Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1126:A1125
Extra
PDB:
ATOM 1 O3' U A1125 -89.009 -82.658 -25.240 1.00 0.01 O
ATOM 2 P A A1126 -90.382 -81.874 -25.002 1.00 0.01 P
ATOM 3 OP1 A A1126 -91.452 -82.651 -25.642 1.00 0.01 O
ATOM 4 OP2 A A1126 -90.160 -80.458 -25.410 1.00 0.01 O
ATOM 5 O5' A A1126 -90.538 -81.970 -23.452 1.00 0.01 O
ATOM 6 C5' A A1126 -91.070 -80.904 -22.743 1.00 0.01 C
ATOM 7 C4' A A1126 -90.695 -80.970 -21.312 1.00 0.01 C
ATOM 8 O4' A A1126 -89.504 -81.779 -21.145 1.00 0.01 O
ATOM 9 C3' A A1126 -90.393 -79.617 -20.706 1.00 0.01 C
ATOM 10 O3' A A1126 -91.180 -79.431 -19.554 1.00 0.01 O
ATOM 11 C2' A A1126 -88.920 -79.679 -20.351 1.00 0.01 C
ATOM 12 O2' A A1126 -88.568 -78.960 -19.194 1.00 0.01 O
ATOM 13 C1' A A1126 -88.693 -81.166 -20.182 1.00 0.01 C
ATOM 14 N9 A A1126 -87.297 -81.550 -20.366 1.00 0.01 N
ATOM 15 C8 A A1126 -86.292 -80.765 -20.861 1.00 0.01 C
ATOM 16 N7 A A1126 -85.098 -81.287 -20.803 1.00 0.01 N
ATOM 17 C5 A A1126 -85.329 -82.483 -20.184 1.00 0.01 C
ATOM 18 C6 A A1126 -84.470 -83.513 -19.840 1.00 0.01 C
ATOM 19 N6 A A1126 -83.163 -83.573 -20.050 1.00 0.01 N
ATOM 20 N1 A A1126 -85.039 -84.546 -19.253 1.00 0.01 N
ATOM 21 C2 A A1126 -86.356 -84.527 -19.034 1.00 0.01 C
ATOM 22 N3 A A1126 -87.279 -83.630 -19.318 1.00 0.01 N
ATOM 23 C4 A A1126 -86.668 -82.632 -19.896 1.00 0.01 C
ATOM 24 P A A1127 -92.714 -79.040 -19.752 1.00 0.01 P
ATOM 25 OP1 A A1127 -92.800 -78.172 -20.985 1.00 0.01 O
ATOM 26 OP2 A A1127 -93.195 -78.504 -18.453 1.00 0.01 O
ATOM 27 O5' A A1127 -93.375 -80.462 -20.043 1.00 0.01 O
TER
ATOM 1 O3' G B1124 -84.604 -79.112 -22.899 1.00 0.01 O
ATOM 2 P U B1125 -85.709 -78.939 -24.047 1.00 0.01 P
ATOM 3 OP1 U B1125 -85.298 -77.806 -24.946 1.00 0.01 O
ATOM 4 OP2 U B1125 -87.009 -78.868 -23.373 1.00 0.01 O
ATOM 5 O5' U B1125 -85.560 -80.318 -24.803 1.00 0.01 O
ATOM 6 C5' U B1125 -86.240 -80.583 -25.988 1.00 0.01 C
ATOM 7 C4' U B1125 -86.870 -81.918 -25.922 1.00 0.01 C
ATOM 8 O4' U B1125 -85.849 -82.918 -25.784 1.00 0.01 O
ATOM 9 C3' U B1125 -87.804 -82.111 -24.757 1.00 0.01 C
ATOM 10 O3' U B1125 -89.009 -82.658 -25.240 1.00 0.01 O
ATOM 11 C2' U B1125 -87.077 -83.117 -23.856 1.00 0.01 C
ATOM 12 O2' U B1125 -87.904 -83.982 -23.139 1.00 0.01 O
ATOM 13 C1' U B1125 -86.256 -83.872 -24.843 1.00 0.01 C
ATOM 14 N1 U B1125 -85.064 -84.493 -24.269 1.00 0.01 N
ATOM 15 C2 U B1125 -84.949 -85.854 -24.156 1.00 0.01 C
ATOM 16 O2 U B1125 -85.812 -86.650 -24.486 1.00 0.01 O
ATOM 17 N3 U B1125 -83.768 -86.288 -23.649 1.00 0.01 N
ATOM 18 C4 U B1125 -82.739 -85.522 -23.243 1.00 0.01 C
ATOM 19 O4 U B1125 -81.759 -86.028 -22.778 1.00 0.01 O
ATOM 20 C5 U B1125 -82.913 -84.147 -23.386 1.00 0.01 C
ATOM 21 C6 U B1125 -84.042 -83.697 -23.899 1.00 0.01 C
ATOM 22 P A B1126 -90.382 -81.874 -25.002 1.00 0.01 P
