ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2605:2608

Extra

PDB:
ATOM 1 O3' A A 604 -77.612 22.537 71.606 1.00 83.69 O
ATOM 2 P A A 605 -77.170 21.393 72.645 1.00 84.47 P
ATOM 3 OP1 A A 605 -76.876 20.171 71.857 1.00 84.53 O
ATOM 4 OP2 A A 605 -78.229 21.333 73.698 1.00 85.11 O
ATOM 5 O5' A A 605 -75.820 21.978 73.265 1.00 83.36 O
ATOM 6 C5' A A 605 -75.381 21.560 74.549 1.00 82.94 C
ATOM 7 C4' A A 605 -74.214 22.379 75.064 1.00 82.00 C
ATOM 8 O4' A A 605 -72.952 21.835 74.573 1.00 81.26 O
ATOM 9 C3' A A 605 -74.203 23.868 74.693 1.00 81.88 C
ATOM 10 O3' A A 605 -73.746 24.611 75.818 1.00 81.41 O
ATOM 11 C2' A A 605 -73.133 23.931 73.606 1.00 81.28 C
ATOM 12 O2' A A 605 -72.534 25.196 73.449 1.00 80.82 O
ATOM 13 C1' A A 605 -72.147 22.916 74.151 1.00 80.67 C
ATOM 14 N9 A A 605 -71.145 22.438 73.195 1.00 80.19 N
ATOM 15 C8 A A 605 -69.768 22.555 73.299 1.00 79.31 C
ATOM 16 N7 A A 605 -69.116 22.022 72.295 1.00 79.11 N
ATOM 17 C5 A A 605 -70.131 21.530 71.494 1.00 79.91 C
ATOM 18 C6 A A 605 -70.116 20.859 70.285 1.00 80.20 C
ATOM 19 N6 A A 605 -69.000 20.545 69.645 1.00 79.68 N
ATOM 20 N1 A A 605 -71.311 20.517 69.754 1.00 81.09 N
ATOM 21 C2 A A 605 -72.442 20.817 70.390 1.00 81.66 C
ATOM 22 N3 A A 605 -72.588 21.450 71.537 1.00 81.48 N
ATOM 23 C4 A A 605 -71.385 21.779 72.026 1.00 80.59 C
ATOM 24 P G A 606 -74.791 25.232 76.853 1.00 68.57 P
ATOM 25 OP1 G A 606 -76.143 24.866 76.374 1.00 69.58 O
ATOM 26 OP2 G A 606 -74.447 26.671 77.012 1.00 68.25 O
ATOM 27 O5' G A 606 -74.489 24.438 78.205 1.00 68.35 O
TER

ATOM 1 O3' U B 607 -68.692 22.526 77.996 1.00 66.97 O
ATOM 2 P U B 608 -68.748 23.961 77.244 1.00 65.35 P
ATOM 3 OP1 U B 608 -70.167 24.239 76.874 1.00 66.21 O
ATOM 4 OP2 U B 608 -67.711 23.941 76.159 1.00 64.81 O
ATOM 5 O5' U B 608 -68.302 24.967 78.395 1.00 64.94 O
ATOM 6 C5' U B 608 -68.882 24.935 79.701 1.00 65.26 C
ATOM 7 C4' U B 608 -68.181 25.915 80.613 1.00 64.76 C
ATOM 8 O4' U B 608 -67.060 25.246 81.273 1.00 64.17 O
ATOM 9 C3' U B 608 -67.570 27.100 79.890 1.00 64.34 C
ATOM 10 O3' U B 608 -67.402 28.183 80.794 1.00 64.19 O
ATOM 11 C2' U B 608 -66.185 26.572 79.555 1.00 63.58 C
ATOM 12 O2' U B 608 -65.261 27.580 79.277 1.00 63.02 O
ATOM 13 C1' U B 608 -65.841 25.822 80.843 1.00 63.43 C
ATOM 14 N1 U B 608 -64.877 24.736 80.664 1.00 63.00 N
ATOM 15 C2 U B 608 -63.636 24.717 81.301 1.00 62.36 C
ATOM 16 O2 U B 608 -63.203 25.587 82.048 1.00 62.07 O
ATOM 17 N3 U B 608 -62.873 23.616 81.023 1.00 62.08 N
ATOM 18 C4 U B 608 -63.220 22.584 80.205 1.00 62.37 C
ATOM 19 O4 U B 608 -62.440 21.668 80.036 1.00 62.11 O
ATOM 20 C5 U B 608 -64.495 22.671 79.604 1.00 63.02 C
ATOM 21 C6 U B 608 -65.255 23.717 79.854 1.00 63.31 C
ATOM 22 P G B 609 -68.628 29.066 81.300 1.00 60.84 P
ATOM 23 OP1 G B 609 -69.478 29.381 80.129 1.00 61.35 O
ATOM 24 OP2 G B 609 -68.016 30.200 82.099 1.00 60.48 O
ATOM 25 O5' G B 609 -69.394 28.073 82.261 1.00 61.35 O
TER

Atoms:
OP1: (-76.876,20.171,71.857)
OP2: (-78.229,21.333,73.698)
C3': (-74.203,23.868,74.693)
C1': (-72.147,22.916,74.151)
C5': (-75.381,21.560,74.549)
O4': (-72.952,21.835,74.573)
C8: (-69.768,22.555,73.299)
O2': (-72.534,25.196,73.449)
C6: (-70.116,20.859,70.285)
C5: (-70.131,21.530,71.494)
C4: (-71.385,21.779,72.026)
P: (-77.170,21.393,72.645)
C4': (-74.214,22.379,75.064)
C2': (-73.133,23.931,73.606)
C2: (-72.442,20.817,70.390)
N1: (-71.311,20.517,69.754)
N3: (-72.588,21.450,71.537)
N6: (-69.000,20.545,69.645)
N7: (-69.116,22.022,72.295)
N9: (-71.145,22.438,73.195)
O5': (-75.820,21.978,73.265)
O3': (-73.746,24.611,75.818)
C4: (-63.220,22.584,80.205)
N3: (-62.873,23.616,81.023)
OP1: (-70.167,24.239,76.874)
OP2: (-67.711,23.941,76.159)
C2: (-63.636,24.717,81.301)
C1': (-65.841,25.822,80.843)
C3': (-67.570,27.100,79.890)
O5': (-68.302,24.967,78.395)
O4': (-67.060,25.246,81.273)
C5': (-68.882,24.935,79.701)
P: (-68.748,23.961,77.244)
C4': (-68.181,25.915,80.613)
C2': (-66.185,26.572,79.555)
O2': (-65.261,27.580,79.277)
N1: (-64.877,24.736,80.664)
O4: (-62.440,21.668,80.036)
O2: (-63.203,25.587,82.048)
C6: (-65.255,23.717,79.854)
C5: (-64.495,22.671,79.604)
O3': (-67.402,28.183,80.794)
Image (generated by PyMOL):
PyMOL image
show in jmol