Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.172 141.020 -5.538 1.00 74.46 O
ATOM 2 P A A 243 79.579 140.261 -5.708 1.00 75.86 P
ATOM 3 OP1 A A 243 79.317 138.970 -6.415 1.00 74.34 O
ATOM 4 OP2 A A 243 80.233 140.251 -4.370 1.00 76.37 O
ATOM 5 O5' A A 243 80.442 141.223 -6.653 1.00 76.09 O
ATOM 6 C5' A A 243 80.169 141.347 -8.077 1.00 75.14 C
ATOM 7 C4' A A 243 81.147 142.313 -8.718 1.00 74.16 C
ATOM 8 O4' A A 243 81.023 143.599 -8.059 1.00 74.21 O
ATOM 9 C3' A A 243 82.624 141.962 -8.584 1.00 74.76 C
ATOM 10 O3' A A 243 83.063 141.094 -9.625 1.00 76.24 O
ATOM 11 C2' A A 243 83.304 143.319 -8.681 1.00 74.41 C
ATOM 12 O2' A A 243 83.449 143.754 -10.017 1.00 74.07 O
ATOM 13 C1' A A 243 82.300 144.211 -7.951 1.00 74.65 C
ATOM 14 N9 A A 243 82.599 144.405 -6.530 1.00 75.21 N
ATOM 15 C8 A A 243 82.147 143.665 -5.462 1.00 76.11 C
ATOM 16 N7 A A 243 82.569 144.102 -4.300 1.00 75.75 N
ATOM 17 C5 A A 243 83.356 145.198 -4.621 1.00 75.11 C
ATOM 18 C6 A A 243 84.092 146.095 -3.830 1.00 74.92 C
ATOM 19 N6 A A 243 84.158 146.029 -2.500 1.00 75.11 N
ATOM 20 N1 A A 243 84.772 147.075 -4.461 1.00 75.27 N
ATOM 21 C2 A A 243 84.713 147.137 -5.797 1.00 75.63 C
ATOM 22 N3 A A 243 84.059 146.352 -6.651 1.00 75.68 N
ATOM 23 C4 A A 243 83.391 145.391 -5.992 1.00 75.52 C
ATOM 24 P C A 244 84.485 140.348 -9.499 1.00 78.75 P
ATOM 25 OP1 C A 244 84.759 139.674 -10.803 1.00 77.43 O
ATOM 26 OP2 C A 244 84.474 139.541 -8.243 1.00 79.35 O
ATOM 27 O5' C A 244 85.541 141.529 -9.302 1.00 77.30 O
TER
ATOM 1 O3' C B 240 80.499 138.721 3.706 1.00 55.68 O
ATOM 2 P U B 241 79.372 139.336 2.744 1.00 58.63 P
ATOM 3 OP1 U B 241 78.507 140.227 3.574 1.00 58.62 O
ATOM 4 OP2 U B 241 78.751 138.230 1.959 1.00 57.96 O
ATOM 5 O5' U B 241 80.206 140.224 1.716 1.00 60.72 O
ATOM 6 C5' U B 241 80.764 141.493 2.106 1.00 64.23 C
ATOM 7 C4' U B 241 81.344 142.195 0.901 1.00 67.26 C
ATOM 8 O4' U B 241 82.468 141.425 0.397 1.00 68.05 O
ATOM 9 C3' U B 241 80.422 142.314 -0.305 1.00 69.42 C
ATOM 10 O3' U B 241 79.484 143.384 -0.189 1.00 71.13 O
ATOM 11 C2' U B 241 81.413 142.510 -1.445 1.00 69.38 C
ATOM 12 O2' U B 241 81.904 143.837 -1.512 1.00 69.22 O
ATOM 13 C1' U B 241 82.544 141.567 -1.017 1.00 69.38 C
ATOM 14 N1 U B 241 82.473 140.233 -1.639 1.00 68.74 N
ATOM 15 C2 U B 241 83.347 139.961 -2.683 1.00 68.73 C
ATOM 16 O2 U B 241 84.178 140.761 -3.083 1.00 69.62 O
ATOM 17 N3 U B 241 83.212 138.714 -3.245 1.00 67.65 N
ATOM 18 C4 U B 241 82.316 137.733 -2.886 1.00 66.05 C
ATOM 19 O4 U B 241 82.305 136.670 -3.505 1.00 65.12 O
ATOM 20 C5 U B 241 81.464 138.076 -1.791 1.00 66.65 C
ATOM 21 C6 U B 241 81.568 139.282 -1.217 1.00 68.25 C
ATOM 22 P C B 242 77.947 143.139 -0.606 1.00 73.18 P
