Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.227 140.859 -5.490 1.00 86.87 O
ATOM 2 P A A 243 79.643 140.113 -5.630 1.00 88.14 P
ATOM 3 OP1 A A 243 79.410 138.828 -6.351 1.00 86.52 O
ATOM 4 OP2 A A 243 80.268 140.096 -4.282 1.00 88.41 O
ATOM 5 O5' A A 243 80.509 141.080 -6.563 1.00 88.54 O
ATOM 6 C5' A A 243 80.168 141.288 -7.958 1.00 88.65 C
ATOM 7 C4' A A 243 81.075 142.333 -8.578 1.00 87.97 C
ATOM 8 O4' A A 243 80.916 143.590 -7.870 1.00 87.81 O
ATOM 9 C3' A A 243 82.569 142.051 -8.513 1.00 88.43 C
ATOM 10 O3' A A 243 82.987 141.220 -9.593 1.00 89.66 O
ATOM 11 C2' A A 243 83.173 143.446 -8.614 1.00 88.27 C
ATOM 12 O2' A A 243 83.226 143.916 -9.946 1.00 88.58 O
ATOM 13 C1' A A 243 82.157 144.275 -7.825 1.00 87.96 C
ATOM 14 N9 A A 243 82.518 144.491 -6.422 1.00 88.10 N
ATOM 15 C8 A A 243 82.132 143.760 -5.325 1.00 88.06 C
ATOM 16 N7 A A 243 82.608 144.215 -4.192 1.00 87.82 N
ATOM 17 C5 A A 243 83.361 145.318 -4.564 1.00 87.30 C
ATOM 18 C6 A A 243 84.125 146.235 -3.822 1.00 87.48 C
ATOM 19 N6 A A 243 84.266 146.182 -2.496 1.00 86.81 N
ATOM 20 N1 A A 243 84.753 147.219 -4.498 1.00 87.42 N
ATOM 21 C2 A A 243 84.622 147.265 -5.829 1.00 87.62 C
ATOM 22 N3 A A 243 83.938 146.461 -6.638 1.00 87.77 N
ATOM 23 C4 A A 243 83.320 145.497 -5.935 1.00 87.97 C
ATOM 24 P C A 244 84.361 140.392 -9.482 1.00 91.24 P
ATOM 25 OP1 C A 244 84.587 139.722 -10.793 1.00 90.74 O
ATOM 26 OP2 C A 244 84.310 139.573 -8.241 1.00 92.28 O
ATOM 27 O5' C A 244 85.483 141.509 -9.282 1.00 90.70 O
TER
ATOM 1 O3' C B 240 80.273 138.717 3.739 1.00 63.21 O
ATOM 2 P U B 241 79.137 139.293 2.764 1.00 65.73 P
ATOM 3 OP1 U B 241 78.266 140.193 3.571 1.00 65.75 O
ATOM 4 OP2 U B 241 78.529 138.158 2.022 1.00 64.31 O
ATOM 5 O5' U B 241 79.960 140.172 1.718 1.00 67.50 O
ATOM 6 C5' U B 241 80.625 141.385 2.127 1.00 71.35 C
ATOM 7 C4' U B 241 81.301 142.043 0.943 1.00 73.88 C
ATOM 8 O4' U B 241 82.398 141.214 0.474 1.00 74.37 O
ATOM 9 C3' U B 241 80.447 142.232 -0.300 1.00 76.09 C
ATOM 10 O3' U B 241 79.566 143.346 -0.206 1.00 79.67 O
ATOM 11 C2' U B 241 81.502 142.400 -1.384 1.00 75.59 C
ATOM 12 O2' U B 241 82.078 143.693 -1.402 1.00 74.39 O
ATOM 13 C1' U B 241 82.555 141.384 -0.929 1.00 75.01 C
ATOM 14 N1 U B 241 82.412 140.078 -1.595 1.00 73.77 N
ATOM 15 C2 U B 241 83.121 139.875 -2.769 1.00 73.72 C
ATOM 16 O2 U B 241 83.866 140.712 -3.250 1.00 74.87 O
ATOM 17 N3 U B 241 82.924 138.653 -3.362 1.00 73.05 N
ATOM 18 C4 U B 241 82.109 137.637 -2.919 1.00 71.46 C
ATOM 19 O4 U B 241 82.023 136.602 -3.578 1.00 69.90 O
ATOM 20 C5 U B 241 81.427 137.912 -1.695 1.00 72.17 C
ATOM 21 C6 U B 241 81.597 139.092 -1.089 1.00 73.35 C
ATOM 22 P C B 242 78.025 143.170 -0.637 1.00 82.28 P
