Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0555:0556
Extra
PDB:
ATOM 1 O3' A A 554 3.696 90.643 102.756 1.00 40.66 O
ATOM 2 P U A 555 2.946 90.093 104.062 1.00 40.71 P
ATOM 3 OP1 U A 555 3.628 88.839 104.458 1.00 37.16 O
ATOM 4 OP2 U A 555 1.491 90.065 103.745 1.00 40.98 O
ATOM 5 O5' U A 555 3.151 91.225 105.169 1.00 37.71 O
ATOM 6 C5' U A 555 4.408 91.888 105.352 1.00 39.65 C
ATOM 7 C4' U A 555 4.187 93.289 105.864 1.00 41.33 C
ATOM 8 O4' U A 555 3.357 94.006 104.919 1.00 44.19 O
ATOM 9 C3' U A 555 3.425 93.381 107.171 1.00 42.91 C
ATOM 10 O3' U A 555 4.285 93.250 108.291 1.00 44.64 O
ATOM 11 C2' U A 555 2.795 94.761 107.101 1.00 42.95 C
ATOM 12 O2' U A 555 3.690 95.786 107.464 1.00 41.58 O
ATOM 13 C1' U A 555 2.457 94.855 105.614 1.00 44.32 C
ATOM 14 N1 U A 555 1.088 94.422 105.291 1.00 46.63 N
ATOM 15 C2 U A 555 0.070 95.349 105.409 1.00 47.56 C
ATOM 16 O2 U A 555 0.253 96.486 105.808 1.00 48.80 O
ATOM 17 N3 U A 555 -1.172 94.892 105.046 1.00 48.75 N
ATOM 18 C4 U A 555 -1.493 93.624 104.596 1.00 50.22 C
ATOM 19 O4 U A 555 -2.652 93.376 104.250 1.00 51.04 O
ATOM 20 C5 U A 555 -0.389 92.717 104.529 1.00 48.50 C
ATOM 21 C6 U A 555 0.829 93.135 104.868 1.00 46.53 C
ATOM 22 P G A 556 3.726 92.596 109.643 1.00 44.65 P
ATOM 23 OP1 G A 556 4.722 92.856 110.716 1.00 44.19 O
ATOM 24 OP2 G A 556 3.349 91.191 109.316 1.00 41.58 O
ATOM 25 O5' G A 556 2.413 93.447 109.947 1.00 41.22 O
TER
ATOM 1 O3' U B 555 4.285 93.250 108.291 1.00 44.64 O
ATOM 2 P G B 556 3.726 92.596 109.643 1.00 44.65 P
ATOM 3 OP1 G B 556 4.722 92.856 110.716 1.00 44.19 O
ATOM 4 OP2 G B 556 3.349 91.191 109.316 1.00 41.58 O
ATOM 5 O5' G B 556 2.413 93.447 109.947 1.00 41.22 O
ATOM 6 C5' G B 556 2.504 94.788 110.463 1.00 44.78 C
ATOM 7 C4' G B 556 1.120 95.354 110.703 1.00 47.92 C
ATOM 8 O4' G B 556 0.445 95.552 109.431 1.00 48.86 O
ATOM 9 C3' G B 556 0.166 94.461 111.480 1.00 49.16 C
ATOM 10 O3' G B 556 0.366 94.516 112.882 1.00 51.31 O
ATOM 11 C2' G B 556 -1.190 94.994 111.054 1.00 48.55 C
ATOM 12 O2' G B 556 -1.544 96.205 111.695 1.00 48.73 O
ATOM 13 C1' G B 556 -0.936 95.256 109.572 1.00 47.84 C
ATOM 14 N9 G B 556 -1.240 94.076 108.769 1.00 46.61 N
ATOM 15 C8 G B 556 -0.373 93.088 108.359 1.00 46.46 C
ATOM 16 N7 G B 556 -0.954 92.160 107.648 1.00 45.44 N
ATOM 17 C5 G B 556 -2.283 92.559 107.589 1.00 46.00 C
ATOM 18 C6 G B 556 -3.397 91.956 106.955 1.00 45.07 C
ATOM 19 O6 G B 556 -3.438 90.912 106.300 1.00 45.91 O
ATOM 20 N1 G B 556 -4.554 92.698 107.144 1.00 44.67 N
ATOM 21 C2 G B 556 -4.635 93.870 107.854 1.00 46.05 C
ATOM 22 N2 G B 556 -5.843 94.447 107.923 1.00 46.08 N
ATOM 23 N3 G B 556 -3.609 94.438 108.453 1.00 46.26 N
ATOM 24 C4 G B 556 -2.472 93.737 108.277 1.00 46.16 C
