1.00 32.54 C
ATOM 19 O4 U A 29 -7.332 -13.321 2.202 1.00 32.58 O
ATOM 20 C5 U A 29 -7.508 -15.678 2.033 1.00 31.76 C
ATOM 21 C6 U A 29 -8.361 -16.706 2.038 1.00 32.16 C
ATOM 22 P G A 30 -9.671 -19.992 -2.071 1.00 36.60 P
ATOM 23 OP1 G A 30 -10.205 -21.114 -2.870 1.00 37.00 O
ATOM 24 OP2 G A 30 -8.210 -19.785 -1.958 1.00 35.33 O
ATOM 25 O5' G A 30 -10.309 -18.629 -2.606 1.00 35.57 O
TER
ATOM 1 O3' U B 29 -10.293 -20.130 -0.602 1.00 34.71 O
ATOM 2 P G B 30 -9.671 -19.992 -2.071 1.00 36.60 P
ATOM 3 OP1 G B 30 -10.205 -21.114 -2.870 1.00 37.00 O
ATOM 4 OP2 G B 30 -8.210 -19.785 -1.958 1.00 35.33 O
ATOM 5 O5' G B 30 -10.309 -18.629 -2.606 1.00 35.57 O
ATOM 6 C5' G B 30 -11.707 -18.556 -2.847 1.00 33.56 C
ATOM 7 C4' G B 30 -12.115 -17.110 -3.029 1.00 32.08 C
ATOM 8 O4' G B 30 -11.792 -16.372 -1.820 1.00 32.50 O
ATOM 9 C3' G B 30 -11.360 -16.371 -4.125 1.00 32.44 C
ATOM 10 O3' G B 30 -11.931 -16.646 -5.402 1.00 33.61 O
ATOM 11 C2' G B 30 -11.587 -14.933 -3.684 1.00 31.51 C
ATOM 12 O2' G B 30 -12.829 -14.422 -4.117 1.00 30.72 O
ATOM 13 C1' G B 30 -11.485 -15.032 -2.156 1.00 31.60 C
ATOM 14 N9 G B 30 -10.108 -14.708 -1.791 1.00 31.58 N
ATOM 15 C8 G B 30 -9.012 -15.533 -1.858 1.00 31.25 C
ATOM 16 N7 G B 30 -7.894 -14.936 -1.553 1.00 31.49 N
ATOM 17 C5 G B 30 -8.264 -13.624 -1.297 1.00 30.90 C
ATOM 18 C6 G B 30 -7.485 -12.504 -0.919 1.00 30.90 C
ATOM 19 O6 G B 30 -6.263 -12.451 -0.739 1.00 31.69 O
ATOM 20 N1 G B 30 -8.262 -11.355 -0.746 1.00 29.57 N
ATOM 21 C2 G B 30 -9.622 -11.297 -0.930 1.00 30.21 C
ATOM 22 N2 G B 30 -10.212 -10.105 -0.725 1.00 30.29 N
ATOM 23 N3 G B 30 -10.360 -12.341 -1.290 1.00 30.63 N
ATOM 24 C4 G B 30 -9.623 -13.467 -1.445 1.00 30.79 C
ATOM 25 P A B 31 -11.027 -16.801 -6.718 1.00 34.39 P
ATOM 26 OP1 A B 31 -11.861 -17.413 -7.775 1.00 34.84 O
ATOM 27 OP2 A B 31 -9.738 -17.416 -6.347 1.00 33.39 O
ATOM 28 O5' A B 31 -10.744 -15.275 -7.099 1.00 33.73 O
TER
ATOM 2 P U A 29 -5.977 -20.490 2.178 1.00 35.02 P
ATOM 3 OP1 U A 29 -5.821 -21.884 1.700 1.00 34.96 O
ATOM 4 OP2 U A 29 -5.009 -19.448 1.767 1.00 33.16 O
ATOM 5 O5' U A 29 -7.432 -19.959 1.790 1.00 34.24 O
ATOM 6 C5' U A 29 -8.583 -20.778 1.974 1.00 35.59 C
ATOM 7 C4' U A 29 -9.842 -19.955 1.771 1.00 34.84 C
ATOM 8 O4' U A 29 -9.892 -18.869 2.732 1.00 36.10 O
ATOM 9 C3' U A 29 -9.918 -19.231 0.437 1.00 35.33 C
ATOM 10 O3' U A 29 -10.293 -20.130 -0.602 1.00 34.71 O