ATOM 23 OP1 C B 242 77.254 144.455 -0.640 1.00 73.08 O
ATOM 24 OP2 C B 242 77.409 142.049 0.255 1.00 72.76 O
ATOM 25 O5' C B 242 78.044 142.577 -2.094 1.00 72.42 O
TER
ATOM 2 P A A 243 79.579 140.261 -5.708 1.00 75.86 P
ATOM 3 OP1 A A 243 79.317 138.970 -6.415 1.00 74.34 O
ATOM 4 OP2 A A 243 80.233 140.251 -4.370 1.00 76.37 O
ATOM 5 O5' A A 243 80.442 141.223 -6.653 1.00 76.09 O
ATOM 6 C5' A A 243 80.169 141.347 -8.077 1.00 75.14 C
ATOM 7 C4' A A 243 81.147 142.313 -8.718 1.00 74.16 C
ATOM 8 O4' A A 243 81.023 143.599 -8.059 1.00 74.21 O
ATOM 9 C3' A A 243 82.624 141.962 -8.584 1.00 74.76 C
ATOM 10 O3' A A 243 83.063 141.094 -9.625 1.00 76.24 O
ATOM 11 C2' A A 243 83.304 143.319 -8.681 1.00 74.41 C
ATOM 12 O2' A A 243 83.449 143.754 -10.017 1.00 74.07 O
ATOM 13 C1' A A 243 82.300 144.211 -7.951 1.00 74.65 C
ATOM 14 N9 A A 243 82.599 144.405 -6.530 1.00 75.21 N
ATOM 15 C8 A A 243 82.147 143.665 -5.462 1.00 76.11 C
ATOM 16 N7 A A 243 82.569 144.102 -4.300 1.00 75.75 N
ATOM 17 C5 A A 243 83.356 145.198 -4.621 1.00 75.11 C
ATOM 18 C6 A A 243 84.092 146.095 -3.830 1.00 74.92 C
ATOM 19 N6 A A 243 84.158 146.029 -2.500 1.00 75.11 N
ATOM 20 N1 A A 243 84.772 147.075 -4.461 1.00 75.27 N
ATOM 21 C2 A A 243 84.713 147.137 -5.797 1.00 75.63 C
ATOM 22 N3 A A 243 84.059 146.352 -6.651 1.00 75.68 N
ATOM 23 C4 A A 243 83.391 145.391 -5.992 1.00 75.52 C
ATOM 24 P C A 244 84.485 140.348 -9.499 1.00 78.75 P
ATOM 25 OP1 C A 244 84.759 139.674 -10.803 1.00 77.43 O
ATOM 26 OP2 C A 244 84.474 139.541 -8.243 1.00 79.35 O
ATOM 27 O5' C A 244 85.541 141.529 -9.302 1.00 77.30 O
TER
ATOM 1 O3' C B 240 80.499 138.721 3.706 1.00 55.68 O
ATOM 2 P U B 241 79.372 139.336 2.744 1.00 58.63 P
ATOM 3 OP1 U B 241 78.507 140.227 3.574 1.00 58.62 O
ATOM 4 OP2 U B 241 78.751 138.230 1.959 1.00 57.96 O
ATOM 5 O5' U B 241 80.206 140.224 1.716 1.00 60.72 O
ATOM 6 C5' U B 241 80.764 141.493 2.106 1.00 64.23 C
ATOM 7 C4' U B 241 81.344 142.195 0.901 1.00 67.26 C
ATOM 8 O4' U B 241 82.468 141.425 0.397 1.00 68.05 O
ATOM 9 C3' U B 241 80.422 142.314 -0.305 1.00 69.42 C
ATOM 10 O3' U B 241 79.484 143.384 -0.189 1.00 71.13 O
ATOM 11 C2' U B 241 81.413 142.510 -1.445 1.00 69.38 C
ATOM 12 O2' U B 241 81.904 143.837 -1.512 1.00 69.22 O
ATOM 13 C1' U B 241 82.544 141.567 -1.017 1.00 69.38 C
ATOM 14 N1 U B 241 82.473 140.233 -1.639 1.00 68.74 N
ATOM 15 C2 U B 241 83.347 139.961 -2.683 1.00 68.73 C
ATOM 16 O2 U B 241 84.178 140.761 -3.083 1.00 69.62 O
ATOM 17 N3 U B 241 83.212 138.714 -3.245 1.00 67.65 N
ATOM 18 C4 U B 241 82.316 137.733 -2.886 1.00 66.05 C
ATOM 19 O4 U B 241 82.305 136.670 -3.505 1.00 65.12 O
ATOM 20 C5 U B 241 81.464 138.076 -1.791 1.00 66.65 C
