ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:B56:B27

Extra

PDB:
ATOM 1 O3' A A 55 69.084 16.500 116.006 1.00 80.67 O
ATOM 2 P A A 56 67.823 17.393 115.553 1.00 79.66 P
ATOM 3 OP1 A A 56 67.425 18.132 116.782 1.00 79.52 O
ATOM 4 OP2 A A 56 66.832 16.548 114.845 1.00 79.14 O
ATOM 5 O5' A A 56 68.411 18.429 114.498 1.00 78.66 O
ATOM 6 C5' A A 56 69.086 17.968 113.328 1.00 77.53 C
ATOM 7 C4' A A 56 69.880 19.084 112.697 1.00 76.48 C
ATOM 8 O4' A A 56 70.856 18.483 111.815 1.00 77.01 O
ATOM 9 C3' A A 56 69.103 20.052 111.809 1.00 75.57 C
ATOM 10 O3' A A 56 68.535 21.150 112.516 1.00 73.77 O
ATOM 11 C2' A A 56 70.172 20.554 110.856 1.00 75.44 C
ATOM 12 O2' A A 56 70.934 21.595 111.415 1.00 75.59 O
ATOM 13 C1' A A 56 71.025 19.299 110.668 1.00 75.87 C
ATOM 14 N9 A A 56 70.604 18.533 109.500 1.00 74.76 N
ATOM 15 C8 A A 56 70.936 18.760 108.189 1.00 74.70 C
ATOM 16 N7 A A 56 70.410 17.901 107.354 1.00 72.69 N
ATOM 17 C5 A A 56 69.683 17.053 108.171 1.00 73.55 C
ATOM 18 C6 A A 56 68.902 15.933 107.895 1.00 74.20 C
ATOM 19 N6 A A 56 68.731 15.455 106.664 1.00 74.16 N
ATOM 20 N1 A A 56 68.301 15.310 108.938 1.00 74.81 N
ATOM 21 C2 A A 56 68.493 15.801 110.173 1.00 74.34 C
ATOM 22 N3 A A 56 69.212 16.845 110.555 1.00 72.83 N
ATOM 23 C4 A A 56 69.788 17.433 109.494 1.00 73.39 C
ATOM 24 P G A 57 67.047 21.656 112.158 1.00 72.98 P
ATOM 25 OP1 G A 57 66.821 22.930 112.883 1.00 72.96 O
ATOM 26 OP2 G A 57 66.129 20.510 112.385 1.00 73.58 O
ATOM 27 O5' G A 57 67.054 21.949 110.592 1.00 71.31 O
TER

ATOM 1 O3' C B 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 2 P U B 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 3 OP1 U B 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 4 OP2 U B 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 5 O5' U B 27 66.907 17.416 99.104 1.00 70.52 O
ATOM 6 C5' U B 27 68.158 17.007 99.665 1.00 70.76 C
ATOM 7 C4' U B 27 68.118 17.071 101.176 1.00 72.29 C
ATOM 8 O4' U B 27 67.069 16.214 101.696 1.00 73.11 O
ATOM 9 C3' U B 27 69.397 16.528 101.783 1.00 73.39 C
ATOM 10 O3' U B 27 70.399 17.535 101.830 1.00 73.81 O
ATOM 11 C2' U B 27 68.956 16.029 103.148 1.00 73.88 C
ATOM 12 O2' U B 27 68.943 17.026 104.144 1.00 73.77 O
ATOM 13 C1' U B 27 67.545 15.509 102.837 1.00 74.69 C
ATOM 14 N1 U B 27 67.484 14.060 102.555 1.00 75.92 N
ATOM 15 C2 U B 27 67.767 13.173 103.591 1.00 76.40 C
ATOM 16 O2 U B 27 68.081 13.538 104.709 1.00 77.33 O
ATOM 17 N3 U B 27 67.674 11.842 103.260 1.00 76.53 N
ATOM 18 C4 U B 27 67.338 11.313 102.030 1.00 76.02 C
ATOM 19 O4 U B 27 67.305 10.090 101.886 1.00 75.37 O
ATOM 20 C5 U B 27 67.071 12.285 101.014 1.00 75.83 C
ATOM 21 C6 U B 27 67.152 13.586 101.300 1.00 75.65 C
ATOM 22 P C B 28 71.725 17.386 100.930 1.00 72.80 P
ATOM 23 OP1 C B 28 72.094 18.742 100.473 1.00 72.86 O
ATOM 24 OP2 C B 28 71.496 16.328 99.932 1.00 73.17 O
ATOM 25 O5' C B 28 72.810 16.869 101.981 1.00 74.72 O
TER

Atoms:
OP1: (67.425,18.132,116.782)
OP2: (66.832,16.548,114.845)
C3': (69.103,20.052,111.809)
C1': (71.025,19.299,110.668)
C5': (69.086,17.968,113.328)
O4': (70.856,18.483,111.815)
C8: (70.936,18.760,108.189)
O2': (70.934,21.595,111.415)
C6: (68.902,15.933,107.895)
C5: (69.683,17.053,108.171)
C4: (69.788,17.433,109.494)
P: (67.823,17.393,115.553)
C4': (69.880,19.084,112.697)
C2': (70.172,20.554,110.856)
C2: (68.493,15.801,110.173)
N1: (68.301,15.310,108.938)
N3: (69.212,16.845,110.555)
N6: (68.731,15.455,106.664)
N7: (70.410,17.901,107.354)
N9: (70.604,18.533,109.500)
O5': (68.411,18.429,114.498)
O3': (68.535,21.150,112.516)
C4: (67.338,11.313,102.030)
N3: (67.674,11.842,103.260)
OP1: (66.821,17.662,96.579)
OP2: (66.759,15.379,97.712)
C2: (67.767,13.173,103.591)
C1': (67.545,15.509,102.837)
C3': (69.397,16.528,101.783)
O5': (66.907,17.416,99.104)
O4': (67.069,16.214,101.696)
C5': (68.158,17.007,99.665)
P: (66.411,16.801,97.722)
C4': (68.118,17.071,101.176)
C2': (68.956,16.029,103.148)
O2': (68.943,17.026,104.144)
N1: (67.484,14.060,102.555)
O4: (67.305,10.090,101.886)
O2: (68.081,13.538,104.709)
C6: (67.152,13.586,101.300)
C5: (67.071,12.285,101.014)
O3': (70.399,17.535,101.830)
Image (generated by PyMOL):
PyMOL image
show in jmol