ATOM 11 C2' U A 29 -10.987 -18.185 0.749 1.00 34.74 C
ATOM 12 O2' U A 29 -12.302 -18.703 0.744 1.00 34.03 O
ATOM 13 C1' U A 29 -10.597 -17.771 2.167 1.00 34.11 C
ATOM 14 N1 U A 29 -9.726 -16.553 2.187 1.00 33.28 N
ATOM 15 C2 U A 29 -10.292 -15.299 2.337 1.00 32.25 C
ATOM 16 O2 U A 29 -11.490 -15.110 2.471 1.00 31.62 O
ATOM 17 N3 U A 29 -9.394 -14.258 2.336 1.00 30.27 N
ATOM 18 C4 U A 29 -8.018 -14.341 2.194 1.00 32.54 C
ATOM 19 O4 U A 29 -7.332 -13.321 2.202 1.00 32.58 O
ATOM 20 C5 U A 29 -7.508 -15.678 2.033 1.00 31.76 C
ATOM 21 C6 U A 29 -8.361 -16.706 2.038 1.00 32.16 C
ATOM 22 P G A 30 -9.671 -19.992 -2.071 1.00 36.60 P
ATOM 23 OP1 G A 30 -10.205 -21.114 -2.870 1.00 37.00 O
ATOM 24 OP2 G A 30 -8.210 -19.785 -1.958 1.00 35.33 O
ATOM 25 O5' G A 30 -10.309 -18.629 -2.606 1.00 35.57 O
TER
ATOM 1 O3' U B 29 -10.293 -20.130 -0.602 1.00 34.71 O
ATOM 2 P G B 30 -9.671 -19.992 -2.071 1.00 36.60 P
ATOM 3 OP1 G B 30 -10.205 -21.114 -2.870 1.00 37.00 O
ATOM 4 OP2 G B 30 -8.210 -19.785 -1.958 1.00 35.33 O
ATOM 5 O5' G B 30 -10.309 -18.629 -2.606 1.00 35.57 O
ATOM 6 C5' G B 30 -11.707 -18.556 -2.847 1.00 33.56 C
ATOM 7 C4' G B 30 -12.115 -17.110 -3.029 1.00 32.08 C
ATOM 8 O4' G B 30 -11.792 -16.372 -1.820 1.00 32.50 O
ATOM 9 C3' G B 30 -11.360 -16.371 -4.125 1.00 32.44 C
ATOM 10 O3' G B 30 -11.931 -16.646 -5.402 1.00 33.61 O
ATOM 11 C2' G B 30 -11.587 -14.933 -3.684 1.00 31.51 C
ATOM 12 O2' G B 30 -12.829 -14.422 -4.117 1.00 30.72 O
ATOM 13 C1' G B 30 -11.485 -15.032 -2.156 1.00 31.60 C
ATOM 14 N9 G B 30 -10.108 -14.708 -1.791 1.00 31.58 N
ATOM 15 C8 G B 30 -9.012 -15.533 -1.858 1.00 31.25 C
ATOM 16 N7 G B 30 -7.894 -14.936 -1.553 1.00 31.49 N
ATOM 17 C5 G B 30 -8.264 -13.624 -1.297 1.00 30.90 C
ATOM 18 C6 G B 30 -7.485 -12.504 -0.919 1.00 30.90 C
ATOM 19 O6 G B 30 -6.263 -12.451 -0.739 1.00 31.69 O
ATOM 20 N1 G B 30 -8.262 -11.355 -0.746 1.00 29.57 N
ATOM 21 C2 G B 30 -9.622 -11.297 -0.930 1.00 30.21 C
ATOM 22 N2 G B 30 -10.212 -10.105 -0.725 1.00 30.29 N
ATOM 23 N3 G B 30 -10.360 -12.341 -1.290 1.00 30.63 N
ATOM 24 C4 G B 30 -9.623 -13.467 -1.445 1.00 30.79 C
ATOM 25 P A B 31 -11.027 -16.801 -6.718 1.00 34.39 P
ATOM 26 OP1 A B 31 -11.861 -17.413 -7.775 1.00 34.84 O
ATOM 27 OP2 A B 31 -9.738 -17.416 -6.347 1.00 33.39 O
ATOM 28 O5' A B 31 -10.744 -15.275 -7.099 1.00 33.73 O
TER
Atoms:
C4: (-8.018,-14.341,2.194)
N3: (-9.394,-14.258,2.336)