ATOM 21 C6 U B 241 81.568 139.282 -1.217 1.00 68.25 C
ATOM 22 P C B 242 77.947 143.139 -0.606 1.00 73.18 P
ATOM 23 OP1 C B 242 77.254 144.455 -0.640 1.00 73.08 O
ATOM 24 OP2 C B 242 77.409 142.049 0.255 1.00 72.76 O
ATOM 25 O5' C B 242 78.044 142.577 -2.094 1.00 72.42 O
TER
Atoms:
OP1: (79.317,138.970,-6.415)
OP2: (80.233,140.251,-4.370)
C3': (82.624,141.962,-8.584)
C1': (82.300,144.211,-7.951)
C5': (80.169,141.347,-8.077)
O4': (81.023,143.599,-8.059)
C8: (82.147,143.665,-5.462)
O2': (83.449,143.754,-10.017)
C6: (84.092,146.095,-3.830)
C5: (83.356,145.198,-4.621)
C4: (83.391,145.391,-5.992)
P: (79.579,140.261,-5.708)
C4': (81.147,142.313,-8.718)
C2': (83.304,143.319,-8.681)
C2: (84.713,147.137,-5.797)
N1: (84.772,147.075,-4.461)
N3: (84.059,146.352,-6.651)
N6: (84.158,146.029,-2.500)
N7: (82.569,144.102,-4.300)
N9: (82.599,144.405,-6.530)
O5': (80.442,141.223,-6.653)
O3': (83.063,141.094,-9.625)
OP2: (80.233,140.251,-4.370)
C3': (82.624,141.962,-8.584)
C1': (82.300,144.211,-7.951)
C5': (80.169,141.347,-8.077)
O4': (81.023,143.599,-8.059)
C8: (82.147,143.665,-5.462)
O2': (83.449,143.754,-10.017)
C6: (84.092,146.095,-3.830)
C5: (83.356,145.198,-4.621)
C4: (83.391,145.391,-5.992)
P: (79.579,140.261,-5.708)
C4': (81.147,142.313,-8.718)
C2': (83.304,143.319,-8.681)
C2: (84.713,147.137,-5.797)
N1: (84.772,147.075,-4.461)
N3: (84.059,146.352,-6.651)
N6: (84.158,146.029,-2.500)
N7: (82.569,144.102,-4.300)
N9: (82.599,144.405,-6.530)
O5': (80.442,141.223,-6.653)
O3': (83.063,141.094,-9.625)
C4: (82.316,137.733,-2.886)
N3: (83.212,138.714,-3.245)
OP1: (78.507,140.227,3.574)
OP2: (78.751,138.230,1.959)
C2: (83.347,139.961,-2.683)
C1': (82.544,141.567,-1.017)
C3': (80.422,142.314,-0.305)
O5': (80.206,140.224,1.716)
O4': (82.468,141.425,0.397)
C5': (80.764,141.493,2.106)
P: (79.372,139.336,2.744)
C4': (81.344,142.195,0.901)
C2': (81.413,142.510,-1.445)
O2': (81.904,143.837,-1.512)
N1: (82.473,140.233,-1.639)
O4: (82.305,136.670,-3.505)
O2: (84.178,140.761,-3.083)
C6: (81.568,139.282,-1.217)
C5: (81.464,138.076,-1.791)
O3': (79.484,143.384,-0.189)
N3: (83.212,138.714,-3.245)
OP1: (78.507,140.227,3.574)
OP2: (78.751,138.230,1.959)
C2: (83.347,139.961,-2.683)
C1': (82.544,141.567,-1.017)
C3': (80.422,142.314,-0.305)
O5': (80.206,140.224,1.716)
O4': (82.468,141.425,0.397)
C5': (80.764,141.493,2.106)
P: (79.372,139.336,2.744)
C4': (81.344,142.195,0.901)
C2': (81.413,142.510,-1.445)
O2': (81.904,143.837,-1.512)
N1: (82.473,140.233,-1.639)
O4: (82.305,136.670,-3.505)
O2: (84.178,140.761,-3.083)
C6: (81.568,139.282,-1.217)
C5: (81.464,138.076,-1.791)
O3': (79.484,143.384,-0.189)
Image (generated by PyMOL):