Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11247:12611
Extra
PDB:
ATOM 1 O3' A A1246 24.714 11.043 28.821 1.00 43.08 O
ATOM 2 P A A1247 26.109 10.511 29.423 1.00 49.15 P
ATOM 3 OP1 A A1247 27.153 10.884 28.468 1.00 49.31 O
ATOM 4 OP2 A A1247 25.946 9.080 29.794 1.00 48.93 O
ATOM 5 O5' A A1247 26.219 11.371 30.710 1.00 48.95 O
ATOM 6 C5' A A1247 25.296 11.146 31.721 1.00 48.80 C
ATOM 7 C4' A A1247 25.498 12.047 32.870 1.00 48.64 C
ATOM 8 O4' A A1247 24.267 12.052 33.603 1.00 48.62 O
ATOM 9 C3' A A1247 26.598 11.629 33.851 1.00 48.26 C
ATOM 10 O3' A A1247 27.279 12.785 34.303 1.00 48.25 O
ATOM 11 C2' A A1247 25.838 11.027 35.024 1.00 48.03 C
ATOM 12 O2' A A1247 26.444 11.281 36.273 1.00 47.76 O
ATOM 13 C1' A A1247 24.503 11.742 34.943 1.00 48.28 C
ATOM 14 N9 A A1247 23.370 10.985 35.437 1.00 48.22 N
ATOM 15 C8 A A1247 23.213 9.781 36.064 1.00 47.98 C
ATOM 16 N7 A A1247 21.948 9.574 36.431 1.00 48.04 N
ATOM 17 C5 A A1247 21.289 10.729 36.016 1.00 48.33 C
ATOM 18 C6 A A1247 19.982 11.187 36.064 1.00 48.55 C
ATOM 19 N6 A A1247 18.961 10.518 36.577 1.00 48.50 N
ATOM 20 N1 A A1247 19.707 12.377 35.546 1.00 48.84 N
ATOM 21 C2 A A1247 20.654 13.103 34.997 1.00 48.92 C
ATOM 22 N3 A A1247 21.910 12.788 34.890 1.00 48.74 N
ATOM 23 C4 A A1247 22.156 11.586 35.414 1.00 48.45 C
ATOM 24 P A A1248 28.880 12.875 34.202 1.00 36.36 P
ATOM 25 OP1 A A1248 29.204 13.320 32.827 1.00 36.67 O
ATOM 26 OP2 A A1248 29.411 11.575 34.706 1.00 36.05 O
ATOM 27 O5' A A1248 29.238 14.061 35.207 1.00 36.28 O
TER
ATOM 1 O3' U B2610 23.332 5.947 35.255 1.00 45.04 O
ATOM 2 P U B2611 24.773 5.788 35.880 1.00 43.29 P
ATOM 3 OP1 U B2611 25.520 7.003 35.491 1.00 43.39 O
ATOM 4 OP2 U B2611 25.307 4.460 35.499 1.00 43.19 O
ATOM 5 O5' U B2611 24.469 5.803 37.417 1.00 43.03 O
ATOM 6 C5' U B2611 23.344 6.465 37.920 1.00 43.12 C
ATOM 7 C4' U B2611 22.767 5.728 39.094 1.00 42.91 C
ATOM 8 O4' U B2611 22.132 4.517 38.634 1.00 42.96 O
ATOM 9 C3' U B2611 23.772 5.302 40.151 1.00 42.58 C
ATOM 10 O3' U B2611 23.215 5.503 41.429 1.00 42.44 O
ATOM 11 C2' U B2611 23.925 3.804 39.907 1.00 42.48 C
ATOM 12 O2' U B2611 24.288 3.063 41.050 1.00 42.19 O
ATOM 13 C1' U B2611 22.539 3.443 39.434 1.00 42.69 C
ATOM 14 N1 U B2611 22.473 2.214 38.626 1.00 42.75 N
ATOM 15 C2 U B2611 21.492 1.325 38.992 1.00 42.75 C
ATOM 16 O2 U B2611 20.743 1.610 39.912 1.00 42.69 O
ATOM 17 N3 U B2611 21.437 0.182 38.246 1.00 42.82 N
ATOM 18 C4 U B2611 22.249 -0.155 37.194 1.00 42.91 C
ATOM 19 O4 U B2611 22.139 -1.217 36.596 1.00 42.98 O
ATOM 20 C5 U B2611 23.231 0.811 36.912 1.00 42.90 C
ATOM 21 C6 U B2611 23.325 1.942 37.606 1.00 42.83 C
