Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0555:0556
Extra
PDB:
ATOM 1 O3' A A 554 3.694 89.362 102.298 1.00 50.56 O
ATOM 2 P U A 555 3.069 88.813 103.678 1.00 50.12 P
ATOM 3 OP1 U A 555 3.963 87.740 104.156 1.00 44.63 O
ATOM 4 OP2 U A 555 1.630 88.524 103.450 1.00 49.38 O
ATOM 5 O5' U A 555 3.158 90.060 104.663 1.00 47.48 O
ATOM 6 C5' U A 555 4.395 90.775 104.850 1.00 45.69 C
ATOM 7 C4' U A 555 4.119 92.134 105.427 1.00 43.79 C
ATOM 8 O4' U A 555 3.258 92.850 104.511 1.00 46.27 O
ATOM 9 C3' U A 555 3.365 92.135 106.741 1.00 44.75 C
ATOM 10 O3' U A 555 4.265 91.985 107.838 1.00 48.91 O
ATOM 11 C2' U A 555 2.667 93.490 106.721 1.00 44.04 C
ATOM 12 O2' U A 555 3.483 94.568 107.116 1.00 40.74 O
ATOM 13 C1' U A 555 2.332 93.635 105.236 1.00 46.15 C
ATOM 14 N1 U A 555 0.975 93.194 104.871 1.00 49.90 N
ATOM 15 C2 U A 555 -0.068 94.090 105.057 1.00 49.87 C
ATOM 16 O2 U A 555 0.089 95.213 105.527 1.00 50.74 O
ATOM 17 N3 U A 555 -1.301 93.623 104.675 1.00 49.57 N
ATOM 18 C4 U A 555 -1.594 92.385 104.144 1.00 50.56 C
ATOM 19 O4 U A 555 -2.759 92.119 103.842 1.00 53.77 O
ATOM 20 C5 U A 555 -0.468 91.511 103.994 1.00 49.88 C
ATOM 21 C6 U A 555 0.744 91.932 104.351 1.00 49.22 C
ATOM 22 P G A 556 3.734 91.417 109.252 1.00 48.63 P
ATOM 23 OP1 G A 556 4.728 91.816 110.282 1.00 50.02 O
ATOM 24 OP2 G A 556 3.394 89.987 109.085 1.00 46.03 O
ATOM 25 O5' G A 556 2.405 92.249 109.522 1.00 46.34 O
TER
ATOM 1 O3' U B 555 4.265 91.985 107.838 1.00 48.91 O
ATOM 2 P G B 556 3.734 91.417 109.252 1.00 48.63 P
ATOM 3 OP1 G B 556 4.728 91.816 110.282 1.00 50.02 O
ATOM 4 OP2 G B 556 3.394 89.987 109.085 1.00 46.03 O
ATOM 5 O5' G B 556 2.405 92.249 109.522 1.00 46.34 O
ATOM 6 C5' G B 556 2.458 93.575 110.069 1.00 48.46 C
ATOM 7 C4' G B 556 1.058 94.092 110.291 1.00 52.55 C
ATOM 8 O4' G B 556 0.376 94.213 109.007 1.00 52.74 O
ATOM 9 C3' G B 556 0.148 93.166 111.085 1.00 53.73 C
ATOM 10 O3' G B 556 0.359 93.236 112.490 1.00 56.19 O
ATOM 11 C2' G B 556 -1.233 93.634 110.654 1.00 52.36 C
ATOM 12 O2' G B 556 -1.597 94.848 111.283 1.00 49.38 O
ATOM 13 C1' G B 556 -1.000 93.875 109.160 1.00 51.28 C
ATOM 14 N9 G B 556 -1.271 92.690 108.350 1.00 48.06 N
ATOM 15 C8 G B 556 -0.370 91.725 107.973 1.00 48.49 C
ATOM 16 N7 G B 556 -0.905 90.775 107.253 1.00 48.66 N
ATOM 17 C5 G B 556 -2.241 91.133 107.150 1.00 47.15 C
ATOM 18 C6 G B 556 -3.311 90.487 106.487 1.00 47.30 C
ATOM 19 O6 G B 556 -3.288 89.431 105.848 1.00 46.79 O
ATOM 20 N1 G B 556 -4.502 91.193 106.622 1.00 44.45 N
ATOM 21 C2 G B 556 -4.644 92.369 107.311 1.00 47.62 C
ATOM 22 N2 G B 556 -5.875 92.899 107.333 1.00 47.78 N
ATOM 23 N3 G B 556 -3.651 92.984 107.937 1.00 49.67 N
ATOM 24 C4 G B 556 -2.485 92.314 107.816 1.00 48.48 C
