Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.285 140.869 -5.477 1.00 87.80 O
ATOM 2 P A A 243 79.711 140.139 -5.579 1.00 88.35 P
ATOM 3 OP1 A A 243 79.503 138.843 -6.284 1.00 87.51 O
ATOM 4 OP2 A A 243 80.311 140.151 -4.220 1.00 88.83 O
ATOM 5 O5' A A 243 80.581 141.102 -6.512 1.00 88.78 O
ATOM 6 C5' A A 243 80.237 141.314 -7.905 1.00 88.40 C
ATOM 7 C4' A A 243 81.139 142.363 -8.523 1.00 87.49 C
ATOM 8 O4' A A 243 80.960 143.625 -7.827 1.00 87.68 O
ATOM 9 C3' A A 243 82.634 142.102 -8.434 1.00 87.76 C
ATOM 10 O3' A A 243 83.086 141.247 -9.479 1.00 88.23 O
ATOM 11 C2' A A 243 83.220 143.501 -8.561 1.00 87.48 C
ATOM 12 O2' A A 243 83.263 143.948 -9.900 1.00 87.83 O
ATOM 13 C1' A A 243 82.194 144.327 -7.782 1.00 87.25 C
ATOM 14 N9 A A 243 82.559 144.539 -6.380 1.00 87.35 N
ATOM 15 C8 A A 243 82.177 143.804 -5.284 1.00 87.36 C
ATOM 16 N7 A A 243 82.665 144.247 -4.153 1.00 87.16 N
ATOM 17 C5 A A 243 83.422 145.347 -4.525 1.00 86.54 C
ATOM 18 C6 A A 243 84.197 146.252 -3.784 1.00 86.55 C
ATOM 19 N6 A A 243 84.351 146.188 -2.462 1.00 86.21 N
ATOM 20 N1 A A 243 84.824 147.239 -4.457 1.00 86.96 N
ATOM 21 C2 A A 243 84.680 147.297 -5.786 1.00 87.50 C
ATOM 22 N3 A A 243 83.984 146.503 -6.595 1.00 87.45 N
ATOM 23 C4 A A 243 83.369 145.537 -5.893 1.00 87.22 C
ATOM 24 P C A 244 84.468 140.444 -9.310 1.00 89.02 P
ATOM 25 OP1 C A 244 84.736 139.729 -10.589 1.00 88.35 O
ATOM 26 OP2 C A 244 84.406 139.673 -8.035 1.00 89.66 O
ATOM 27 O5' C A 244 85.565 141.586 -9.128 1.00 87.56 O
TER
ATOM 1 O3' C B 240 80.467 138.772 3.763 1.00 61.77 O
ATOM 2 P U B 241 79.293 139.309 2.811 1.00 65.00 P
ATOM 3 OP1 U B 241 78.396 140.174 3.626 1.00 64.69 O
ATOM 4 OP2 U B 241 78.720 138.152 2.068 1.00 63.71 O
ATOM 5 O5' U B 241 80.061 140.221 1.754 1.00 67.48 O
ATOM 6 C5' U B 241 80.691 141.452 2.153 1.00 71.59 C
ATOM 7 C4' U B 241 81.341 142.120 0.962 1.00 74.65 C
ATOM 8 O4' U B 241 82.455 141.314 0.488 1.00 75.09 O
ATOM 9 C3' U B 241 80.469 142.275 -0.273 1.00 77.25 C
ATOM 10 O3' U B 241 79.556 143.365 -0.175 1.00 80.85 O
ATOM 11 C2' U B 241 81.509 142.459 -1.370 1.00 76.88 C
ATOM 12 O2' U B 241 82.053 143.766 -1.397 1.00 76.69 O
ATOM 13 C1' U B 241 82.590 141.473 -0.919 1.00 76.23 C
ATOM 14 N1 U B 241 82.471 140.155 -1.566 1.00 74.85 N
ATOM 15 C2 U B 241 83.201 139.939 -2.724 1.00 74.64 C
ATOM 16 O2 U B 241 83.939 140.778 -3.211 1.00 75.30 O
ATOM 17 N3 U B 241 83.035 138.699 -3.293 1.00 73.74 N
ATOM 18 C4 U B 241 82.230 137.679 -2.840 1.00 71.90 C
ATOM 19 O4 U B 241 82.178 136.626 -3.472 1.00 70.44 O
ATOM 20 C5 U B 241 81.518 137.973 -1.638 1.00 72.99 C
ATOM 21 C6 U B 241 81.658 139.168 -1.056 1.00 74.61 C
ATOM 22 P C B 242 78.020 143.146 -0.604 1.00 83.21 P