ATOM 22 P U B2612 23.132 6.954 42.063 1.00 64.66 P
ATOM 23 OP1 U B2612 23.071 7.922 40.996 1.00 64.93 O
ATOM 24 OP2 U B2612 24.183 7.082 43.054 1.00 64.41 O
ATOM 25 O5' U B2612 21.773 6.842 42.784 1.00 64.69 O
TER
ATOM 2 P A A1247 26.109 10.511 29.423 1.00 49.15 P
ATOM 3 OP1 A A1247 27.153 10.884 28.468 1.00 49.31 O
ATOM 4 OP2 A A1247 25.946 9.080 29.794 1.00 48.93 O
ATOM 5 O5' A A1247 26.219 11.371 30.710 1.00 48.95 O
ATOM 6 C5' A A1247 25.296 11.146 31.721 1.00 48.80 C
ATOM 7 C4' A A1247 25.498 12.047 32.870 1.00 48.64 C
ATOM 8 O4' A A1247 24.267 12.052 33.603 1.00 48.62 O
ATOM 9 C3' A A1247 26.598 11.629 33.851 1.00 48.26 C
ATOM 10 O3' A A1247 27.279 12.785 34.303 1.00 48.25 O
ATOM 11 C2' A A1247 25.838 11.027 35.024 1.00 48.03 C
ATOM 12 O2' A A1247 26.444 11.281 36.273 1.00 47.76 O
ATOM 13 C1' A A1247 24.503 11.742 34.943 1.00 48.28 C
ATOM 14 N9 A A1247 23.370 10.985 35.437 1.00 48.22 N
ATOM 15 C8 A A1247 23.213 9.781 36.064 1.00 47.98 C
ATOM 16 N7 A A1247 21.948 9.574 36.431 1.00 48.04 N
ATOM 17 C5 A A1247 21.289 10.729 36.016 1.00 48.33 C
ATOM 18 C6 A A1247 19.982 11.187 36.064 1.00 48.55 C
ATOM 19 N6 A A1247 18.961 10.518 36.577 1.00 48.50 N
ATOM 20 N1 A A1247 19.707 12.377 35.546 1.00 48.84 N
ATOM 21 C2 A A1247 20.654 13.103 34.997 1.00 48.92 C
ATOM 22 N3 A A1247 21.910 12.788 34.890 1.00 48.74 N
ATOM 23 C4 A A1247 22.156 11.586 35.414 1.00 48.45 C
ATOM 24 P A A1248 28.880 12.875 34.202 1.00 36.36 P
ATOM 25 OP1 A A1248 29.204 13.320 32.827 1.00 36.67 O
ATOM 26 OP2 A A1248 29.411 11.575 34.706 1.00 36.05 O
ATOM 27 O5' A A1248 29.238 14.061 35.207 1.00 36.28 O
TER
ATOM 1 O3' U B2610 23.332 5.947 35.255 1.00 45.04 O
ATOM 2 P U B2611 24.773 5.788 35.880 1.00 43.29 P
ATOM 3 OP1 U B2611 25.520 7.003 35.491 1.00 43.39 O
ATOM 4 OP2 U B2611 25.307 4.460 35.499 1.00 43.19 O
ATOM 5 O5' U B2611 24.469 5.803 37.417 1.00 43.03 O
ATOM 6 C5' U B2611 23.344 6.465 37.920 1.00 43.12 C
ATOM 7 C4' U B2611 22.767 5.728 39.094 1.00 42.91 C
ATOM 8 O4' U B2611 22.132 4.517 38.634 1.00 42.96 O
ATOM 9 C3' U B2611 23.772 5.302 40.151 1.00 42.58 C
ATOM 10 O3' U B2611 23.215 5.503 41.429 1.00 42.44 O
ATOM 11 C2' U B2611 23.925 3.804 39.907 1.00 42.48 C
ATOM 12 O2' U B2611 24.288 3.063 41.050 1.00 42.19 O
ATOM 13 C1' U B2611 22.539 3.443 39.434 1.00 42.69 C
ATOM 14 N1 U B2611 22.473 2.214 38.626 1.00 42.75 N
ATOM 15 C2 U B2611 21.492 1.325 38.992 1.00 42.75 C
ATOM 16 O2 U B2611 20.743 1.610 39.912 1.00 42.69 O
ATOM 17 N3 U B2611 21.437 0.182 38.246 1.00 42.82 N
ATOM 18 C4 U B2611 22.249 -0.155 37.194 1.00 42.91 C
ATOM 19 O4 U B2611 22.139 -1.217 36.596 1.00 42.98 O