ATOM 23 OP1 A B1126 -91.452 -82.651 -25.642 1.00 0.01 O
ATOM 24 OP2 A B1126 -90.160 -80.458 -25.410 1.00 0.01 O
ATOM 25 O5' A B1126 -90.538 -81.970 -23.452 1.00 0.01 O
TER
ATOM 2 P A A1126 -90.382 -81.874 -25.002 1.00 0.01 P
ATOM 3 OP1 A A1126 -91.452 -82.651 -25.642 1.00 0.01 O
ATOM 4 OP2 A A1126 -90.160 -80.458 -25.410 1.00 0.01 O
ATOM 5 O5' A A1126 -90.538 -81.970 -23.452 1.00 0.01 O
ATOM 6 C5' A A1126 -91.070 -80.904 -22.743 1.00 0.01 C
ATOM 7 C4' A A1126 -90.695 -80.970 -21.312 1.00 0.01 C
ATOM 8 O4' A A1126 -89.504 -81.779 -21.145 1.00 0.01 O
ATOM 9 C3' A A1126 -90.393 -79.617 -20.706 1.00 0.01 C
ATOM 10 O3' A A1126 -91.180 -79.431 -19.554 1.00 0.01 O
ATOM 11 C2' A A1126 -88.920 -79.679 -20.351 1.00 0.01 C
ATOM 12 O2' A A1126 -88.568 -78.960 -19.194 1.00 0.01 O
ATOM 13 C1' A A1126 -88.693 -81.166 -20.182 1.00 0.01 C
ATOM 14 N9 A A1126 -87.297 -81.550 -20.366 1.00 0.01 N
ATOM 15 C8 A A1126 -86.292 -80.765 -20.861 1.00 0.01 C
ATOM 16 N7 A A1126 -85.098 -81.287 -20.803 1.00 0.01 N
ATOM 17 C5 A A1126 -85.329 -82.483 -20.184 1.00 0.01 C
ATOM 18 C6 A A1126 -84.470 -83.513 -19.840 1.00 0.01 C
ATOM 19 N6 A A1126 -83.163 -83.573 -20.050 1.00 0.01 N
ATOM 20 N1 A A1126 -85.039 -84.546 -19.253 1.00 0.01 N
ATOM 21 C2 A A1126 -86.356 -84.527 -19.034 1.00 0.01 C
ATOM 22 N3 A A1126 -87.279 -83.630 -19.318 1.00 0.01 N
ATOM 23 C4 A A1126 -86.668 -82.632 -19.896 1.00 0.01 C
ATOM 24 P A A1127 -92.714 -79.040 -19.752 1.00 0.01 P
ATOM 25 OP1 A A1127 -92.800 -78.172 -20.985 1.00 0.01 O
ATOM 26 OP2 A A1127 -93.195 -78.504 -18.453 1.00 0.01 O
ATOM 27 O5' A A1127 -93.375 -80.462 -20.043 1.00 0.01 O
TER
ATOM 1 O3' G B1124 -84.604 -79.112 -22.899 1.00 0.01 O
ATOM 2 P U B1125 -85.709 -78.939 -24.047 1.00 0.01 P
ATOM 3 OP1 U B1125 -85.298 -77.806 -24.946 1.00 0.01 O
ATOM 4 OP2 U B1125 -87.009 -78.868 -23.373 1.00 0.01 O
ATOM 5 O5' U B1125 -85.560 -80.318 -24.803 1.00 0.01 O
ATOM 6 C5' U B1125 -86.240 -80.583 -25.988 1.00 0.01 C
ATOM 7 C4' U B1125 -86.870 -81.918 -25.922 1.00 0.01 C
ATOM 8 O4' U B1125 -85.849 -82.918 -25.784 1.00 0.01 O
ATOM 9 C3' U B1125 -87.804 -82.111 -24.757 1.00 0.01 C
ATOM 10 O3' U B1125 -89.009 -82.658 -25.240 1.00 0.01 O
ATOM 11 C2' U B1125 -87.077 -83.117 -23.856 1.00 0.01 C
ATOM 12 O2' U B1125 -87.904 -83.982 -23.139 1.00 0.01 O
ATOM 13 C1' U B1125 -86.256 -83.872 -24.843 1.00 0.01 C
ATOM 14 N1 U B1125 -85.064 -84.493 -24.269 1.00 0.01 N
ATOM 15 C2 U B1125 -84.949 -85.854 -24.156 1.00 0.01 C
ATOM 16 O2 U B1125 -85.812 -86.650 -24.486 1.00 0.01 O
ATOM 17 N3 U B1125 -83.768 -86.288 -23.649 1.00 0.01 N
ATOM 18 C4 U B1125 -82.739 -85.522 -23.243 1.00 0.01 C
ATOM 19 O4 U B1125 -81.759 -86.028 -22.778 1.00 0.01 O
ATOM 20 C5 U B1125 -82.913 -84.147 -23.386 1.00 0.01 C
ATOM 21 C6 U B1125 -84.042 -83.697 -23.899 1.00 0.01 C
