Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.132 140.885 -5.470 1.00 73.16 O
ATOM 2 P A A 243 79.544 140.139 -5.639 1.00 74.05 P
ATOM 3 OP1 A A 243 79.292 138.868 -6.381 1.00 72.90 O
ATOM 4 OP2 A A 243 80.187 140.097 -4.297 1.00 74.42 O
ATOM 5 O5' A A 243 80.402 141.119 -6.564 1.00 74.05 O
ATOM 6 C5' A A 243 80.073 141.318 -7.962 1.00 72.94 C
ATOM 7 C4' A A 243 81.014 142.328 -8.584 1.00 71.52 C
ATOM 8 O4' A A 243 80.875 143.595 -7.889 1.00 71.24 O
ATOM 9 C3' A A 243 82.496 142.004 -8.477 1.00 72.36 C
ATOM 10 O3' A A 243 82.924 141.145 -9.528 1.00 73.62 O
ATOM 11 C2' A A 243 83.145 143.377 -8.577 1.00 71.78 C
ATOM 12 O2' A A 243 83.254 143.823 -9.914 1.00 72.17 O
ATOM 13 C1' A A 243 82.137 144.243 -7.816 1.00 71.23 C
ATOM 14 N9 A A 243 82.473 144.449 -6.405 1.00 70.70 N
ATOM 15 C8 A A 243 82.039 143.728 -5.317 1.00 70.89 C
ATOM 16 N7 A A 243 82.507 144.165 -4.173 1.00 70.52 N
ATOM 17 C5 A A 243 83.303 145.244 -4.526 1.00 69.95 C
ATOM 18 C6 A A 243 84.081 146.136 -3.765 1.00 69.55 C
ATOM 19 N6 A A 243 84.188 146.079 -2.437 1.00 69.02 N
ATOM 20 N1 A A 243 84.757 147.099 -4.424 1.00 69.41 N
ATOM 21 C2 A A 243 84.656 147.153 -5.757 1.00 69.76 C
ATOM 22 N3 A A 243 83.961 146.373 -6.584 1.00 70.38 N
ATOM 23 C4 A A 243 83.297 145.427 -5.898 1.00 70.67 C
ATOM 24 P C A 244 84.346 140.400 -9.423 1.00 75.77 P
ATOM 25 OP1 C A 244 84.602 139.738 -10.735 1.00 74.40 O
ATOM 26 OP2 C A 244 84.348 139.584 -8.173 1.00 76.09 O
ATOM 27 O5' C A 244 85.401 141.582 -9.224 1.00 74.27 O
TER
ATOM 1 O3' C B 240 80.374 138.688 3.725 1.00 56.77 O
ATOM 2 P U B 241 79.224 139.287 2.770 1.00 58.43 P
ATOM 3 OP1 U B 241 78.382 140.186 3.609 1.00 58.34 O
ATOM 4 OP2 U B 241 78.584 138.174 2.021 1.00 57.38 O
ATOM 5 O5' U B 241 80.030 140.165 1.709 1.00 60.36 O
ATOM 6 C5' U B 241 80.708 141.378 2.100 1.00 63.26 C
ATOM 7 C4' U B 241 81.332 142.045 0.893 1.00 65.82 C
ATOM 8 O4' U B 241 82.413 141.220 0.376 1.00 67.21 O
ATOM 9 C3' U B 241 80.421 142.228 -0.311 1.00 68.33 C
ATOM 10 O3' U B 241 79.542 143.345 -0.184 1.00 70.30 O
ATOM 11 C2' U B 241 81.423 142.391 -1.448 1.00 68.38 C
ATOM 12 O2' U B 241 81.980 143.691 -1.506 1.00 68.21 O
ATOM 13 C1' U B 241 82.508 141.390 -1.034 1.00 67.83 C
ATOM 14 N1 U B 241 82.379 140.078 -1.694 1.00 66.65 N
ATOM 15 C2 U B 241 83.178 139.831 -2.804 1.00 66.68 C
ATOM 16 O2 U B 241 83.987 140.635 -3.237 1.00 67.16 O
ATOM 17 N3 U B 241 82.993 138.601 -3.391 1.00 65.78 N
ATOM 18 C4 U B 241 82.113 137.615 -3.000 1.00 64.08 C
ATOM 19 O4 U B 241 82.017 136.588 -3.674 1.00 62.18 O
ATOM 20 C5 U B 241 81.337 137.936 -1.844 1.00 64.46 C
ATOM 21 C6 U B 241 81.492 139.124 -1.244 1.00 66.41 C
ATOM 22 P C B 242 77.999 143.188 -0.617 1.00 72.52 P
