Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0243:0241
Extra
PDB:
ATOM 1 O3' C A 242 78.262 140.770 -5.423 1.00 84.45 O
ATOM 2 P A A 243 79.674 140.012 -5.525 1.00 85.43 P
ATOM 3 OP1 A A 243 79.435 138.705 -6.201 1.00 84.71 O
ATOM 4 OP2 A A 243 80.292 140.038 -4.173 1.00 85.54 O
ATOM 5 O5' A A 243 80.551 140.938 -6.487 1.00 85.87 O
ATOM 6 C5' A A 243 80.194 141.131 -7.879 1.00 85.53 C
ATOM 7 C4' A A 243 81.063 142.204 -8.505 1.00 85.12 C
ATOM 8 O4' A A 243 80.868 143.455 -7.793 1.00 85.21 O
ATOM 9 C3' A A 243 82.565 141.972 -8.442 1.00 85.31 C
ATOM 10 O3' A A 243 83.018 141.142 -9.507 1.00 85.31 O
ATOM 11 C2' A A 243 83.118 143.385 -8.557 1.00 85.62 C
ATOM 12 O2' A A 243 83.124 143.857 -9.889 1.00 86.27 O
ATOM 13 C1' A A 243 82.089 144.176 -7.748 1.00 85.55 C
ATOM 14 N9 A A 243 82.468 144.364 -6.345 1.00 86.18 N
ATOM 15 C8 A A 243 82.090 143.619 -5.254 1.00 86.43 C
ATOM 16 N7 A A 243 82.594 144.047 -4.122 1.00 86.24 N
ATOM 17 C5 A A 243 83.356 145.145 -4.489 1.00 85.83 C
ATOM 18 C6 A A 243 84.148 146.036 -3.746 1.00 85.97 C
ATOM 19 N6 A A 243 84.312 145.958 -2.425 1.00 85.43 N
ATOM 20 N1 A A 243 84.778 147.023 -4.417 1.00 86.09 N
ATOM 21 C2 A A 243 84.622 147.096 -5.743 1.00 86.17 C
ATOM 22 N3 A A 243 83.910 146.317 -6.553 1.00 86.40 N
ATOM 23 C4 A A 243 83.292 145.350 -5.855 1.00 86.25 C
ATOM 24 P C A 244 84.396 140.326 -9.354 1.00 85.99 P
ATOM 25 OP1 C A 244 84.658 139.640 -10.649 1.00 85.38 O
ATOM 26 OP2 C A 244 84.325 139.525 -8.101 1.00 86.18 O
ATOM 27 O5' C A 244 85.501 141.458 -9.144 1.00 84.98 O
TER
ATOM 1 O3' C B 240 80.337 138.563 3.841 1.00 61.41 O
ATOM 2 P U B 241 79.174 139.138 2.895 1.00 63.99 P
ATOM 3 OP1 U B 241 78.333 140.048 3.719 1.00 63.54 O
ATOM 4 OP2 U B 241 78.538 137.997 2.180 1.00 62.15 O
ATOM 5 O5' U B 241 79.965 140.017 1.828 1.00 66.03 O
ATOM 6 C5' U B 241 80.632 141.234 2.224 1.00 70.37 C
ATOM 7 C4' U B 241 81.292 141.892 1.033 1.00 72.94 C
ATOM 8 O4' U B 241 82.399 141.075 0.564 1.00 73.20 O
ATOM 9 C3' U B 241 80.429 142.070 -0.206 1.00 75.16 C
ATOM 10 O3' U B 241 79.546 143.185 -0.102 1.00 78.48 O
ATOM 11 C2' U B 241 81.482 142.246 -1.293 1.00 75.08 C
ATOM 12 O2' U B 241 82.042 143.545 -1.303 1.00 75.01 O
ATOM 13 C1' U B 241 82.549 141.242 -0.840 1.00 74.26 C
ATOM 14 N1 U B 241 82.426 139.931 -1.501 1.00 73.25 N
ATOM 15 C2 U B 241 83.183 139.713 -2.644 1.00 73.07 C
ATOM 16 O2 U B 241 83.961 140.537 -3.094 1.00 73.44 O
ATOM 17 N3 U B 241 82.993 138.492 -3.242 1.00 72.57 N
ATOM 18 C4 U B 241 82.136 137.494 -2.838 1.00 71.09 C
ATOM 19 O4 U B 241 82.049 136.466 -3.508 1.00 69.71 O
ATOM 20 C5 U B 241 81.412 137.779 -1.640 1.00 71.56 C
ATOM 21 C6 U B 241 81.579 138.956 -1.025 1.00 73.17 C