ATOM 25 P A B 557 -0.142 93.300 113.796 1.00 51.37 P
ATOM 26 OP1 A B 557 0.538 93.426 115.102 1.00 51.83 O
ATOM 27 OP2 A B 557 -0.046 92.024 113.033 1.00 50.51 O
ATOM 28 O5' A B 557 -1.681 93.627 114.005 1.00 53.47 O
TER
ATOM 2 P U A 555 2.946 90.093 104.062 1.00 40.71 P
ATOM 3 OP1 U A 555 3.628 88.839 104.458 1.00 37.16 O
ATOM 4 OP2 U A 555 1.491 90.065 103.745 1.00 40.98 O
ATOM 5 O5' U A 555 3.151 91.225 105.169 1.00 37.71 O
ATOM 6 C5' U A 555 4.408 91.888 105.352 1.00 39.65 C
ATOM 7 C4' U A 555 4.187 93.289 105.864 1.00 41.33 C
ATOM 8 O4' U A 555 3.357 94.006 104.919 1.00 44.19 O
ATOM 9 C3' U A 555 3.425 93.381 107.171 1.00 42.91 C
ATOM 10 O3' U A 555 4.285 93.250 108.291 1.00 44.64 O
ATOM 11 C2' U A 555 2.795 94.761 107.101 1.00 42.95 C
ATOM 12 O2' U A 555 3.690 95.786 107.464 1.00 41.58 O
ATOM 13 C1' U A 555 2.457 94.855 105.614 1.00 44.32 C
ATOM 14 N1 U A 555 1.088 94.422 105.291 1.00 46.63 N
ATOM 15 C2 U A 555 0.070 95.349 105.409 1.00 47.56 C
ATOM 16 O2 U A 555 0.253 96.486 105.808 1.00 48.80 O
ATOM 17 N3 U A 555 -1.172 94.892 105.046 1.00 48.75 N
ATOM 18 C4 U A 555 -1.493 93.624 104.596 1.00 50.22 C
ATOM 19 O4 U A 555 -2.652 93.376 104.250 1.00 51.04 O
ATOM 20 C5 U A 555 -0.389 92.717 104.529 1.00 48.50 C
ATOM 21 C6 U A 555 0.829 93.135 104.868 1.00 46.53 C
ATOM 22 P G A 556 3.726 92.596 109.643 1.00 44.65 P
ATOM 23 OP1 G A 556 4.722 92.856 110.716 1.00 44.19 O
ATOM 24 OP2 G A 556 3.349 91.191 109.316 1.00 41.58 O
ATOM 25 O5' G A 556 2.413 93.447 109.947 1.00 41.22 O
TER
ATOM 1 O3' U B 555 4.285 93.250 108.291 1.00 44.64 O
ATOM 2 P G B 556 3.726 92.596 109.643 1.00 44.65 P
ATOM 3 OP1 G B 556 4.722 92.856 110.716 1.00 44.19 O
ATOM 4 OP2 G B 556 3.349 91.191 109.316 1.00 41.58 O
ATOM 5 O5' G B 556 2.413 93.447 109.947 1.00 41.22 O
ATOM 6 C5' G B 556 2.504 94.788 110.463 1.00 44.78 C
ATOM 7 C4' G B 556 1.120 95.354 110.703 1.00 47.92 C
ATOM 8 O4' G B 556 0.445 95.552 109.431 1.00 48.86 O
ATOM 9 C3' G B 556 0.166 94.461 111.480 1.00 49.16 C
ATOM 10 O3' G B 556 0.366 94.516 112.882 1.00 51.31 O
ATOM 11 C2' G B 556 -1.190 94.994 111.054 1.00 48.55 C
ATOM 12 O2' G B 556 -1.544 96.205 111.695 1.00 48.73 O
ATOM 13 C1' G B 556 -0.936 95.256 109.572 1.00 47.84 C
ATOM 14 N9 G B 556 -1.240 94.076 108.769 1.00 46.61 N
ATOM 15 C8 G B 556 -0.373 93.088 108.359 1.00 46.46 C
ATOM 16 N7 G B 556 -0.954 92.160 107.648 1.00 45.44 N
ATOM 17 C5 G B 556 -2.283 92.559 107.589 1.00 46.00 C
ATOM 18 C6 G B 556 -3.397 91.956 106.955 1.00 45.07 C
ATOM 19 O6 G B 556 -3.438 90.912 106.300 1.00 45.91 O
ATOM 20 N1 G B 556 -4.554 92.698 107.144 1.00 44.67 N
ATOM 21 C2 G B 556 -4.635 93.870 107.854 1.00 46.05 C
ATOM 22 N2 G B 556 -5.843 94.447 107.923 1.00 46.08 N
