Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.209 140.986 -5.521 1.00 89.44 O
ATOM 2 P A A 243 79.612 140.214 -5.652 1.00 90.62 P
ATOM 3 OP1 A A 243 79.355 138.925 -6.350 1.00 89.36 O
ATOM 4 OP2 A A 243 80.241 140.208 -4.307 1.00 91.17 O
ATOM 5 O5' A A 243 80.492 141.149 -6.604 1.00 91.54 O
ATOM 6 C5' A A 243 80.182 141.303 -8.014 1.00 91.11 C
ATOM 7 C4' A A 243 81.082 142.348 -8.646 1.00 90.53 C
ATOM 8 O4' A A 243 80.887 143.615 -7.967 1.00 90.71 O
ATOM 9 C3' A A 243 82.580 142.093 -8.549 1.00 90.96 C
ATOM 10 O3' A A 243 83.036 141.251 -9.605 1.00 91.98 O
ATOM 11 C2' A A 243 83.162 143.497 -8.654 1.00 90.79 C
ATOM 12 O2' A A 243 83.238 143.963 -9.985 1.00 91.24 O
ATOM 13 C1' A A 243 82.119 144.315 -7.891 1.00 90.69 C
ATOM 14 N9 A A 243 82.450 144.515 -6.479 1.00 91.03 N
ATOM 15 C8 A A 243 82.035 143.777 -5.398 1.00 91.07 C
ATOM 16 N7 A A 243 82.497 144.212 -4.251 1.00 91.07 N
ATOM 17 C5 A A 243 83.269 145.310 -4.599 1.00 90.76 C
ATOM 18 C6 A A 243 84.032 146.205 -3.835 1.00 90.80 C
ATOM 19 N6 A A 243 84.148 146.133 -2.510 1.00 91.29 N
ATOM 20 N1 A A 243 84.686 147.187 -4.488 1.00 91.12 N
ATOM 21 C2 A A 243 84.577 147.253 -5.819 1.00 91.08 C
ATOM 22 N3 A A 243 83.896 146.469 -6.649 1.00 91.21 N
ATOM 23 C4 A A 243 83.254 145.505 -5.968 1.00 91.28 C
ATOM 24 P C A 244 84.454 140.501 -9.478 1.00 93.44 P
ATOM 25 OP1 C A 244 84.755 139.876 -10.796 1.00 93.04 O
ATOM 26 OP2 C A 244 84.430 139.655 -8.253 1.00 94.30 O
ATOM 27 O5' C A 244 85.502 141.678 -9.242 1.00 93.11 O
TER
ATOM 1 O3' C B 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 2 P U B 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 3 OP1 U B 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 4 OP2 U B 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 5 O5' U B 241 80.009 140.304 1.733 1.00 74.07 O
ATOM 6 C5' U B 241 80.593 141.556 2.144 1.00 76.68 C
ATOM 7 C4' U B 241 81.259 142.240 0.970 1.00 78.69 C
ATOM 8 O4' U B 241 82.388 141.446 0.516 1.00 78.81 O
ATOM 9 C3' U B 241 80.419 142.409 -0.286 1.00 80.48 C
ATOM 10 O3' U B 241 79.510 143.503 -0.204 1.00 82.82 O
ATOM 11 C2' U B 241 81.489 142.615 -1.348 1.00 80.16 C
ATOM 12 O2' U B 241 82.036 143.922 -1.321 1.00 79.23 O
ATOM 13 C1' U B 241 82.555 141.617 -0.885 1.00 79.52 C
ATOM 14 N1 U B 241 82.439 140.305 -1.545 1.00 78.39 N
ATOM 15 C2 U B 241 83.182 140.094 -2.696 1.00 78.33 C
ATOM 16 O2 U B 241 83.936 140.931 -3.166 1.00 77.97 O
ATOM 17 N3 U B 241 83.008 138.863 -3.283 1.00 77.72 N
ATOM 18 C4 U B 241 82.186 137.845 -2.851 1.00 75.90 C
ATOM 19 O4 U B 241 82.125 136.802 -3.501 1.00 74.18 O
ATOM 20 C5 U B 241 81.468 138.130 -1.650 1.00 76.57 C
ATOM 21 C6 U B 241 81.616 139.317 -1.050 1.00 78.03 C
