Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.063 140.799 -5.456 1.00 91.76 O
ATOM 2 P A A 243 79.469 140.046 -5.663 1.00 93.15 P
ATOM 3 OP1 A A 243 79.205 138.798 -6.435 1.00 91.71 O
ATOM 4 OP2 A A 243 80.126 139.960 -4.334 1.00 93.52 O
ATOM 5 O5' A A 243 80.325 141.040 -6.577 1.00 93.66 O
ATOM 6 C5' A A 243 80.020 141.224 -7.985 1.00 93.39 C
ATOM 7 C4' A A 243 80.931 142.270 -8.598 1.00 92.51 C
ATOM 8 O4' A A 243 80.743 143.536 -7.913 1.00 92.38 O
ATOM 9 C3' A A 243 82.427 142.006 -8.500 1.00 92.76 C
ATOM 10 O3' A A 243 82.869 141.175 -9.569 1.00 93.63 O
ATOM 11 C2' A A 243 83.019 143.406 -8.605 1.00 92.37 C
ATOM 12 O2' A A 243 83.100 143.857 -9.941 1.00 92.75 O
ATOM 13 C1' A A 243 81.976 144.237 -7.853 1.00 92.08 C
ATOM 14 N9 A A 243 82.301 144.487 -6.447 1.00 92.03 N
ATOM 15 C8 A A 243 81.846 143.812 -5.340 1.00 92.32 C
ATOM 16 N7 A A 243 82.304 144.283 -4.207 1.00 92.05 N
ATOM 17 C5 A A 243 83.119 145.337 -4.589 1.00 91.74 C
ATOM 18 C6 A A 243 83.900 146.242 -3.852 1.00 91.90 C
ATOM 19 N6 A A 243 83.990 146.231 -2.521 1.00 91.54 N
ATOM 20 N1 A A 243 84.597 147.172 -4.537 1.00 91.99 N
ATOM 21 C2 A A 243 84.511 147.180 -5.872 1.00 92.29 C
ATOM 22 N3 A A 243 83.816 146.381 -6.678 1.00 92.58 N
ATOM 23 C4 A A 243 83.132 145.471 -5.966 1.00 92.34 C
ATOM 24 P C A 244 84.287 140.424 -9.468 1.00 95.15 P
ATOM 25 OP1 C A 244 84.553 139.791 -10.791 1.00 95.28 O
ATOM 26 OP2 C A 244 84.282 139.582 -8.242 1.00 96.61 O
ATOM 27 O5' C A 244 85.344 141.597 -9.248 1.00 94.52 O
TER
ATOM 1 O3' C B 240 80.276 138.724 3.736 1.00 68.80 O
ATOM 2 P U B 241 79.086 139.256 2.801 1.00 71.19 P
ATOM 3 OP1 U B 241 78.198 140.102 3.647 1.00 70.55 O
ATOM 4 OP2 U B 241 78.511 138.103 2.059 1.00 69.76 O
ATOM 5 O5' U B 241 79.834 140.185 1.744 1.00 72.99 O
ATOM 6 C5' U B 241 80.501 141.393 2.160 1.00 75.66 C
ATOM 7 C4' U B 241 81.186 142.052 0.982 1.00 77.63 C
ATOM 8 O4' U B 241 82.277 141.214 0.511 1.00 77.50 O
ATOM 9 C3' U B 241 80.338 142.257 -0.262 1.00 79.51 C
ATOM 10 O3' U B 241 79.462 143.376 -0.157 1.00 82.89 O
ATOM 11 C2' U B 241 81.402 142.427 -1.339 1.00 78.49 C
ATOM 12 O2' U B 241 81.999 143.710 -1.323 1.00 77.24 O
ATOM 13 C1' U B 241 82.440 141.394 -0.891 1.00 77.94 C
ATOM 14 N1 U B 241 82.300 140.093 -1.569 1.00 76.51 N
ATOM 15 C2 U B 241 83.030 139.891 -2.731 1.00 76.29 C
ATOM 16 O2 U B 241 83.780 140.728 -3.200 1.00 77.41 O
ATOM 17 N3 U B 241 82.848 138.669 -3.328 1.00 75.48 N
ATOM 18 C4 U B 241 82.027 137.652 -2.903 1.00 73.96 C
ATOM 19 O4 U B 241 81.959 136.614 -3.563 1.00 72.35 O
ATOM 20 C5 U B 241 81.316 137.929 -1.696 1.00 74.58 C
ATOM 21 C6 U B 241 81.473 139.108 -1.084 1.00 75.90 C
ATOM 22 P C B 242 77.921 143.216 -0.594 1.00 85.36 P