ATOM 23 OP1 C B 242 77.421 144.520 -0.780 1.00 82.27 O
ATOM 24 OP2 C B 242 77.409 142.188 0.293 1.00 82.36 O
ATOM 25 O5' C B 242 78.119 142.497 -2.078 1.00 82.12 O
TER
ATOM 2 P A A 243 79.643 140.113 -5.630 1.00 88.14 P
ATOM 3 OP1 A A 243 79.410 138.828 -6.351 1.00 86.52 O
ATOM 4 OP2 A A 243 80.268 140.096 -4.282 1.00 88.41 O
ATOM 5 O5' A A 243 80.509 141.080 -6.563 1.00 88.54 O
ATOM 6 C5' A A 243 80.168 141.288 -7.958 1.00 88.65 C
ATOM 7 C4' A A 243 81.075 142.333 -8.578 1.00 87.97 C
ATOM 8 O4' A A 243 80.916 143.590 -7.870 1.00 87.81 O
ATOM 9 C3' A A 243 82.569 142.051 -8.513 1.00 88.43 C
ATOM 10 O3' A A 243 82.987 141.220 -9.593 1.00 89.66 O
ATOM 11 C2' A A 243 83.173 143.446 -8.614 1.00 88.27 C
ATOM 12 O2' A A 243 83.226 143.916 -9.946 1.00 88.58 O
ATOM 13 C1' A A 243 82.157 144.275 -7.825 1.00 87.96 C
ATOM 14 N9 A A 243 82.518 144.491 -6.422 1.00 88.10 N
ATOM 15 C8 A A 243 82.132 143.760 -5.325 1.00 88.06 C
ATOM 16 N7 A A 243 82.608 144.215 -4.192 1.00 87.82 N
ATOM 17 C5 A A 243 83.361 145.318 -4.564 1.00 87.30 C
ATOM 18 C6 A A 243 84.125 146.235 -3.822 1.00 87.48 C
ATOM 19 N6 A A 243 84.266 146.182 -2.496 1.00 86.81 N
ATOM 20 N1 A A 243 84.753 147.219 -4.498 1.00 87.42 N
ATOM 21 C2 A A 243 84.622 147.265 -5.829 1.00 87.62 C
ATOM 22 N3 A A 243 83.938 146.461 -6.638 1.00 87.77 N
ATOM 23 C4 A A 243 83.320 145.497 -5.935 1.00 87.97 C
ATOM 24 P C A 244 84.361 140.392 -9.482 1.00 91.24 P
ATOM 25 OP1 C A 244 84.587 139.722 -10.793 1.00 90.74 O
ATOM 26 OP2 C A 244 84.310 139.573 -8.241 1.00 92.28 O
ATOM 27 O5' C A 244 85.483 141.509 -9.282 1.00 90.70 O
TER
ATOM 1 O3' C B 240 80.273 138.717 3.739 1.00 63.21 O
ATOM 2 P U B 241 79.137 139.293 2.764 1.00 65.73 P
ATOM 3 OP1 U B 241 78.266 140.193 3.571 1.00 65.75 O
ATOM 4 OP2 U B 241 78.529 138.158 2.022 1.00 64.31 O
ATOM 5 O5' U B 241 79.960 140.172 1.718 1.00 67.50 O
ATOM 6 C5' U B 241 80.625 141.385 2.127 1.00 71.35 C
ATOM 7 C4' U B 241 81.301 142.043 0.943 1.00 73.88 C
ATOM 8 O4' U B 241 82.398 141.214 0.474 1.00 74.37 O
ATOM 9 C3' U B 241 80.447 142.232 -0.300 1.00 76.09 C
ATOM 10 O3' U B 241 79.566 143.346 -0.206 1.00 79.67 O
ATOM 11 C2' U B 241 81.502 142.400 -1.384 1.00 75.59 C
ATOM 12 O2' U B 241 82.078 143.693 -1.402 1.00 74.39 O
ATOM 13 C1' U B 241 82.555 141.384 -0.929 1.00 75.01 C
ATOM 14 N1 U B 241 82.412 140.078 -1.595 1.00 73.77 N
ATOM 15 C2 U B 241 83.121 139.875 -2.769 1.00 73.72 C
ATOM 16 O2 U B 241 83.866 140.712 -3.250 1.00 74.87 O
ATOM 17 N3 U B 241 82.924 138.653 -3.362 1.00 73.05 N
ATOM 18 C4 U B 241 82.109 137.637 -2.919 1.00 71.46 C
ATOM 19 O4 U B 241 82.023 136.602 -3.578 1.00 69.90 O
ATOM 20 C5 U B 241 81.427 137.912 -1.695 1.00 72.17 C
