ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:02009:0523

Extra

PDB:
ATOM 1 O3' A A2008 33.777 132.764 103.875 1.00 41.00 O
ATOM 2 P U A2009 33.918 134.244 104.481 1.00 41.27 P
ATOM 3 OP1 U A2009 32.617 134.618 105.091 1.00 42.66 O
ATOM 4 OP2 U A2009 34.530 135.140 103.466 1.00 42.36 O
ATOM 5 O5' U A2009 34.957 134.054 105.666 1.00 41.63 O
ATOM 6 C5' U A2009 35.930 135.060 105.969 1.00 40.33 C
ATOM 7 C4' U A2009 36.225 135.063 107.448 1.00 40.67 C
ATOM 8 O4' U A2009 35.053 135.537 108.162 1.00 40.07 O
ATOM 9 C3' U A2009 36.502 133.712 108.092 1.00 39.59 C
ATOM 10 O3' U A2009 37.824 133.235 107.857 1.00 40.09 O
ATOM 11 C2' U A2009 36.221 134.011 109.557 1.00 38.38 C
ATOM 12 O2' U A2009 37.257 134.749 110.175 1.00 36.95 O
ATOM 13 C1' U A2009 34.990 134.914 109.436 1.00 38.38 C
ATOM 14 N1 U A2009 33.719 134.179 109.538 1.00 36.81 N
ATOM 15 C2 U A2009 33.244 133.883 110.810 1.00 37.61 C
ATOM 16 O2 U A2009 33.829 134.197 111.833 1.00 38.94 O
ATOM 17 N3 U A2009 32.056 133.202 110.841 1.00 37.07 N
ATOM 18 C4 U A2009 31.311 132.788 109.765 1.00 37.90 C
ATOM 19 O4 U A2009 30.258 132.187 109.964 1.00 40.06 O
ATOM 20 C5 U A2009 31.867 133.116 108.485 1.00 37.04 C
ATOM 21 C6 U A2009 33.021 133.790 108.418 1.00 35.08 C
ATOM 22 P U A2010 38.034 131.891 107.006 1.00 40.03 P
ATOM 23 OP1 U A2010 38.563 132.324 105.704 1.00 42.98 O
ATOM 24 OP2 U A2010 36.783 131.107 107.061 1.00 44.37 O
ATOM 25 O5' U A2010 39.110 131.020 107.803 1.00 39.92 O
TER

ATOM 1 O3' C B 522 24.907 130.900 109.818 1.00 53.75 O
ATOM 2 P G B 523 25.146 129.319 110.022 1.00 56.59 P
ATOM 3 OP1 G B 523 24.014 128.607 109.377 1.00 59.11 O
ATOM 4 OP2 G B 523 25.481 129.016 111.436 1.00 58.31 O
ATOM 5 O5' G B 523 26.459 129.039 109.174 1.00 54.41 O
ATOM 6 C5' G B 523 26.578 129.516 107.832 1.00 49.91 C
ATOM 7 C4' G B 523 27.817 128.950 107.191 1.00 47.93 C
ATOM 8 O4' G B 523 28.997 129.534 107.808 1.00 46.90 O
ATOM 9 C3' G B 523 28.005 127.440 107.311 1.00 47.58 C
ATOM 10 O3' G B 523 28.633 127.015 106.112 1.00 50.86 O
ATOM 11 C2' G B 523 29.023 127.320 108.442 1.00 45.00 C
ATOM 12 O2' G B 523 29.788 126.138 108.377 1.00 47.28 O
ATOM 13 C1' G B 523 29.906 128.503 108.105 1.00 43.26 C
ATOM 14 N9 G B 523 30.881 128.988 109.071 1.00 41.44 N
ATOM 15 C8 G B 523 30.776 129.095 110.438 1.00 39.90 C
ATOM 16 N7 G B 523 31.828 129.647 110.986 1.00 38.27 N
ATOM 17 C5 G B 523 32.675 129.906 109.916 1.00 37.68 C
ATOM 18 C6 G B 523 33.947 130.524 109.875 1.00 37.01 C
ATOM 19 O6 G B 523 34.611 130.971 110.804 1.00 37.77 O
ATOM 20 N1 G B 523 34.440 130.597 108.576 1.00 36.72 N
ATOM 21 C2 G B 523 33.793 130.125 107.459 1.00 37.36 C
ATOM 22 N2 G B 523 34.423 130.275 106.290 1.00 38.65 N
ATOM 23 N3 G B 523 32.613 129.549 107.486 1.00 37.43 N
ATOM 24 C4 G B 523 32.113 129.482 108.735 1.00 39.48 C
ATOM 25 P A B 524 27.963 125.865 105.230 1.00 53.27 P
ATOM 26 OP1 A B 524 26.612 126.356 104.856 1.00 52.26 O
ATOM 27 OP2 A B 524 28.102 124.586 105.978 1.00 53.63 O
ATOM 28 O5' A B 524 28.904 125.795 103.943 1.00 52.11 O
TER

Atoms:
C4: (31.311,132.788,109.765)
N3: (32.056,133.202,110.841)
OP1: (32.617,134.618,105.091)
OP2: (34.530,135.140,103.466)
C2: (33.244,133.883,110.810)
C1': (34.990,134.914,109.436)
C3': (36.502,133.712,108.092)
O5': (34.957,134.054,105.666)
O4': (35.053,135.537,108.162)
C5': (35.930,135.060,105.969)
P: (33.918,134.244,104.481)
C4': (36.225,135.063,107.448)
C2': (36.221,134.011,109.557)
O2': (37.257,134.749,110.175)
N1: (33.719,134.179,109.538)
O4: (30.258,132.187,109.964)
O2: (33.829,134.197,111.833)
C6: (33.021,133.790,108.418)
C5: (31.867,133.116,108.485)
O3': (37.824,133.235,107.857)
OP1: (24.014,128.607,109.377)
OP2: (25.481,129.016,111.436)
C3': (28.005,127.440,107.311)
C1': (29.906,128.503,108.105)
C5': (26.578,129.516,107.832)
O6: (34.611,130.971,110.804)
O4': (28.997,129.534,107.808)
C8: (30.776,129.095,110.438)
C2: (33.793,130.125,107.459)
C6: (33.947,130.524,109.875)
C5: (32.675,129.906,109.916)
C4: (32.113,129.482,108.735)
P: (25.146,129.319,110.022)
C4': (27.817,128.950,107.191)
C2': (29.023,127.320,108.442)
O2': (29.788,126.138,108.377)
N1: (34.440,130.597,108.576)
N2: (34.423,130.275,106.290)
N3: (32.613,129.549,107.486)
N7: (31.828,129.647,110.986)
N9: (30.881,128.988,109.071)
O5': (26.459,129.039,109.174)
O3': (28.633,127.015,106.112)
Image (generated by PyMOL):
PyMOL image
show in jmol