ATOM 23 OP1 C B 242 77.328 144.572 -0.714 1.00 85.56 O
ATOM 24 OP2 C B 242 77.300 142.223 0.322 1.00 85.11 O
ATOM 25 O5' C B 242 78.013 142.564 -2.046 1.00 85.86 O
TER
ATOM 2 P A A 243 79.469 140.046 -5.663 1.00 93.15 P
ATOM 3 OP1 A A 243 79.205 138.798 -6.435 1.00 91.71 O
ATOM 4 OP2 A A 243 80.126 139.960 -4.334 1.00 93.52 O
ATOM 5 O5' A A 243 80.325 141.040 -6.577 1.00 93.66 O
ATOM 6 C5' A A 243 80.020 141.224 -7.985 1.00 93.39 C
ATOM 7 C4' A A 243 80.931 142.270 -8.598 1.00 92.51 C
ATOM 8 O4' A A 243 80.743 143.536 -7.913 1.00 92.38 O
ATOM 9 C3' A A 243 82.427 142.006 -8.500 1.00 92.76 C
ATOM 10 O3' A A 243 82.869 141.175 -9.569 1.00 93.63 O
ATOM 11 C2' A A 243 83.019 143.406 -8.605 1.00 92.37 C
ATOM 12 O2' A A 243 83.100 143.857 -9.941 1.00 92.75 O
ATOM 13 C1' A A 243 81.976 144.237 -7.853 1.00 92.08 C
ATOM 14 N9 A A 243 82.301 144.487 -6.447 1.00 92.03 N
ATOM 15 C8 A A 243 81.846 143.812 -5.340 1.00 92.32 C
ATOM 16 N7 A A 243 82.304 144.283 -4.207 1.00 92.05 N
ATOM 17 C5 A A 243 83.119 145.337 -4.589 1.00 91.74 C
ATOM 18 C6 A A 243 83.900 146.242 -3.852 1.00 91.90 C
ATOM 19 N6 A A 243 83.990 146.231 -2.521 1.00 91.54 N
ATOM 20 N1 A A 243 84.597 147.172 -4.537 1.00 91.99 N
ATOM 21 C2 A A 243 84.511 147.180 -5.872 1.00 92.29 C
ATOM 22 N3 A A 243 83.816 146.381 -6.678 1.00 92.58 N
ATOM 23 C4 A A 243 83.132 145.471 -5.966 1.00 92.34 C
ATOM 24 P C A 244 84.287 140.424 -9.468 1.00 95.15 P
ATOM 25 OP1 C A 244 84.553 139.791 -10.791 1.00 95.28 O
ATOM 26 OP2 C A 244 84.282 139.582 -8.242 1.00 96.61 O
ATOM 27 O5' C A 244 85.344 141.597 -9.248 1.00 94.52 O
TER
ATOM 1 O3' C B 240 80.276 138.724 3.736 1.00 68.80 O
ATOM 2 P U B 241 79.086 139.256 2.801 1.00 71.19 P
ATOM 3 OP1 U B 241 78.198 140.102 3.647 1.00 70.55 O
ATOM 4 OP2 U B 241 78.511 138.103 2.059 1.00 69.76 O
ATOM 5 O5' U B 241 79.834 140.185 1.744 1.00 72.99 O
ATOM 6 C5' U B 241 80.501 141.393 2.160 1.00 75.66 C
ATOM 7 C4' U B 241 81.186 142.052 0.982 1.00 77.63 C
ATOM 8 O4' U B 241 82.277 141.214 0.511 1.00 77.50 O
ATOM 9 C3' U B 241 80.338 142.257 -0.262 1.00 79.51 C
ATOM 10 O3' U B 241 79.462 143.376 -0.157 1.00 82.89 O
ATOM 11 C2' U B 241 81.402 142.427 -1.339 1.00 78.49 C
ATOM 12 O2' U B 241 81.999 143.710 -1.323 1.00 77.24 O
ATOM 13 C1' U B 241 82.440 141.394 -0.891 1.00 77.94 C
ATOM 14 N1 U B 241 82.300 140.093 -1.569 1.00 76.51 N
ATOM 15 C2 U B 241 83.030 139.891 -2.731 1.00 76.29 C
ATOM 16 O2 U B 241 83.780 140.728 -3.200 1.00 77.41 O
ATOM 17 N3 U B 241 82.848 138.669 -3.328 1.00 75.48 N
ATOM 18 C4 U B 241 82.027 137.652 -2.903 1.00 73.96 C
ATOM 19 O4 U B 241 81.959 136.614 -3.563 1.00 72.35 O
ATOM 20 C5 U B 241 81.316 137.929 -1.696 1.00 74.58 C