ATOM 22 P C B 242 78.008 143.023 -0.551 1.00 80.98 P
ATOM 23 OP1 C B 242 77.401 144.377 -0.640 1.00 80.63 O
ATOM 24 OP2 C B 242 77.387 141.999 0.331 1.00 80.63 O
ATOM 25 O5' C B 242 78.108 142.417 -2.021 1.00 81.12 O
TER
ATOM 2 P A A 243 79.674 140.012 -5.525 1.00 85.43 P
ATOM 3 OP1 A A 243 79.435 138.705 -6.201 1.00 84.71 O
ATOM 4 OP2 A A 243 80.292 140.038 -4.173 1.00 85.54 O
ATOM 5 O5' A A 243 80.551 140.938 -6.487 1.00 85.87 O
ATOM 6 C5' A A 243 80.194 141.131 -7.879 1.00 85.53 C
ATOM 7 C4' A A 243 81.063 142.204 -8.505 1.00 85.12 C
ATOM 8 O4' A A 243 80.868 143.455 -7.793 1.00 85.21 O
ATOM 9 C3' A A 243 82.565 141.972 -8.442 1.00 85.31 C
ATOM 10 O3' A A 243 83.018 141.142 -9.507 1.00 85.31 O
ATOM 11 C2' A A 243 83.118 143.385 -8.557 1.00 85.62 C
ATOM 12 O2' A A 243 83.124 143.857 -9.889 1.00 86.27 O
ATOM 13 C1' A A 243 82.089 144.176 -7.748 1.00 85.55 C
ATOM 14 N9 A A 243 82.468 144.364 -6.345 1.00 86.18 N
ATOM 15 C8 A A 243 82.090 143.619 -5.254 1.00 86.43 C
ATOM 16 N7 A A 243 82.594 144.047 -4.122 1.00 86.24 N
ATOM 17 C5 A A 243 83.356 145.145 -4.489 1.00 85.83 C
ATOM 18 C6 A A 243 84.148 146.036 -3.746 1.00 85.97 C
ATOM 19 N6 A A 243 84.312 145.958 -2.425 1.00 85.43 N
ATOM 20 N1 A A 243 84.778 147.023 -4.417 1.00 86.09 N
ATOM 21 C2 A A 243 84.622 147.096 -5.743 1.00 86.17 C
ATOM 22 N3 A A 243 83.910 146.317 -6.553 1.00 86.40 N
ATOM 23 C4 A A 243 83.292 145.350 -5.855 1.00 86.25 C
ATOM 24 P C A 244 84.396 140.326 -9.354 1.00 85.99 P
ATOM 25 OP1 C A 244 84.658 139.640 -10.649 1.00 85.38 O
ATOM 26 OP2 C A 244 84.325 139.525 -8.101 1.00 86.18 O
ATOM 27 O5' C A 244 85.501 141.458 -9.144 1.00 84.98 O
TER
ATOM 1 O3' C B 240 80.337 138.563 3.841 1.00 61.41 O
ATOM 2 P U B 241 79.174 139.138 2.895 1.00 63.99 P
ATOM 3 OP1 U B 241 78.333 140.048 3.719 1.00 63.54 O
ATOM 4 OP2 U B 241 78.538 137.997 2.180 1.00 62.15 O
ATOM 5 O5' U B 241 79.965 140.017 1.828 1.00 66.03 O
ATOM 6 C5' U B 241 80.632 141.234 2.224 1.00 70.37 C
ATOM 7 C4' U B 241 81.292 141.892 1.033 1.00 72.94 C
ATOM 8 O4' U B 241 82.399 141.075 0.564 1.00 73.20 O
ATOM 9 C3' U B 241 80.429 142.070 -0.206 1.00 75.16 C
ATOM 10 O3' U B 241 79.546 143.185 -0.102 1.00 78.48 O
ATOM 11 C2' U B 241 81.482 142.246 -1.293 1.00 75.08 C
ATOM 12 O2' U B 241 82.042 143.545 -1.303 1.00 75.01 O
ATOM 13 C1' U B 241 82.549 141.242 -0.840 1.00 74.26 C
ATOM 14 N1 U B 241 82.426 139.931 -1.501 1.00 73.25 N
ATOM 15 C2 U B 241 83.183 139.713 -2.644 1.00 73.07 C
ATOM 16 O2 U B 241 83.961 140.537 -3.094 1.00 73.44 O
ATOM 17 N3 U B 241 82.993 138.492 -3.242 1.00 72.57 N
ATOM 18 C4 U B 241 82.136 137.494 -2.838 1.00 71.09 C
ATOM 19 O4 U B 241 82.049 136.466 -3.508 1.00 69.71 O