OP1: (-5.821,-21.884,1.700)
OP2: (-5.009,-19.448,1.767)
C2: (-10.292,-15.299,2.337)
C1': (-10.597,-17.771,2.167)
C3': (-9.918,-19.231,0.437)
O5': (-7.432,-19.959,1.790)
O4': (-9.892,-18.869,2.732)
C5': (-8.583,-20.778,1.974)
P: (-5.977,-20.490,2.178)
C4': (-9.842,-19.955,1.771)
C2': (-10.987,-18.185,0.749)
O2': (-12.302,-18.703,0.744)
N1: (-9.726,-16.553,2.187)
O4: (-7.332,-13.321,2.202)
O2: (-11.490,-15.110,2.471)
C6: (-8.361,-16.706,2.038)
C5: (-7.508,-15.678,2.033)
O3': (-10.293,-20.130,-0.602)
N3: (-9.394,-14.258,2.336)
OP1: (-5.821,-21.884,1.700)
OP2: (-5.009,-19.448,1.767)
C2: (-10.292,-15.299,2.337)
C1': (-10.597,-17.771,2.167)
C3': (-9.918,-19.231,0.437)
O5': (-7.432,-19.959,1.790)
O4': (-9.892,-18.869,2.732)
C5': (-8.583,-20.778,1.974)
P: (-5.977,-20.490,2.178)
C4': (-9.842,-19.955,1.771)
C2': (-10.987,-18.185,0.749)
O2': (-12.302,-18.703,0.744)
N1: (-9.726,-16.553,2.187)
O4: (-7.332,-13.321,2.202)
O2: (-11.490,-15.110,2.471)
C6: (-8.361,-16.706,2.038)
C5: (-7.508,-15.678,2.033)
O3': (-10.293,-20.130,-0.602)
OP1: (-10.205,-21.114,-2.870)
OP2: (-8.210,-19.785,-1.958)
C3': (-11.360,-16.371,-4.125)
C1': (-11.485,-15.032,-2.156)
C5': (-11.707,-18.556,-2.847)
O6: (-6.263,-12.451,-0.739)
O4': (-11.792,-16.372,-1.820)
C8: (-9.012,-15.533,-1.858)
C2: (-9.622,-11.297,-0.930)
C6: (-7.485,-12.504,-0.919)
C5: (-8.264,-13.624,-1.297)
C4: (-9.623,-13.467,-1.445)
P: (-9.671,-19.992,-2.071)
C4': (-12.115,-17.110,-3.029)
C2': (-11.587,-14.933,-3.684)
O2': (-12.829,-14.422,-4.117)
N1: (-8.262,-11.355,-0.746)
N2: (-10.212,-10.105,-0.725)
N3: (-10.360,-12.341,-1.290)
N7: (-7.894,-14.936,-1.553)
N9: (-10.108,-14.708,-1.791)
O5': (-10.309,-18.629,-2.606)
O3': (-11.931,-16.646,-5.402)
OP2: (-8.210,-19.785,-1.958)
C3': (-11.360,-16.371,-4.125)
C1': (-11.485,-15.032,-2.156)
C5': (-11.707,-18.556,-2.847)
O6: (-6.263,-12.451,-0.739)
O4': (-11.792,-16.372,-1.820)
C8: (-9.012,-15.533,-1.858)
C2: (-9.622,-11.297,-0.930)
C6: (-7.485,-12.504,-0.919)
C5: (-8.264,-13.624,-1.297)
C4: (-9.623,-13.467,-1.445)
P: (-9.671,-19.992,-2.071)
C4': (-12.115,-17.110,-3.029)
C2': (-11.587,-14.933,-3.684)
O2': (-12.829,-14.422,-4.117)
N1: (-8.262,-11.355,-0.746)
N2: (-10.212,-10.105,-0.725)
N3: (-10.360,-12.341,-1.290)
N7: (-7.894,-14.936,-1.553)
N9: (-10.108,-14.708,-1.791)
O5': (-10.309,-18.629,-2.606)
O3': (-11.931,-16.646,-5.402)
Image (generated by PyMOL):