ATOM 21 C6 U B 241 81.473 139.108 -1.084 1.00 75.90 C
ATOM 22 P C B 242 77.921 143.216 -0.594 1.00 85.36 P
ATOM 23 OP1 C B 242 77.328 144.572 -0.714 1.00 85.56 O
ATOM 24 OP2 C B 242 77.300 142.223 0.322 1.00 85.11 O
ATOM 25 O5' C B 242 78.013 142.564 -2.046 1.00 85.86 O
TER
Atoms:
OP1: (79.205,138.798,-6.435)
OP2: (80.126,139.960,-4.334)
C3': (82.427,142.006,-8.500)
C1': (81.976,144.237,-7.853)
C5': (80.020,141.224,-7.985)
O4': (80.743,143.536,-7.913)
C8: (81.846,143.812,-5.340)
O2': (83.100,143.857,-9.941)
C6: (83.900,146.242,-3.852)
C5: (83.119,145.337,-4.589)
C4: (83.132,145.471,-5.966)
P: (79.469,140.046,-5.663)
C4': (80.931,142.270,-8.598)
C2': (83.019,143.406,-8.605)
C2: (84.511,147.180,-5.872)
N1: (84.597,147.172,-4.537)
N3: (83.816,146.381,-6.678)
N6: (83.990,146.231,-2.521)
N7: (82.304,144.283,-4.207)
N9: (82.301,144.487,-6.447)
O5': (80.325,141.040,-6.577)
O3': (82.869,141.175,-9.569)
OP2: (80.126,139.960,-4.334)
C3': (82.427,142.006,-8.500)
C1': (81.976,144.237,-7.853)
C5': (80.020,141.224,-7.985)
O4': (80.743,143.536,-7.913)
C8: (81.846,143.812,-5.340)
O2': (83.100,143.857,-9.941)
C6: (83.900,146.242,-3.852)
C5: (83.119,145.337,-4.589)
C4: (83.132,145.471,-5.966)
P: (79.469,140.046,-5.663)
C4': (80.931,142.270,-8.598)
C2': (83.019,143.406,-8.605)
C2: (84.511,147.180,-5.872)
N1: (84.597,147.172,-4.537)
N3: (83.816,146.381,-6.678)
N6: (83.990,146.231,-2.521)
N7: (82.304,144.283,-4.207)
N9: (82.301,144.487,-6.447)
O5': (80.325,141.040,-6.577)
O3': (82.869,141.175,-9.569)
C4: (82.027,137.652,-2.903)
N3: (82.848,138.669,-3.328)
OP1: (78.198,140.102,3.647)
OP2: (78.511,138.103,2.059)
C2: (83.030,139.891,-2.731)
C1': (82.440,141.394,-0.891)
C3': (80.338,142.257,-0.262)
O5': (79.834,140.185,1.744)
O4': (82.277,141.214,0.511)
C5': (80.501,141.393,2.160)
P: (79.086,139.256,2.801)
C4': (81.186,142.052,0.982)
C2': (81.402,142.427,-1.339)
O2': (81.999,143.710,-1.323)
N1: (82.300,140.093,-1.569)
O4: (81.959,136.614,-3.563)
O2: (83.780,140.728,-3.200)
C6: (81.473,139.108,-1.084)
C5: (81.316,137.929,-1.696)
O3': (79.462,143.376,-0.157)
N3: (82.848,138.669,-3.328)
OP1: (78.198,140.102,3.647)
OP2: (78.511,138.103,2.059)
C2: (83.030,139.891,-2.731)
C1': (82.440,141.394,-0.891)
C3': (80.338,142.257,-0.262)
O5': (79.834,140.185,1.744)
O4': (82.277,141.214,0.511)
C5': (80.501,141.393,2.160)
P: (79.086,139.256,2.801)
C4': (81.186,142.052,0.982)
C2': (81.402,142.427,-1.339)
O2': (81.999,143.710,-1.323)
N1: (82.300,140.093,-1.569)
O4: (81.959,136.614,-3.563)
O2: (83.780,140.728,-3.200)
C6: (81.473,139.108,-1.084)
C5: (81.316,137.929,-1.696)
O3': (79.462,143.376,-0.157)
Image (generated by PyMOL):