ATOM 23 N3 G B 556 -3.609 94.438 108.453 1.00 46.26 N
ATOM 24 C4 G B 556 -2.472 93.737 108.277 1.00 46.16 C
ATOM 25 P A B 557 -0.142 93.300 113.796 1.00 51.37 P
ATOM 26 OP1 A B 557 0.538 93.426 115.102 1.00 51.83 O
ATOM 27 OP2 A B 557 -0.046 92.024 113.033 1.00 50.51 O
ATOM 28 O5' A B 557 -1.681 93.627 114.005 1.00 53.47 O
TER
Atoms:
C4: (-1.493,93.624,104.596)
N3: (-1.172,94.892,105.046)
OP1: (3.628,88.839,104.458)
OP2: (1.491,90.065,103.745)
C2: (0.070,95.349,105.409)
C1': (2.457,94.855,105.614)
C3': (3.425,93.381,107.171)
O5': (3.151,91.225,105.169)
O4': (3.357,94.006,104.919)
C5': (4.408,91.888,105.352)
P: (2.946,90.093,104.062)
C4': (4.187,93.289,105.864)
C2': (2.795,94.761,107.101)
O2': (3.690,95.786,107.464)
N1: (1.088,94.422,105.291)
O4: (-2.652,93.376,104.250)
O2: (0.253,96.486,105.808)
C6: (0.829,93.135,104.868)
C5: (-0.389,92.717,104.529)
O3': (4.285,93.250,108.291)
N3: (-1.172,94.892,105.046)
OP1: (3.628,88.839,104.458)
OP2: (1.491,90.065,103.745)
C2: (0.070,95.349,105.409)
C1': (2.457,94.855,105.614)
C3': (3.425,93.381,107.171)
O5': (3.151,91.225,105.169)
O4': (3.357,94.006,104.919)
C5': (4.408,91.888,105.352)
P: (2.946,90.093,104.062)
C4': (4.187,93.289,105.864)
C2': (2.795,94.761,107.101)
O2': (3.690,95.786,107.464)
N1: (1.088,94.422,105.291)
O4: (-2.652,93.376,104.250)
O2: (0.253,96.486,105.808)
C6: (0.829,93.135,104.868)
C5: (-0.389,92.717,104.529)
O3': (4.285,93.250,108.291)
OP1: (4.722,92.856,110.716)
OP2: (3.349,91.191,109.316)
C3': (0.166,94.461,111.480)
C1': (-0.936,95.256,109.572)
C5': (2.504,94.788,110.463)
O6: (-3.438,90.912,106.300)
O4': (0.445,95.552,109.431)
C8: (-0.373,93.088,108.359)
C2: (-4.635,93.870,107.854)
C6: (-3.397,91.956,106.955)
C5: (-2.283,92.559,107.589)
C4: (-2.472,93.737,108.277)
P: (3.726,92.596,109.643)
C4': (1.120,95.354,110.703)
C2': (-1.190,94.994,111.054)
O2': (-1.544,96.205,111.695)
N1: (-4.554,92.698,107.144)
N2: (-5.843,94.447,107.923)
N3: (-3.609,94.438,108.453)
N7: (-0.954,92.160,107.648)
N9: (-1.240,94.076,108.769)
O5': (2.413,93.447,109.947)
O3': (0.366,94.516,112.882)
OP2: (3.349,91.191,109.316)
C3': (0.166,94.461,111.480)
C1': (-0.936,95.256,109.572)
C5': (2.504,94.788,110.463)
O6: (-3.438,90.912,106.300)
O4': (0.445,95.552,109.431)
C8: (-0.373,93.088,108.359)
C2: (-4.635,93.870,107.854)
C6: (-3.397,91.956,106.955)
C5: (-2.283,92.559,107.589)
C4: (-2.472,93.737,108.277)
P: (3.726,92.596,109.643)
C4': (1.120,95.354,110.703)
C2': (-1.190,94.994,111.054)
O2': (-1.544,96.205,111.695)
N1: (-4.554,92.698,107.144)
N2: (-5.843,94.447,107.923)
N3: (-3.609,94.438,108.453)
N7: (-0.954,92.160,107.648)
N9: (-1.240,94.076,108.769)
O5': (2.413,93.447,109.947)
O3': (0.366,94.516,112.882)
Image (generated by PyMOL):