ATOM 20 C5 U B 241 81.412 137.779 -1.640 1.00 71.56 C
ATOM 21 C6 U B 241 81.579 138.956 -1.025 1.00 73.17 C
ATOM 22 P C B 242 78.008 143.023 -0.551 1.00 80.98 P
ATOM 23 OP1 C B 242 77.401 144.377 -0.640 1.00 80.63 O
ATOM 24 OP2 C B 242 77.387 141.999 0.331 1.00 80.63 O
ATOM 25 O5' C B 242 78.108 142.417 -2.021 1.00 81.12 O
TER
Atoms:
OP1: (79.435,138.705,-6.201)
OP2: (80.292,140.038,-4.173)
C3': (82.565,141.972,-8.442)
C1': (82.089,144.176,-7.748)
C5': (80.194,141.131,-7.879)
O4': (80.868,143.455,-7.793)
C8: (82.090,143.619,-5.254)
O2': (83.124,143.857,-9.889)
C6: (84.148,146.036,-3.746)
C5: (83.356,145.145,-4.489)
C4: (83.292,145.350,-5.855)
P: (79.674,140.012,-5.525)
C4': (81.063,142.204,-8.505)
C2': (83.118,143.385,-8.557)
C2: (84.622,147.096,-5.743)
N1: (84.778,147.023,-4.417)
N3: (83.910,146.317,-6.553)
N6: (84.312,145.958,-2.425)
N7: (82.594,144.047,-4.122)
N9: (82.468,144.364,-6.345)
O5': (80.551,140.938,-6.487)
O3': (83.018,141.142,-9.507)
OP2: (80.292,140.038,-4.173)
C3': (82.565,141.972,-8.442)
C1': (82.089,144.176,-7.748)
C5': (80.194,141.131,-7.879)
O4': (80.868,143.455,-7.793)
C8: (82.090,143.619,-5.254)
O2': (83.124,143.857,-9.889)
C6: (84.148,146.036,-3.746)
C5: (83.356,145.145,-4.489)
C4: (83.292,145.350,-5.855)
P: (79.674,140.012,-5.525)
C4': (81.063,142.204,-8.505)
C2': (83.118,143.385,-8.557)
C2: (84.622,147.096,-5.743)
N1: (84.778,147.023,-4.417)
N3: (83.910,146.317,-6.553)
N6: (84.312,145.958,-2.425)
N7: (82.594,144.047,-4.122)
N9: (82.468,144.364,-6.345)
O5': (80.551,140.938,-6.487)
O3': (83.018,141.142,-9.507)
C4: (82.136,137.494,-2.838)
N3: (82.993,138.492,-3.242)
OP1: (78.333,140.048,3.719)
OP2: (78.538,137.997,2.180)
C2: (83.183,139.713,-2.644)
C1': (82.549,141.242,-0.840)
C3': (80.429,142.070,-0.206)
O5': (79.965,140.017,1.828)
O4': (82.399,141.075,0.564)
C5': (80.632,141.234,2.224)
P: (79.174,139.138,2.895)
C4': (81.292,141.892,1.033)
C2': (81.482,142.246,-1.293)
O2': (82.042,143.545,-1.303)
N1: (82.426,139.931,-1.501)
O4: (82.049,136.466,-3.508)
O2: (83.961,140.537,-3.094)
C6: (81.579,138.956,-1.025)
C5: (81.412,137.779,-1.640)
O3': (79.546,143.185,-0.102)
N3: (82.993,138.492,-3.242)
OP1: (78.333,140.048,3.719)
OP2: (78.538,137.997,2.180)
C2: (83.183,139.713,-2.644)
C1': (82.549,141.242,-0.840)
C3': (80.429,142.070,-0.206)
O5': (79.965,140.017,1.828)
O4': (82.399,141.075,0.564)
C5': (80.632,141.234,2.224)
P: (79.174,139.138,2.895)
C4': (81.292,141.892,1.033)
C2': (81.482,142.246,-1.293)
O2': (82.042,143.545,-1.303)
N1: (82.426,139.931,-1.501)
O4: (82.049,136.466,-3.508)
O2: (83.961,140.537,-3.094)
C6: (81.579,138.956,-1.025)
C5: (81.412,137.779,-1.640)
O3': (79.546,143.185,-0.102)
Image (generated by PyMOL):