ATOM 25 P A B 557 -0.108 92.008 113.420 1.00 59.53 P
ATOM 26 OP1 A B 557 0.486 92.236 114.765 1.00 59.61 O
ATOM 27 OP2 A B 557 0.135 90.716 112.721 1.00 54.56 O
ATOM 28 O5' A B 557 -1.681 92.223 113.513 1.00 59.99 O
TER
ATOM 2 P U A 555 3.069 88.813 103.678 1.00 50.12 P
ATOM 3 OP1 U A 555 3.963 87.740 104.156 1.00 44.63 O
ATOM 4 OP2 U A 555 1.630 88.524 103.450 1.00 49.38 O
ATOM 5 O5' U A 555 3.158 90.060 104.663 1.00 47.48 O
ATOM 6 C5' U A 555 4.395 90.775 104.850 1.00 45.69 C
ATOM 7 C4' U A 555 4.119 92.134 105.427 1.00 43.79 C
ATOM 8 O4' U A 555 3.258 92.850 104.511 1.00 46.27 O
ATOM 9 C3' U A 555 3.365 92.135 106.741 1.00 44.75 C
ATOM 10 O3' U A 555 4.265 91.985 107.838 1.00 48.91 O
ATOM 11 C2' U A 555 2.667 93.490 106.721 1.00 44.04 C
ATOM 12 O2' U A 555 3.483 94.568 107.116 1.00 40.74 O
ATOM 13 C1' U A 555 2.332 93.635 105.236 1.00 46.15 C
ATOM 14 N1 U A 555 0.975 93.194 104.871 1.00 49.90 N
ATOM 15 C2 U A 555 -0.068 94.090 105.057 1.00 49.87 C
ATOM 16 O2 U A 555 0.089 95.213 105.527 1.00 50.74 O
ATOM 17 N3 U A 555 -1.301 93.623 104.675 1.00 49.57 N
ATOM 18 C4 U A 555 -1.594 92.385 104.144 1.00 50.56 C
ATOM 19 O4 U A 555 -2.759 92.119 103.842 1.00 53.77 O
ATOM 20 C5 U A 555 -0.468 91.511 103.994 1.00 49.88 C
ATOM 21 C6 U A 555 0.744 91.932 104.351 1.00 49.22 C
ATOM 22 P G A 556 3.734 91.417 109.252 1.00 48.63 P
ATOM 23 OP1 G A 556 4.728 91.816 110.282 1.00 50.02 O
ATOM 24 OP2 G A 556 3.394 89.987 109.085 1.00 46.03 O
ATOM 25 O5' G A 556 2.405 92.249 109.522 1.00 46.34 O
TER
ATOM 1 O3' U B 555 4.265 91.985 107.838 1.00 48.91 O
ATOM 2 P G B 556 3.734 91.417 109.252 1.00 48.63 P
ATOM 3 OP1 G B 556 4.728 91.816 110.282 1.00 50.02 O
ATOM 4 OP2 G B 556 3.394 89.987 109.085 1.00 46.03 O
ATOM 5 O5' G B 556 2.405 92.249 109.522 1.00 46.34 O
ATOM 6 C5' G B 556 2.458 93.575 110.069 1.00 48.46 C
ATOM 7 C4' G B 556 1.058 94.092 110.291 1.00 52.55 C
ATOM 8 O4' G B 556 0.376 94.213 109.007 1.00 52.74 O
ATOM 9 C3' G B 556 0.148 93.166 111.085 1.00 53.73 C
ATOM 10 O3' G B 556 0.359 93.236 112.490 1.00 56.19 O
ATOM 11 C2' G B 556 -1.233 93.634 110.654 1.00 52.36 C
ATOM 12 O2' G B 556 -1.597 94.848 111.283 1.00 49.38 O
ATOM 13 C1' G B 556 -1.000 93.875 109.160 1.00 51.28 C
ATOM 14 N9 G B 556 -1.271 92.690 108.350 1.00 48.06 N
ATOM 15 C8 G B 556 -0.370 91.725 107.973 1.00 48.49 C
ATOM 16 N7 G B 556 -0.905 90.775 107.253 1.00 48.66 N
ATOM 17 C5 G B 556 -2.241 91.133 107.150 1.00 47.15 C
ATOM 18 C6 G B 556 -3.311 90.487 106.487 1.00 47.30 C
ATOM 19 O6 G B 556 -3.288 89.431 105.848 1.00 46.79 O
ATOM 20 N1 G B 556 -4.502 91.193 106.622 1.00 44.45 N
ATOM 21 C2 G B 556 -4.644 92.369 107.311 1.00 47.62 C
ATOM 22 N2 G B 556 -5.875 92.899 107.333 1.00 47.78 N