ATOM 22 P C B 242 77.980 143.294 -0.656 1.00 85.08 P
ATOM 23 OP1 C B 242 77.339 144.630 -0.792 1.00 84.65 O
ATOM 24 OP2 C B 242 77.383 142.286 0.258 1.00 84.42 O
ATOM 25 O5' C B 242 78.093 142.643 -2.106 1.00 85.17 O
TER
ATOM 2 P A A 243 79.612 140.214 -5.652 1.00 90.62 P
ATOM 3 OP1 A A 243 79.355 138.925 -6.350 1.00 89.36 O
ATOM 4 OP2 A A 243 80.241 140.208 -4.307 1.00 91.17 O
ATOM 5 O5' A A 243 80.492 141.149 -6.604 1.00 91.54 O
ATOM 6 C5' A A 243 80.182 141.303 -8.014 1.00 91.11 C
ATOM 7 C4' A A 243 81.082 142.348 -8.646 1.00 90.53 C
ATOM 8 O4' A A 243 80.887 143.615 -7.967 1.00 90.71 O
ATOM 9 C3' A A 243 82.580 142.093 -8.549 1.00 90.96 C
ATOM 10 O3' A A 243 83.036 141.251 -9.605 1.00 91.98 O
ATOM 11 C2' A A 243 83.162 143.497 -8.654 1.00 90.79 C
ATOM 12 O2' A A 243 83.238 143.963 -9.985 1.00 91.24 O
ATOM 13 C1' A A 243 82.119 144.315 -7.891 1.00 90.69 C
ATOM 14 N9 A A 243 82.450 144.515 -6.479 1.00 91.03 N
ATOM 15 C8 A A 243 82.035 143.777 -5.398 1.00 91.07 C
ATOM 16 N7 A A 243 82.497 144.212 -4.251 1.00 91.07 N
ATOM 17 C5 A A 243 83.269 145.310 -4.599 1.00 90.76 C
ATOM 18 C6 A A 243 84.032 146.205 -3.835 1.00 90.80 C
ATOM 19 N6 A A 243 84.148 146.133 -2.510 1.00 91.29 N
ATOM 20 N1 A A 243 84.686 147.187 -4.488 1.00 91.12 N
ATOM 21 C2 A A 243 84.577 147.253 -5.819 1.00 91.08 C
ATOM 22 N3 A A 243 83.896 146.469 -6.649 1.00 91.21 N
ATOM 23 C4 A A 243 83.254 145.505 -5.968 1.00 91.28 C
ATOM 24 P C A 244 84.454 140.501 -9.478 1.00 93.44 P
ATOM 25 OP1 C A 244 84.755 139.876 -10.796 1.00 93.04 O
ATOM 26 OP2 C A 244 84.430 139.655 -8.253 1.00 94.30 O
ATOM 27 O5' C A 244 85.502 141.678 -9.242 1.00 93.11 O
TER
ATOM 1 O3' C B 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 2 P U B 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 3 OP1 U B 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 4 OP2 U B 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 5 O5' U B 241 80.009 140.304 1.733 1.00 74.07 O
ATOM 6 C5' U B 241 80.593 141.556 2.144 1.00 76.68 C
ATOM 7 C4' U B 241 81.259 142.240 0.970 1.00 78.69 C
ATOM 8 O4' U B 241 82.388 141.446 0.516 1.00 78.81 O
ATOM 9 C3' U B 241 80.419 142.409 -0.286 1.00 80.48 C
ATOM 10 O3' U B 241 79.510 143.503 -0.204 1.00 82.82 O
ATOM 11 C2' U B 241 81.489 142.615 -1.348 1.00 80.16 C
ATOM 12 O2' U B 241 82.036 143.922 -1.321 1.00 79.23 O
ATOM 13 C1' U B 241 82.555 141.617 -0.885 1.00 79.52 C
ATOM 14 N1 U B 241 82.439 140.305 -1.545 1.00 78.39 N
ATOM 15 C2 U B 241 83.182 140.094 -2.696 1.00 78.33 C
ATOM 16 O2 U B 241 83.936 140.931 -3.166 1.00 77.97 O
ATOM 17 N3 U B 241 83.008 138.863 -3.283 1.00 77.72 N
ATOM 18 C4 U B 241 82.186 137.845 -2.851 1.00 75.90 C
ATOM 19 O4 U B 241 82.125 136.802 -3.501 1.00 74.18 O