ATOM 23 OP1 C B 242 77.413 144.546 -0.779 1.00 72.50 O
ATOM 24 OP2 C B 242 77.368 142.227 0.326 1.00 71.89 O
ATOM 25 O5' C B 242 78.079 142.499 -2.052 1.00 71.12 O
TER
ATOM 2 P A A 243 79.544 140.139 -5.639 1.00 74.05 P
ATOM 3 OP1 A A 243 79.292 138.868 -6.381 1.00 72.90 O
ATOM 4 OP2 A A 243 80.187 140.097 -4.297 1.00 74.42 O
ATOM 5 O5' A A 243 80.402 141.119 -6.564 1.00 74.05 O
ATOM 6 C5' A A 243 80.073 141.318 -7.962 1.00 72.94 C
ATOM 7 C4' A A 243 81.014 142.328 -8.584 1.00 71.52 C
ATOM 8 O4' A A 243 80.875 143.595 -7.889 1.00 71.24 O
ATOM 9 C3' A A 243 82.496 142.004 -8.477 1.00 72.36 C
ATOM 10 O3' A A 243 82.924 141.145 -9.528 1.00 73.62 O
ATOM 11 C2' A A 243 83.145 143.377 -8.577 1.00 71.78 C
ATOM 12 O2' A A 243 83.254 143.823 -9.914 1.00 72.17 O
ATOM 13 C1' A A 243 82.137 144.243 -7.816 1.00 71.23 C
ATOM 14 N9 A A 243 82.473 144.449 -6.405 1.00 70.70 N
ATOM 15 C8 A A 243 82.039 143.728 -5.317 1.00 70.89 C
ATOM 16 N7 A A 243 82.507 144.165 -4.173 1.00 70.52 N
ATOM 17 C5 A A 243 83.303 145.244 -4.526 1.00 69.95 C
ATOM 18 C6 A A 243 84.081 146.136 -3.765 1.00 69.55 C
ATOM 19 N6 A A 243 84.188 146.079 -2.437 1.00 69.02 N
ATOM 20 N1 A A 243 84.757 147.099 -4.424 1.00 69.41 N
ATOM 21 C2 A A 243 84.656 147.153 -5.757 1.00 69.76 C
ATOM 22 N3 A A 243 83.961 146.373 -6.584 1.00 70.38 N
ATOM 23 C4 A A 243 83.297 145.427 -5.898 1.00 70.67 C
ATOM 24 P C A 244 84.346 140.400 -9.423 1.00 75.77 P
ATOM 25 OP1 C A 244 84.602 139.738 -10.735 1.00 74.40 O
ATOM 26 OP2 C A 244 84.348 139.584 -8.173 1.00 76.09 O
ATOM 27 O5' C A 244 85.401 141.582 -9.224 1.00 74.27 O
TER
ATOM 1 O3' C B 240 80.374 138.688 3.725 1.00 56.77 O
ATOM 2 P U B 241 79.224 139.287 2.770 1.00 58.43 P
ATOM 3 OP1 U B 241 78.382 140.186 3.609 1.00 58.34 O
ATOM 4 OP2 U B 241 78.584 138.174 2.021 1.00 57.38 O
ATOM 5 O5' U B 241 80.030 140.165 1.709 1.00 60.36 O
ATOM 6 C5' U B 241 80.708 141.378 2.100 1.00 63.26 C
ATOM 7 C4' U B 241 81.332 142.045 0.893 1.00 65.82 C
ATOM 8 O4' U B 241 82.413 141.220 0.376 1.00 67.21 O
ATOM 9 C3' U B 241 80.421 142.228 -0.311 1.00 68.33 C
ATOM 10 O3' U B 241 79.542 143.345 -0.184 1.00 70.30 O
ATOM 11 C2' U B 241 81.423 142.391 -1.448 1.00 68.38 C
ATOM 12 O2' U B 241 81.980 143.691 -1.506 1.00 68.21 O
ATOM 13 C1' U B 241 82.508 141.390 -1.034 1.00 67.83 C
ATOM 14 N1 U B 241 82.379 140.078 -1.694 1.00 66.65 N
ATOM 15 C2 U B 241 83.178 139.831 -2.804 1.00 66.68 C
ATOM 16 O2 U B 241 83.987 140.635 -3.237 1.00 67.16 O
ATOM 17 N3 U B 241 82.993 138.601 -3.391 1.00 65.78 N
ATOM 18 C4 U B 241 82.113 137.615 -3.000 1.00 64.08 C
ATOM 19 O4 U B 241 82.017 136.588 -3.674 1.00 62.18 O
ATOM 20 C5 U B 241 81.337 137.936 -1.844 1.00 64.46 C
