ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01879:01876

Extra

PDB:
ATOM 1 O3' C A1878 98.285 81.214 31.931 1.00 65.58 O
ATOM 2 P A A1879 98.647 81.410 33.482 1.00 66.70 P
ATOM 3 OP1 A A1879 99.633 82.520 33.530 1.00 66.92 O
ATOM 4 OP2 A A1879 99.019 80.090 34.042 1.00 69.72 O
ATOM 5 O5' A A1879 97.278 81.882 34.166 1.00 65.63 O
ATOM 6 C5' A A1879 96.856 83.261 34.086 1.00 64.59 C
ATOM 7 C4' A A1879 95.550 83.491 34.826 1.00 64.29 C
ATOM 8 O4' A A1879 94.446 82.824 34.163 1.00 64.39 O
ATOM 9 C3' A A1879 95.424 83.034 36.271 1.00 63.05 C
ATOM 10 O3' A A1879 96.086 83.932 37.155 1.00 62.19 O
ATOM 11 C2' A A1879 93.910 83.081 36.467 1.00 62.94 C
ATOM 12 O2' A A1879 93.404 84.386 36.670 1.00 62.48 O
ATOM 13 C1' A A1879 93.409 82.597 35.105 1.00 62.55 C
ATOM 14 N9 A A1879 93.056 81.179 35.100 1.00 62.77 N
ATOM 15 C8 A A1879 93.851 80.091 34.835 1.00 62.08 C
ATOM 16 N7 A A1879 93.221 78.944 34.919 1.00 61.34 N
ATOM 17 C5 A A1879 91.925 79.299 35.260 1.00 61.27 C
ATOM 18 C6 A A1879 90.767 78.541 35.496 1.00 61.33 C
ATOM 19 N6 A A1879 90.720 77.207 35.423 1.00 60.31 N
ATOM 20 N1 A A1879 89.639 79.207 35.821 1.00 62.61 N
ATOM 21 C2 A A1879 89.682 80.541 35.902 1.00 62.81 C
ATOM 22 N3 A A1879 90.705 81.364 35.701 1.00 62.39 N
ATOM 23 C4 A A1879 91.810 80.672 35.378 1.00 62.60 C
ATOM 24 P A A1880 96.521 83.443 38.622 1.00 63.18 P
ATOM 25 OP1 A A1880 97.312 84.542 39.229 1.00 64.71 O
ATOM 26 OP2 A A1880 97.115 82.090 38.520 1.00 63.97 O
ATOM 27 O5' A A1880 95.151 83.327 39.427 1.00 62.33 O
TER

ATOM 1 O3' G B1875 96.721 71.149 37.966 1.00 73.89 O
ATOM 2 P U B1876 96.529 70.941 36.388 1.00 72.92 P
ATOM 3 OP1 U B1876 95.541 69.858 36.161 1.00 74.51 O
ATOM 4 OP2 U B1876 97.886 70.831 35.799 1.00 73.37 O
ATOM 5 O5' U B1876 95.876 72.305 35.900 1.00 72.96 O
ATOM 6 C5' U B1876 94.528 72.641 36.258 1.00 71.74 C
ATOM 7 C4' U B1876 94.142 73.960 35.641 1.00 71.58 C
ATOM 8 O4' U B1876 94.985 75.008 36.180 1.00 70.68 O
ATOM 9 C3' U B1876 94.333 74.059 34.138 1.00 71.13 C
ATOM 10 O3' U B1876 93.212 73.501 33.452 1.00 73.50 O
ATOM 11 C2' U B1876 94.444 75.563 33.929 1.00 69.98 C
ATOM 12 O2' U B1876 93.178 76.184 33.925 1.00 67.97 O
ATOM 13 C1' U B1876 95.209 75.991 35.187 1.00 70.45 C
ATOM 14 N1 U B1876 96.662 76.162 35.020 1.00 71.38 N
ATOM 15 C2 U B1876 97.137 77.436 34.748 1.00 71.49 C
ATOM 16 O2 U B1876 96.409 78.407 34.639 1.00 70.27 O
ATOM 17 N3 U B1876 98.501 77.532 34.608 1.00 72.74 N
ATOM 18 C4 U B1876 99.425 76.511 34.715 1.00 74.27 C
ATOM 19 O4 U B1876 100.629 76.760 34.568 1.00 74.93 O
ATOM 20 C5 U B1876 98.859 75.225 34.997 1.00 73.81 C
ATOM 21 C6 U B1876 97.531 75.097 35.135 1.00 72.94 C
ATOM 22 P A B1877 93.435 72.656 32.101 1.00 75.36 P
ATOM 23 OP1 A B1877 92.094 72.393 31.520 1.00 74.45 O
ATOM 24 OP2 A B1877 94.340 71.516 32.400 1.00 75.89 O
ATOM 25 O5' A B1877 94.201 73.664 31.135 1.00 76.88 O
TER

Atoms:
OP1: (99.633,82.520,33.530)
OP2: (99.019,80.090,34.042)
C3': (95.424,83.034,36.271)
C1': (93.409,82.597,35.105)
C5': (96.856,83.261,34.086)
O4': (94.446,82.824,34.163)
C8: (93.851,80.091,34.835)
O2': (93.404,84.386,36.670)
C6: (90.767,78.541,35.496)
C5: (91.925,79.299,35.260)
C4: (91.810,80.672,35.378)
P: (98.647,81.410,33.482)
C4': (95.550,83.491,34.826)
C2': (93.910,83.081,36.467)
C2: (89.682,80.541,35.902)
N1: (89.639,79.207,35.821)
N3: (90.705,81.364,35.701)
N6: (90.720,77.207,35.423)
N7: (93.221,78.944,34.919)
N9: (93.056,81.179,35.100)
O5': (97.278,81.882,34.166)
O3': (96.086,83.932,37.155)
C4: (99.425,76.511,34.715)
N3: (98.501,77.532,34.608)
OP1: (95.541,69.858,36.161)
OP2: (97.886,70.831,35.799)
C2: (97.137,77.436,34.748)
C1': (95.209,75.991,35.187)
C3': (94.333,74.059,34.138)
O5': (95.876,72.305,35.900)
O4': (94.985,75.008,36.180)
C5': (94.528,72.641,36.258)
P: (96.529,70.941,36.388)
C4': (94.142,73.960,35.641)
C2': (94.444,75.563,33.929)
O2': (93.178,76.184,33.925)
N1: (96.662,76.162,35.020)
O4: (100.629,76.760,34.568)
O2: (96.409,78.407,34.639)
C6: (97.531,75.097,35.135)
C5: (98.859,75.225,34.997)
O3': (93.212,73.501,33.452)
Image (generated by PyMOL):
PyMOL image
show in jmol