ATOM 23 OP1 C B 242 77.352 144.469 -0.652 1.00 83.21 O
ATOM 24 OP2 C B 242 77.461 142.074 0.264 1.00 83.18 O
ATOM 25 O5' C B 242 78.128 142.570 -2.086 1.00 83.80 O
TER
ATOM 2 P A A 243 79.711 140.139 -5.579 1.00 88.35 P
ATOM 3 OP1 A A 243 79.503 138.843 -6.284 1.00 87.51 O
ATOM 4 OP2 A A 243 80.311 140.151 -4.220 1.00 88.83 O
ATOM 5 O5' A A 243 80.581 141.102 -6.512 1.00 88.78 O
ATOM 6 C5' A A 243 80.237 141.314 -7.905 1.00 88.40 C
ATOM 7 C4' A A 243 81.139 142.363 -8.523 1.00 87.49 C
ATOM 8 O4' A A 243 80.960 143.625 -7.827 1.00 87.68 O
ATOM 9 C3' A A 243 82.634 142.102 -8.434 1.00 87.76 C
ATOM 10 O3' A A 243 83.086 141.247 -9.479 1.00 88.23 O
ATOM 11 C2' A A 243 83.220 143.501 -8.561 1.00 87.48 C
ATOM 12 O2' A A 243 83.263 143.948 -9.900 1.00 87.83 O
ATOM 13 C1' A A 243 82.194 144.327 -7.782 1.00 87.25 C
ATOM 14 N9 A A 243 82.559 144.539 -6.380 1.00 87.35 N
ATOM 15 C8 A A 243 82.177 143.804 -5.284 1.00 87.36 C
ATOM 16 N7 A A 243 82.665 144.247 -4.153 1.00 87.16 N
ATOM 17 C5 A A 243 83.422 145.347 -4.525 1.00 86.54 C
ATOM 18 C6 A A 243 84.197 146.252 -3.784 1.00 86.55 C
ATOM 19 N6 A A 243 84.351 146.188 -2.462 1.00 86.21 N
ATOM 20 N1 A A 243 84.824 147.239 -4.457 1.00 86.96 N
ATOM 21 C2 A A 243 84.680 147.297 -5.786 1.00 87.50 C
ATOM 22 N3 A A 243 83.984 146.503 -6.595 1.00 87.45 N
ATOM 23 C4 A A 243 83.369 145.537 -5.893 1.00 87.22 C
ATOM 24 P C A 244 84.468 140.444 -9.310 1.00 89.02 P
ATOM 25 OP1 C A 244 84.736 139.729 -10.589 1.00 88.35 O
ATOM 26 OP2 C A 244 84.406 139.673 -8.035 1.00 89.66 O
ATOM 27 O5' C A 244 85.565 141.586 -9.128 1.00 87.56 O
TER
ATOM 1 O3' C B 240 80.467 138.772 3.763 1.00 61.77 O
ATOM 2 P U B 241 79.293 139.309 2.811 1.00 65.00 P
ATOM 3 OP1 U B 241 78.396 140.174 3.626 1.00 64.69 O
ATOM 4 OP2 U B 241 78.720 138.152 2.068 1.00 63.71 O
ATOM 5 O5' U B 241 80.061 140.221 1.754 1.00 67.48 O
ATOM 6 C5' U B 241 80.691 141.452 2.153 1.00 71.59 C
ATOM 7 C4' U B 241 81.341 142.120 0.962 1.00 74.65 C
ATOM 8 O4' U B 241 82.455 141.314 0.488 1.00 75.09 O
ATOM 9 C3' U B 241 80.469 142.275 -0.273 1.00 77.25 C
ATOM 10 O3' U B 241 79.556 143.365 -0.175 1.00 80.85 O
ATOM 11 C2' U B 241 81.509 142.459 -1.370 1.00 76.88 C
ATOM 12 O2' U B 241 82.053 143.766 -1.397 1.00 76.69 O
ATOM 13 C1' U B 241 82.590 141.473 -0.919 1.00 76.23 C
ATOM 14 N1 U B 241 82.471 140.155 -1.566 1.00 74.85 N
ATOM 15 C2 U B 241 83.201 139.939 -2.724 1.00 74.64 C
ATOM 16 O2 U B 241 83.939 140.778 -3.211 1.00 75.30 O
ATOM 17 N3 U B 241 83.035 138.699 -3.293 1.00 73.74 N
ATOM 18 C4 U B 241 82.230 137.679 -2.840 1.00 71.90 C
ATOM 19 O4 U B 241 82.178 136.626 -3.472 1.00 70.44 O
ATOM 20 C5 U B 241 81.518 137.973 -1.638 1.00 72.99 C