ATOM 21 C6 U B 241 81.492 139.124 -1.244 1.00 66.41 C
ATOM 22 P C B 242 77.999 143.188 -0.617 1.00 72.52 P
ATOM 23 OP1 C B 242 77.413 144.546 -0.779 1.00 72.50 O
ATOM 24 OP2 C B 242 77.368 142.227 0.326 1.00 71.89 O
ATOM 25 O5' C B 242 78.079 142.499 -2.052 1.00 71.12 O
TER
Atoms:
OP1: (79.292,138.868,-6.381)
OP2: (80.187,140.097,-4.297)
C3': (82.496,142.004,-8.477)
C1': (82.137,144.243,-7.816)
C5': (80.073,141.318,-7.962)
O4': (80.875,143.595,-7.889)
C8: (82.039,143.728,-5.317)
O2': (83.254,143.823,-9.914)
C6: (84.081,146.136,-3.765)
C5: (83.303,145.244,-4.526)
C4: (83.297,145.427,-5.898)
P: (79.544,140.139,-5.639)
C4': (81.014,142.328,-8.584)
C2': (83.145,143.377,-8.577)
C2: (84.656,147.153,-5.757)
N1: (84.757,147.099,-4.424)
N3: (83.961,146.373,-6.584)
N6: (84.188,146.079,-2.437)
N7: (82.507,144.165,-4.173)
N9: (82.473,144.449,-6.405)
O5': (80.402,141.119,-6.564)
O3': (82.924,141.145,-9.528)
OP2: (80.187,140.097,-4.297)
C3': (82.496,142.004,-8.477)
C1': (82.137,144.243,-7.816)
C5': (80.073,141.318,-7.962)
O4': (80.875,143.595,-7.889)
C8: (82.039,143.728,-5.317)
O2': (83.254,143.823,-9.914)
C6: (84.081,146.136,-3.765)
C5: (83.303,145.244,-4.526)
C4: (83.297,145.427,-5.898)
P: (79.544,140.139,-5.639)
C4': (81.014,142.328,-8.584)
C2': (83.145,143.377,-8.577)
C2: (84.656,147.153,-5.757)
N1: (84.757,147.099,-4.424)
N3: (83.961,146.373,-6.584)
N6: (84.188,146.079,-2.437)
N7: (82.507,144.165,-4.173)
N9: (82.473,144.449,-6.405)
O5': (80.402,141.119,-6.564)
O3': (82.924,141.145,-9.528)
C4: (82.113,137.615,-3.000)
N3: (82.993,138.601,-3.391)
OP1: (78.382,140.186,3.609)
OP2: (78.584,138.174,2.021)
C2: (83.178,139.831,-2.804)
C1': (82.508,141.390,-1.034)
C3': (80.421,142.228,-0.311)
O5': (80.030,140.165,1.709)
O4': (82.413,141.220,0.376)
C5': (80.708,141.378,2.100)
P: (79.224,139.287,2.770)
C4': (81.332,142.045,0.893)
C2': (81.423,142.391,-1.448)
O2': (81.980,143.691,-1.506)
N1: (82.379,140.078,-1.694)
O4: (82.017,136.588,-3.674)
O2: (83.987,140.635,-3.237)
C6: (81.492,139.124,-1.244)
C5: (81.337,137.936,-1.844)
O3': (79.542,143.345,-0.184)
N3: (82.993,138.601,-3.391)
OP1: (78.382,140.186,3.609)
OP2: (78.584,138.174,2.021)
C2: (83.178,139.831,-2.804)
C1': (82.508,141.390,-1.034)
C3': (80.421,142.228,-0.311)
O5': (80.030,140.165,1.709)
O4': (82.413,141.220,0.376)
C5': (80.708,141.378,2.100)
P: (79.224,139.287,2.770)
C4': (81.332,142.045,0.893)
C2': (81.423,142.391,-1.448)
O2': (81.980,143.691,-1.506)
N1: (82.379,140.078,-1.694)
O4: (82.017,136.588,-3.674)
O2: (83.987,140.635,-3.237)
C6: (81.492,139.124,-1.244)
C5: (81.337,137.936,-1.844)
O3': (79.542,143.345,-0.184)
Image (generated by PyMOL):