ATOM 20 C5 U B 241 81.468 138.130 -1.650 1.00 76.57 C
ATOM 21 C6 U B 241 81.616 139.317 -1.050 1.00 78.03 C
ATOM 22 P C B 242 77.980 143.294 -0.656 1.00 85.08 P
ATOM 23 OP1 C B 242 77.339 144.630 -0.792 1.00 84.65 O
ATOM 24 OP2 C B 242 77.383 142.286 0.258 1.00 84.42 O
ATOM 25 O5' C B 242 78.093 142.643 -2.106 1.00 85.17 O
TER
Atoms:
OP1: (79.355,138.925,-6.350)
OP2: (80.241,140.208,-4.307)
C3': (82.580,142.093,-8.549)
C1': (82.119,144.315,-7.891)
C5': (80.182,141.303,-8.014)
O4': (80.887,143.615,-7.967)
C8: (82.035,143.777,-5.398)
O2': (83.238,143.963,-9.985)
C6: (84.032,146.205,-3.835)
C5: (83.269,145.310,-4.599)
C4: (83.254,145.505,-5.968)
P: (79.612,140.214,-5.652)
C4': (81.082,142.348,-8.646)
C2': (83.162,143.497,-8.654)
C2: (84.577,147.253,-5.819)
N1: (84.686,147.187,-4.488)
N3: (83.896,146.469,-6.649)
N6: (84.148,146.133,-2.510)
N7: (82.497,144.212,-4.251)
N9: (82.450,144.515,-6.479)
O5': (80.492,141.149,-6.604)
O3': (83.036,141.251,-9.605)
OP2: (80.241,140.208,-4.307)
C3': (82.580,142.093,-8.549)
C1': (82.119,144.315,-7.891)
C5': (80.182,141.303,-8.014)
O4': (80.887,143.615,-7.967)
C8: (82.035,143.777,-5.398)
O2': (83.238,143.963,-9.985)
C6: (84.032,146.205,-3.835)
C5: (83.269,145.310,-4.599)
C4: (83.254,145.505,-5.968)
P: (79.612,140.214,-5.652)
C4': (81.082,142.348,-8.646)
C2': (83.162,143.497,-8.654)
C2: (84.577,147.253,-5.819)
N1: (84.686,147.187,-4.488)
N3: (83.896,146.469,-6.649)
N6: (84.148,146.133,-2.510)
N7: (82.497,144.212,-4.251)
N9: (82.450,144.515,-6.479)
O5': (80.492,141.149,-6.604)
O3': (83.036,141.251,-9.605)
C4: (82.186,137.845,-2.851)
N3: (83.008,138.863,-3.283)
OP1: (78.306,140.255,3.567)
OP2: (78.663,138.231,2.022)
C2: (83.182,140.094,-2.696)
C1': (82.555,141.617,-0.885)
C3': (80.419,142.409,-0.286)
O5': (80.009,140.304,1.733)
O4': (82.388,141.446,0.516)
C5': (80.593,141.556,2.144)
P: (79.219,139.389,2.772)
C4': (81.259,142.240,0.970)
C2': (81.489,142.615,-1.348)
O2': (82.036,143.922,-1.321)
N1: (82.439,140.305,-1.545)
O4: (82.125,136.802,-3.501)
O2: (83.936,140.931,-3.166)
C6: (81.616,139.317,-1.050)
C5: (81.468,138.130,-1.650)
O3': (79.510,143.503,-0.204)
N3: (83.008,138.863,-3.283)
OP1: (78.306,140.255,3.567)
OP2: (78.663,138.231,2.022)
C2: (83.182,140.094,-2.696)
C1': (82.555,141.617,-0.885)
C3': (80.419,142.409,-0.286)
O5': (80.009,140.304,1.733)
O4': (82.388,141.446,0.516)
C5': (80.593,141.556,2.144)
P: (79.219,139.389,2.772)
C4': (81.259,142.240,0.970)
C2': (81.489,142.615,-1.348)
O2': (82.036,143.922,-1.321)
N1: (82.439,140.305,-1.545)
O4: (82.125,136.802,-3.501)
O2: (83.936,140.931,-3.166)
C6: (81.616,139.317,-1.050)
C5: (81.468,138.130,-1.650)
O3': (79.510,143.503,-0.204)
Image (generated by PyMOL):