ATOM 21 C6 U B 241 81.658 139.168 -1.056 1.00 74.61 C
ATOM 22 P C B 242 78.020 143.146 -0.604 1.00 83.21 P
ATOM 23 OP1 C B 242 77.352 144.469 -0.652 1.00 83.21 O
ATOM 24 OP2 C B 242 77.461 142.074 0.264 1.00 83.18 O
ATOM 25 O5' C B 242 78.128 142.570 -2.086 1.00 83.80 O
TER
Atoms:
OP1: (79.503,138.843,-6.284)
OP2: (80.311,140.151,-4.220)
C3': (82.634,142.102,-8.434)
C1': (82.194,144.327,-7.782)
C5': (80.237,141.314,-7.905)
O4': (80.960,143.625,-7.827)
C8: (82.177,143.804,-5.284)
O2': (83.263,143.948,-9.900)
C6: (84.197,146.252,-3.784)
C5: (83.422,145.347,-4.525)
C4: (83.369,145.537,-5.893)
P: (79.711,140.139,-5.579)
C4': (81.139,142.363,-8.523)
C2': (83.220,143.501,-8.561)
C2: (84.680,147.297,-5.786)
N1: (84.824,147.239,-4.457)
N3: (83.984,146.503,-6.595)
N6: (84.351,146.188,-2.462)
N7: (82.665,144.247,-4.153)
N9: (82.559,144.539,-6.380)
O5': (80.581,141.102,-6.512)
O3': (83.086,141.247,-9.479)
OP2: (80.311,140.151,-4.220)
C3': (82.634,142.102,-8.434)
C1': (82.194,144.327,-7.782)
C5': (80.237,141.314,-7.905)
O4': (80.960,143.625,-7.827)
C8: (82.177,143.804,-5.284)
O2': (83.263,143.948,-9.900)
C6: (84.197,146.252,-3.784)
C5: (83.422,145.347,-4.525)
C4: (83.369,145.537,-5.893)
P: (79.711,140.139,-5.579)
C4': (81.139,142.363,-8.523)
C2': (83.220,143.501,-8.561)
C2: (84.680,147.297,-5.786)
N1: (84.824,147.239,-4.457)
N3: (83.984,146.503,-6.595)
N6: (84.351,146.188,-2.462)
N7: (82.665,144.247,-4.153)
N9: (82.559,144.539,-6.380)
O5': (80.581,141.102,-6.512)
O3': (83.086,141.247,-9.479)
C4: (82.230,137.679,-2.840)
N3: (83.035,138.699,-3.293)
OP1: (78.396,140.174,3.626)
OP2: (78.720,138.152,2.068)
C2: (83.201,139.939,-2.724)
C1': (82.590,141.473,-0.919)
C3': (80.469,142.275,-0.273)
O5': (80.061,140.221,1.754)
O4': (82.455,141.314,0.488)
C5': (80.691,141.452,2.153)
P: (79.293,139.309,2.811)
C4': (81.341,142.120,0.962)
C2': (81.509,142.459,-1.370)
O2': (82.053,143.766,-1.397)
N1: (82.471,140.155,-1.566)
O4: (82.178,136.626,-3.472)
O2: (83.939,140.778,-3.211)
C6: (81.658,139.168,-1.056)
C5: (81.518,137.973,-1.638)
O3': (79.556,143.365,-0.175)
N3: (83.035,138.699,-3.293)
OP1: (78.396,140.174,3.626)
OP2: (78.720,138.152,2.068)
C2: (83.201,139.939,-2.724)
C1': (82.590,141.473,-0.919)
C3': (80.469,142.275,-0.273)
O5': (80.061,140.221,1.754)
O4': (82.455,141.314,0.488)
C5': (80.691,141.452,2.153)
P: (79.293,139.309,2.811)
C4': (81.341,142.120,0.962)
C2': (81.509,142.459,-1.370)
O2': (82.053,143.766,-1.397)
N1: (82.471,140.155,-1.566)
O4: (82.178,136.626,-3.472)
O2: (83.939,140.778,-3.211)
C6: (81.658,139.168,-1.056)
C5: (81.518,137.973,-1.638)
O3': (79.556,143.365,-0.175)
Image (generated by PyMOL):