ATOM 21 C6 U B 241 81.597 139.092 -1.089 1.00 73.35 C
ATOM 22 P C B 242 78.025 143.170 -0.637 1.00 82.28 P
ATOM 23 OP1 C B 242 77.421 144.520 -0.780 1.00 82.27 O
ATOM 24 OP2 C B 242 77.409 142.188 0.293 1.00 82.36 O
ATOM 25 O5' C B 242 78.119 142.497 -2.078 1.00 82.12 O
TER
Atoms:
OP1: (79.410,138.828,-6.351)
OP2: (80.268,140.096,-4.282)
C3': (82.569,142.051,-8.513)
C1': (82.157,144.275,-7.825)
C5': (80.168,141.288,-7.958)
O4': (80.916,143.590,-7.870)
C8: (82.132,143.760,-5.325)
O2': (83.226,143.916,-9.946)
C6: (84.125,146.235,-3.822)
C5: (83.361,145.318,-4.564)
C4: (83.320,145.497,-5.935)
P: (79.643,140.113,-5.630)
C4': (81.075,142.333,-8.578)
C2': (83.173,143.446,-8.614)
C2: (84.622,147.265,-5.829)
N1: (84.753,147.219,-4.498)
N3: (83.938,146.461,-6.638)
N6: (84.266,146.182,-2.496)
N7: (82.608,144.215,-4.192)
N9: (82.518,144.491,-6.422)
O5': (80.509,141.080,-6.563)
O3': (82.987,141.220,-9.593)
OP2: (80.268,140.096,-4.282)
C3': (82.569,142.051,-8.513)
C1': (82.157,144.275,-7.825)
C5': (80.168,141.288,-7.958)
O4': (80.916,143.590,-7.870)
C8: (82.132,143.760,-5.325)
O2': (83.226,143.916,-9.946)
C6: (84.125,146.235,-3.822)
C5: (83.361,145.318,-4.564)
C4: (83.320,145.497,-5.935)
P: (79.643,140.113,-5.630)
C4': (81.075,142.333,-8.578)
C2': (83.173,143.446,-8.614)
C2: (84.622,147.265,-5.829)
N1: (84.753,147.219,-4.498)
N3: (83.938,146.461,-6.638)
N6: (84.266,146.182,-2.496)
N7: (82.608,144.215,-4.192)
N9: (82.518,144.491,-6.422)
O5': (80.509,141.080,-6.563)
O3': (82.987,141.220,-9.593)
C4: (82.109,137.637,-2.919)
N3: (82.924,138.653,-3.362)
OP1: (78.266,140.193,3.571)
OP2: (78.529,138.158,2.022)
C2: (83.121,139.875,-2.769)
C1': (82.555,141.384,-0.929)
C3': (80.447,142.232,-0.300)
O5': (79.960,140.172,1.718)
O4': (82.398,141.214,0.474)
C5': (80.625,141.385,2.127)
P: (79.137,139.293,2.764)
C4': (81.301,142.043,0.943)
C2': (81.502,142.400,-1.384)
O2': (82.078,143.693,-1.402)
N1: (82.412,140.078,-1.595)
O4: (82.023,136.602,-3.578)
O2: (83.866,140.712,-3.250)
C6: (81.597,139.092,-1.089)
C5: (81.427,137.912,-1.695)
O3': (79.566,143.346,-0.206)
N3: (82.924,138.653,-3.362)
OP1: (78.266,140.193,3.571)
OP2: (78.529,138.158,2.022)
C2: (83.121,139.875,-2.769)
C1': (82.555,141.384,-0.929)
C3': (80.447,142.232,-0.300)
O5': (79.960,140.172,1.718)
O4': (82.398,141.214,0.474)
C5': (80.625,141.385,2.127)
P: (79.137,139.293,2.764)
C4': (81.301,142.043,0.943)
C2': (81.502,142.400,-1.384)
O2': (82.078,143.693,-1.402)
N1: (82.412,140.078,-1.595)
O4: (82.023,136.602,-3.578)
O2: (83.866,140.712,-3.250)
C6: (81.597,139.092,-1.089)
C5: (81.427,137.912,-1.695)
O3': (79.566,143.346,-0.206)
Image (generated by PyMOL):