ATOM 20 C5 U B2611 23.231 0.811 36.912 1.00 42.90 C
ATOM 21 C6 U B2611 23.325 1.942 37.606 1.00 42.83 C
ATOM 22 P U B2612 23.132 6.954 42.063 1.00 64.66 P
ATOM 23 OP1 U B2612 23.071 7.922 40.996 1.00 64.93 O
ATOM 24 OP2 U B2612 24.183 7.082 43.054 1.00 64.41 O
ATOM 25 O5' U B2612 21.773 6.842 42.784 1.00 64.69 O
TER
Atoms:
OP1: (27.153,10.884,28.468)
OP2: (25.946,9.080,29.794)
C3': (26.598,11.629,33.851)
C1': (24.503,11.742,34.943)
C5': (25.296,11.146,31.721)
O4': (24.267,12.052,33.603)
C8: (23.213,9.781,36.064)
O2': (26.444,11.281,36.273)
C6: (19.982,11.187,36.064)
C5: (21.289,10.729,36.016)
C4: (22.156,11.586,35.414)
P: (26.109,10.511,29.423)
C4': (25.498,12.047,32.870)
C2': (25.838,11.027,35.024)
C2: (20.654,13.103,34.997)
N1: (19.707,12.377,35.546)
N3: (21.910,12.788,34.890)
N6: (18.961,10.518,36.577)
N7: (21.948,9.574,36.431)
N9: (23.370,10.985,35.437)
O5': (26.219,11.371,30.710)
O3': (27.279,12.785,34.303)
OP2: (25.946,9.080,29.794)
C3': (26.598,11.629,33.851)
C1': (24.503,11.742,34.943)
C5': (25.296,11.146,31.721)
O4': (24.267,12.052,33.603)
C8: (23.213,9.781,36.064)
O2': (26.444,11.281,36.273)
C6: (19.982,11.187,36.064)
C5: (21.289,10.729,36.016)
C4: (22.156,11.586,35.414)
P: (26.109,10.511,29.423)
C4': (25.498,12.047,32.870)
C2': (25.838,11.027,35.024)
C2: (20.654,13.103,34.997)
N1: (19.707,12.377,35.546)
N3: (21.910,12.788,34.890)
N6: (18.961,10.518,36.577)
N7: (21.948,9.574,36.431)
N9: (23.370,10.985,35.437)
O5': (26.219,11.371,30.710)
O3': (27.279,12.785,34.303)
C4: (22.249,-0.155,37.194)
N3: (21.437,0.182,38.246)
OP1: (25.520,7.003,35.491)
OP2: (25.307,4.460,35.499)
C2: (21.492,1.325,38.992)
C1': (22.539,3.443,39.434)
C3': (23.772,5.302,40.151)
O5': (24.469,5.803,37.417)
O4': (22.132,4.517,38.634)
C5': (23.344,6.465,37.920)
P: (24.773,5.788,35.880)
C4': (22.767,5.728,39.094)
C2': (23.925,3.804,39.907)
O2': (24.288,3.063,41.050)
N1: (22.473,2.214,38.626)
O4: (22.139,-1.217,36.596)
O2: (20.743,1.610,39.912)
C6: (23.325,1.942,37.606)
C5: (23.231,0.811,36.912)
O3': (23.215,5.503,41.429)
N3: (21.437,0.182,38.246)
OP1: (25.520,7.003,35.491)
OP2: (25.307,4.460,35.499)
C2: (21.492,1.325,38.992)
C1': (22.539,3.443,39.434)
C3': (23.772,5.302,40.151)
O5': (24.469,5.803,37.417)
O4': (22.132,4.517,38.634)
C5': (23.344,6.465,37.920)
P: (24.773,5.788,35.880)
C4': (22.767,5.728,39.094)
C2': (23.925,3.804,39.907)
O2': (24.288,3.063,41.050)
N1: (22.473,2.214,38.626)
O4: (22.139,-1.217,36.596)
O2: (20.743,1.610,39.912)
C6: (23.325,1.942,37.606)
C5: (23.231,0.811,36.912)
O3': (23.215,5.503,41.429)
Image (generated by PyMOL):