ATOM 22 P A B1126 -90.382 -81.874 -25.002 1.00 0.01 P
ATOM 23 OP1 A B1126 -91.452 -82.651 -25.642 1.00 0.01 O
ATOM 24 OP2 A B1126 -90.160 -80.458 -25.410 1.00 0.01 O
ATOM 25 O5' A B1126 -90.538 -81.970 -23.452 1.00 0.01 O
TER
Atoms:
OP1: (-91.452,-82.651,-25.642)
OP2: (-90.160,-80.458,-25.410)
C3': (-90.393,-79.617,-20.706)
C1': (-88.693,-81.166,-20.182)
C5': (-91.070,-80.904,-22.743)
O4': (-89.504,-81.779,-21.145)
C8: (-86.292,-80.765,-20.861)
O2': (-88.568,-78.960,-19.194)
C6: (-84.470,-83.513,-19.840)
C5: (-85.329,-82.483,-20.184)
C4: (-86.668,-82.632,-19.896)
P: (-90.382,-81.874,-25.002)
C4': (-90.695,-80.970,-21.312)
C2': (-88.920,-79.679,-20.351)
C2: (-86.356,-84.527,-19.034)
N1: (-85.039,-84.546,-19.253)
N3: (-87.279,-83.630,-19.318)
N6: (-83.163,-83.573,-20.050)
N7: (-85.098,-81.287,-20.803)
N9: (-87.297,-81.550,-20.366)
O5': (-90.538,-81.970,-23.452)
O3': (-91.180,-79.431,-19.554)
OP2: (-90.160,-80.458,-25.410)
C3': (-90.393,-79.617,-20.706)
C1': (-88.693,-81.166,-20.182)
C5': (-91.070,-80.904,-22.743)
O4': (-89.504,-81.779,-21.145)
C8: (-86.292,-80.765,-20.861)
O2': (-88.568,-78.960,-19.194)
C6: (-84.470,-83.513,-19.840)
C5: (-85.329,-82.483,-20.184)
C4: (-86.668,-82.632,-19.896)
P: (-90.382,-81.874,-25.002)
C4': (-90.695,-80.970,-21.312)
C2': (-88.920,-79.679,-20.351)
C2: (-86.356,-84.527,-19.034)
N1: (-85.039,-84.546,-19.253)
N3: (-87.279,-83.630,-19.318)
N6: (-83.163,-83.573,-20.050)
N7: (-85.098,-81.287,-20.803)
N9: (-87.297,-81.550,-20.366)
O5': (-90.538,-81.970,-23.452)
O3': (-91.180,-79.431,-19.554)
C4: (-82.739,-85.522,-23.243)
N3: (-83.768,-86.288,-23.649)
OP1: (-85.298,-77.806,-24.946)
OP2: (-87.009,-78.868,-23.373)
C2: (-84.949,-85.854,-24.156)
C1': (-86.256,-83.872,-24.843)
C3': (-87.804,-82.111,-24.757)
O5': (-85.560,-80.318,-24.803)
O4': (-85.849,-82.918,-25.784)
C5': (-86.240,-80.583,-25.988)
P: (-85.709,-78.939,-24.047)
C4': (-86.870,-81.918,-25.922)
C2': (-87.077,-83.117,-23.856)
O2': (-87.904,-83.982,-23.139)
N1: (-85.064,-84.493,-24.269)
O4: (-81.759,-86.028,-22.778)
O2: (-85.812,-86.650,-24.486)
C6: (-84.042,-83.697,-23.899)
C5: (-82.913,-84.147,-23.386)
O3': (-89.009,-82.658,-25.240)
N3: (-83.768,-86.288,-23.649)
OP1: (-85.298,-77.806,-24.946)
OP2: (-87.009,-78.868,-23.373)
C2: (-84.949,-85.854,-24.156)
C1': (-86.256,-83.872,-24.843)
C3': (-87.804,-82.111,-24.757)
O5': (-85.560,-80.318,-24.803)
O4': (-85.849,-82.918,-25.784)
C5': (-86.240,-80.583,-25.988)
P: (-85.709,-78.939,-24.047)
C4': (-86.870,-81.918,-25.922)
C2': (-87.077,-83.117,-23.856)
O2': (-87.904,-83.982,-23.139)
N1: (-85.064,-84.493,-24.269)
O4: (-81.759,-86.028,-22.778)
O2: (-85.812,-86.650,-24.486)
C6: (-84.042,-83.697,-23.899)
C5: (-82.913,-84.147,-23.386)
O3': (-89.009,-82.658,-25.240)
Image (generated by PyMOL):