ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A984:A985

Extra

PDB:
ATOM 1 O3' C A 983 -99.636 88.968 86.253 1.00 48.57 O
ATOM 2 P U A 984 -100.461 87.743 86.896 1.00 59.33 P
ATOM 3 OP1 U A 984 -99.905 87.498 88.246 1.00 59.33 O
ATOM 4 OP2 U A 984 -100.441 86.637 85.914 1.00 59.33 O
ATOM 5 O5' U A 984 -101.928 88.336 87.020 1.00 59.33 O
ATOM 6 C5' U A 984 -102.258 89.245 88.057 1.00 59.33 C
ATOM 7 C4' U A 984 -103.748 89.334 88.245 1.00 59.33 C
ATOM 8 O4' U A 984 -104.335 90.029 87.112 1.00 59.33 O
ATOM 9 C3' U A 984 -104.486 88.001 88.289 1.00 59.33 C
ATOM 10 O3' U A 984 -104.468 87.394 89.560 1.00 59.33 O
ATOM 11 C2' U A 984 -105.875 88.368 87.809 1.00 59.33 C
ATOM 12 O2' U A 984 -106.620 89.006 88.846 1.00 59.33 O
ATOM 13 C1' U A 984 -105.540 89.395 86.727 1.00 59.33 C
ATOM 14 N1 U A 984 -105.333 88.757 85.377 1.00 59.01 N
ATOM 15 C2 U A 984 -106.243 89.009 84.343 1.00 59.01 C
ATOM 16 O2 U A 984 -107.222 89.728 84.476 1.00 59.01 O
ATOM 17 N3 U A 984 -105.967 88.384 83.140 1.00 59.01 N
ATOM 18 C4 U A 984 -104.894 87.554 82.866 1.00 59.01 C
ATOM 19 O4 U A 984 -104.771 87.067 81.749 1.00 59.01 O
ATOM 20 C5 U A 984 -103.997 87.337 83.959 1.00 59.01 C
ATOM 21 C6 U A 984 -104.242 87.933 85.138 1.00 59.01 C
ATOM 22 P G A 985 -104.386 85.799 89.670 1.00 70.44 P
ATOM 23 OP1 G A 985 -104.914 85.430 91.002 1.00 70.44 O
ATOM 24 OP2 G A 985 -103.003 85.407 89.315 1.00 70.44 O
ATOM 25 O5' G A 985 -105.386 85.318 88.531 1.00 70.44 O
TER

ATOM 1 O3' U B 984 -104.468 87.394 89.560 1.00 59.33 O
ATOM 2 P G B 985 -104.386 85.799 89.670 1.00 70.44 P
ATOM 3 OP1 G B 985 -104.914 85.430 91.002 1.00 70.44 O
ATOM 4 OP2 G B 985 -103.003 85.407 89.315 1.00 70.44 O
ATOM 5 O5' G B 985 -105.386 85.318 88.531 1.00 70.44 O
ATOM 6 C5' G B 985 -106.427 84.397 88.809 1.00 70.44 C
ATOM 7 C4' G B 985 -107.787 85.000 88.539 1.00 70.44 C
ATOM 8 O4' G B 985 -107.667 86.100 87.582 1.00 70.44 O
ATOM 9 C3' G B 985 -108.801 84.067 87.894 1.00 70.44 C
ATOM 10 O3' G B 985 -109.445 83.207 88.818 1.00 70.44 O
ATOM 11 C2' G B 985 -109.728 85.045 87.190 1.00 70.44 C
ATOM 12 O2' G B 985 -110.533 85.747 88.133 1.00 70.44 O
ATOM 13 C1' G B 985 -108.703 86.015 86.622 1.00 70.44 C
ATOM 14 N9 G B 985 -108.106 85.526 85.346 1.00 69.36 N
ATOM 15 C8 G B 985 -106.747 85.350 85.187 1.00 69.36 C
ATOM 16 N7 G B 985 -106.384 84.930 84.007 1.00 69.36 N
ATOM 17 C5 G B 985 -107.569 84.810 83.298 1.00 69.36 C
ATOM 18 C6 G B 985 -107.776 84.391 81.948 1.00 69.36 C
ATOM 19 O6 G B 985 -106.956 84.035 81.095 1.00 69.36 O
ATOM 20 N1 G B 985 -109.111 84.405 81.606 1.00 69.36 N
ATOM 21 C2 G B 985 -110.112 84.779 82.456 1.00 69.36 C
ATOM 22 N2 G B 985 -111.332 84.724 81.926 1.00 69.36 N
ATOM 23 N3 G B 985 -109.951 85.172 83.719 1.00 69.36 N
ATOM 24 C4 G B 985 -108.649 85.173 84.100 1.00 69.36 C
ATOM 25 P G B 986 -109.207 81.614 88.729 1.00 83.85 P
ATOM 26 OP1 G B 986 -109.425 81.061 90.087 1.00 83.85 O
ATOM 27 OP2 G B 986 -107.888 81.402 88.075 1.00 83.85 O
ATOM 28 O5' G B 986 -110.372 81.132 87.759 1.00 83.85 O
TER

Atoms:
C4: (-104.894,87.554,82.866)
N3: (-105.967,88.384,83.140)
OP1: (-99.905,87.498,88.246)
OP2: (-100.441,86.637,85.914)
C2: (-106.243,89.009,84.343)
C1': (-105.540,89.395,86.727)
C3': (-104.486,88.001,88.289)
O5': (-101.928,88.336,87.020)
O4': (-104.335,90.029,87.112)
C5': (-102.258,89.245,88.057)
P: (-100.461,87.743,86.896)
C4': (-103.748,89.334,88.245)
C2': (-105.875,88.368,87.809)
O2': (-106.620,89.006,88.846)
N1: (-105.333,88.757,85.377)
O4: (-104.771,87.067,81.749)
O2: (-107.222,89.728,84.476)
C6: (-104.242,87.933,85.138)
C5: (-103.997,87.337,83.959)
O3': (-104.468,87.394,89.560)
OP1: (-104.914,85.430,91.002)
OP2: (-103.003,85.407,89.315)
C3': (-108.801,84.067,87.894)
C1': (-108.703,86.015,86.622)
C5': (-106.427,84.397,88.809)
O6: (-106.956,84.035,81.095)
O4': (-107.667,86.100,87.582)
C8: (-106.747,85.350,85.187)
C2: (-110.112,84.779,82.456)
C6: (-107.776,84.391,81.948)
C5: (-107.569,84.810,83.298)
C4: (-108.649,85.173,84.100)
P: (-104.386,85.799,89.670)
C4': (-107.787,85.000,88.539)
C2': (-109.728,85.045,87.190)
O2': (-110.533,85.747,88.133)
N1: (-109.111,84.405,81.606)
N2: (-111.332,84.724,81.926)
N3: (-109.951,85.172,83.719)
N7: (-106.384,84.930,84.007)
N9: (-108.106,85.526,85.346)
O5': (-105.386,85.318,88.531)
O3': (-109.445,83.207,88.818)
Image (generated by PyMOL):
PyMOL image
show in jmol