ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02009:0523

Extra

PDB:
ATOM 1 O3' A A2008 34.465 132.408 103.916 1.00 35.42 O
ATOM 2 P U A2009 34.562 133.915 104.459 1.00 31.81 P
ATOM 3 OP1 U A2009 33.219 134.258 104.946 1.00 33.45 O
ATOM 4 OP2 U A2009 35.205 134.779 103.443 1.00 36.90 O
ATOM 5 O5' U A2009 35.514 133.752 105.727 1.00 34.58 O
ATOM 6 C5' U A2009 36.573 134.681 106.018 1.00 33.95 C
ATOM 7 C4' U A2009 36.886 134.656 107.503 1.00 33.11 C
ATOM 8 O4' U A2009 35.740 135.178 108.226 1.00 34.12 O
ATOM 9 C3' U A2009 37.088 133.272 108.105 1.00 31.46 C
ATOM 10 O3' U A2009 38.387 132.746 107.910 1.00 30.54 O
ATOM 11 C2' U A2009 36.752 133.496 109.574 1.00 32.33 C
ATOM 12 O2' U A2009 37.769 134.112 110.321 1.00 30.55 O
ATOM 13 C1' U A2009 35.594 134.484 109.461 1.00 33.87 C
ATOM 14 N1 U A2009 34.282 133.816 109.495 1.00 35.74 N
ATOM 15 C2 U A2009 33.740 133.550 110.742 1.00 34.49 C
ATOM 16 O2 U A2009 34.291 133.837 111.776 1.00 37.68 O
ATOM 17 N3 U A2009 32.520 132.933 110.729 1.00 37.21 N
ATOM 18 C4 U A2009 31.787 132.562 109.626 1.00 37.85 C
ATOM 19 O4 U A2009 30.688 132.023 109.790 1.00 39.53 O
ATOM 20 C5 U A2009 32.413 132.858 108.362 1.00 35.63 C
ATOM 21 C6 U A2009 33.608 133.461 108.341 1.00 32.53 C
ATOM 22 P U A2010 38.563 131.395 107.070 1.00 34.17 P
ATOM 23 OP1 U A2010 38.869 131.826 105.689 1.00 35.46 O
ATOM 24 OP2 U A2010 37.391 130.522 107.325 1.00 33.46 O
ATOM 25 O5' U A2010 39.789 130.606 107.725 1.00 34.17 O
TER

ATOM 1 O3' C B 522 25.180 130.674 109.769 1.00 51.43 O
ATOM 2 P G B 523 25.418 129.083 109.854 1.00 55.11 P
ATOM 3 OP1 G B 523 24.368 128.468 108.999 1.00 55.73 O
ATOM 4 OP2 G B 523 25.564 128.636 111.269 1.00 55.70 O
ATOM 5 O5' G B 523 26.820 128.872 109.131 1.00 51.84 O
ATOM 6 C5' G B 523 27.033 129.377 107.803 1.00 47.67 C
ATOM 7 C4' G B 523 28.275 128.770 107.199 1.00 45.34 C
ATOM 8 O4' G B 523 29.466 129.343 107.809 1.00 45.47 O
ATOM 9 C3' G B 523 28.430 127.258 107.345 1.00 44.30 C
ATOM 10 O3' G B 523 29.053 126.806 106.156 1.00 46.03 O
ATOM 11 C2' G B 523 29.450 127.143 108.474 1.00 41.55 C
ATOM 12 O2' G B 523 30.184 125.943 108.444 1.00 43.79 O
ATOM 13 C1' G B 523 30.362 128.299 108.105 1.00 42.04 C
ATOM 14 N9 G B 523 31.357 128.771 109.063 1.00 41.51 N
ATOM 15 C8 G B 523 31.272 128.857 110.436 1.00 40.86 C
ATOM 16 N7 G B 523 32.344 129.370 110.981 1.00 38.21 N
ATOM 17 C5 G B 523 33.181 129.634 109.904 1.00 39.47 C
ATOM 18 C6 G B 523 34.473 130.209 109.859 1.00 38.14 C
ATOM 19 O6 G B 523 35.169 130.619 110.791 1.00 38.78 O
ATOM 20 N1 G B 523 34.950 130.288 108.555 1.00 39.13 N
ATOM 21 C2 G B 523 34.276 129.868 107.436 1.00 39.99 C
ATOM 22 N2 G B 523 34.904 130.019 106.259 1.00 39.15 N
ATOM 23 N3 G B 523 33.076 129.336 107.466 1.00 39.61 N
ATOM 24 C4 G B 523 32.590 129.253 108.720 1.00 39.87 C
ATOM 25 P A B 524 28.328 125.720 105.235 1.00 43.47 P
ATOM 26 OP1 A B 524 27.075 126.333 104.749 1.00 44.13 O
ATOM 27 OP2 A B 524 28.278 124.439 105.975 1.00 44.62 O
ATOM 28 O5' A B 524 29.332 125.577 104.010 1.00 43.42 O
TER

Atoms:
C4: (31.787,132.562,109.626)
N3: (32.520,132.933,110.729)
OP1: (33.219,134.258,104.946)
OP2: (35.205,134.779,103.443)
C2: (33.740,133.550,110.742)
C1': (35.594,134.484,109.461)
C3': (37.088,133.272,108.105)
O5': (35.514,133.752,105.727)
O4': (35.740,135.178,108.226)
C5': (36.573,134.681,106.018)
P: (34.562,133.915,104.459)
C4': (36.886,134.656,107.503)
C2': (36.752,133.496,109.574)
O2': (37.769,134.112,110.321)
N1: (34.282,133.816,109.495)
O4: (30.688,132.023,109.790)
O2: (34.291,133.837,111.776)
C6: (33.608,133.461,108.341)
C5: (32.413,132.858,108.362)
O3': (38.387,132.746,107.910)
OP1: (24.368,128.468,108.999)
OP2: (25.564,128.636,111.269)
C3': (28.430,127.258,107.345)
C1': (30.362,128.299,108.105)
C5': (27.033,129.377,107.803)
O6: (35.169,130.619,110.791)
O4': (29.466,129.343,107.809)
C8: (31.272,128.857,110.436)
C2: (34.276,129.868,107.436)
C6: (34.473,130.209,109.859)
C5: (33.181,129.634,109.904)
C4: (32.590,129.253,108.720)
P: (25.418,129.083,109.854)
C4': (28.275,128.770,107.199)
C2': (29.450,127.143,108.474)
O2': (30.184,125.943,108.444)
N1: (34.950,130.288,108.555)
N2: (34.904,130.019,106.259)
N3: (33.076,129.336,107.466)
N7: (32.344,129.370,110.981)
N9: (31.357,128.771,109.063)
O5': (26.820,128.872,109.131)
O3': (29.053,126.806,106.156)
Image (generated by PyMOL):
PyMOL image
show in jmol