ATOM 23 N3 G B 556 -3.651 92.984 107.937 1.00 49.67 N
ATOM 24 C4 G B 556 -2.485 92.314 107.816 1.00 48.48 C
ATOM 25 P A B 557 -0.108 92.008 113.420 1.00 59.53 P
ATOM 26 OP1 A B 557 0.486 92.236 114.765 1.00 59.61 O
ATOM 27 OP2 A B 557 0.135 90.716 112.721 1.00 54.56 O
ATOM 28 O5' A B 557 -1.681 92.223 113.513 1.00 59.99 O
TER
Atoms:
C4: (-1.594,92.385,104.144)
N3: (-1.301,93.623,104.675)
OP1: (3.963,87.740,104.156)
OP2: (1.630,88.524,103.450)
C2: (-0.068,94.090,105.057)
C1': (2.332,93.635,105.236)
C3': (3.365,92.135,106.741)
O5': (3.158,90.060,104.663)
O4': (3.258,92.850,104.511)
C5': (4.395,90.775,104.850)
P: (3.069,88.813,103.678)
C4': (4.119,92.134,105.427)
C2': (2.667,93.490,106.721)
O2': (3.483,94.568,107.116)
N1: (0.975,93.194,104.871)
O4: (-2.759,92.119,103.842)
O2: (0.089,95.213,105.527)
C6: (0.744,91.932,104.351)
C5: (-0.468,91.511,103.994)
O3': (4.265,91.985,107.838)
N3: (-1.301,93.623,104.675)
OP1: (3.963,87.740,104.156)
OP2: (1.630,88.524,103.450)
C2: (-0.068,94.090,105.057)
C1': (2.332,93.635,105.236)
C3': (3.365,92.135,106.741)
O5': (3.158,90.060,104.663)
O4': (3.258,92.850,104.511)
C5': (4.395,90.775,104.850)
P: (3.069,88.813,103.678)
C4': (4.119,92.134,105.427)
C2': (2.667,93.490,106.721)
O2': (3.483,94.568,107.116)
N1: (0.975,93.194,104.871)
O4: (-2.759,92.119,103.842)
O2: (0.089,95.213,105.527)
C6: (0.744,91.932,104.351)
C5: (-0.468,91.511,103.994)
O3': (4.265,91.985,107.838)
OP1: (4.728,91.816,110.282)
OP2: (3.394,89.987,109.085)
C3': (0.148,93.166,111.085)
C1': (-1.000,93.875,109.160)
C5': (2.458,93.575,110.069)
O6: (-3.288,89.431,105.848)
O4': (0.376,94.213,109.007)
C8: (-0.370,91.725,107.973)
C2: (-4.644,92.369,107.311)
C6: (-3.311,90.487,106.487)
C5: (-2.241,91.133,107.150)
C4: (-2.485,92.314,107.816)
P: (3.734,91.417,109.252)
C4': (1.058,94.092,110.291)
C2': (-1.233,93.634,110.654)
O2': (-1.597,94.848,111.283)
N1: (-4.502,91.193,106.622)
N2: (-5.875,92.899,107.333)
N3: (-3.651,92.984,107.937)
N7: (-0.905,90.775,107.253)
N9: (-1.271,92.690,108.350)
O5': (2.405,92.249,109.522)
O3': (0.359,93.236,112.490)
OP2: (3.394,89.987,109.085)
C3': (0.148,93.166,111.085)
C1': (-1.000,93.875,109.160)
C5': (2.458,93.575,110.069)
O6: (-3.288,89.431,105.848)
O4': (0.376,94.213,109.007)
C8: (-0.370,91.725,107.973)
C2: (-4.644,92.369,107.311)
C6: (-3.311,90.487,106.487)
C5: (-2.241,91.133,107.150)
C4: (-2.485,92.314,107.816)
P: (3.734,91.417,109.252)
C4': (1.058,94.092,110.291)
C2': (-1.233,93.634,110.654)
O2': (-1.597,94.848,111.283)
N1: (-4.502,91.193,106.622)
N2: (-5.875,92.899,107.333)
N3: (-3.651,92.984,107.937)
N7: (-0.905,90.775,107.253)
N9: (-1.271,92.690,108.350)
O5': (2.405,92.249,109.522)
O3': (0.359,93.236,112.490)
Image (generated by PyMOL):