Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:956:927
Extra
PDB:
ATOM 1 O3' A A 55 68.937 16.361 115.687 1.00 70.25 O
ATOM 2 P A A 56 67.709 17.275 115.196 1.00 70.58 P
ATOM 3 OP1 A A 56 67.243 18.053 116.373 1.00 70.24 O
ATOM 4 OP2 A A 56 66.741 16.422 114.448 1.00 68.97 O
ATOM 5 O5' A A 56 68.373 18.278 114.150 1.00 70.36 O
ATOM 6 C5' A A 56 68.939 17.780 112.929 1.00 68.41 C
ATOM 7 C4' A A 56 69.763 18.839 112.247 1.00 66.38 C
ATOM 8 O4' A A 56 70.702 18.170 111.368 1.00 65.96 O
ATOM 9 C3' A A 56 69.009 19.801 111.338 1.00 65.57 C
ATOM 10 O3' A A 56 68.442 20.911 112.035 1.00 63.10 O
ATOM 11 C2' A A 56 70.105 20.248 110.382 1.00 66.73 C
ATOM 12 O2' A A 56 70.938 21.227 110.968 1.00 68.41 O
ATOM 13 C1' A A 56 70.899 18.949 110.200 1.00 66.78 C
ATOM 14 N9 A A 56 70.478 18.157 109.041 1.00 66.67 N
ATOM 15 C8 A A 56 70.880 18.310 107.733 1.00 67.97 C
ATOM 16 N7 A A 56 70.308 17.471 106.901 1.00 65.36 N
ATOM 17 C5 A A 56 69.482 16.712 107.713 1.00 64.63 C
ATOM 18 C6 A A 56 68.605 15.660 107.434 1.00 65.02 C
ATOM 19 N6 A A 56 68.401 15.175 106.208 1.00 63.50 N
ATOM 20 N1 A A 56 67.932 15.115 108.472 1.00 66.86 N
ATOM 21 C2 A A 56 68.139 15.608 109.705 1.00 65.49 C
ATOM 22 N3 A A 56 68.936 16.595 110.090 1.00 63.22 N
ATOM 23 C4 A A 56 69.585 17.114 109.035 1.00 64.73 C
ATOM 24 P G A 57 66.948 21.404 111.680 1.00 62.44 P
ATOM 25 OP1 G A 57 66.727 22.700 112.364 1.00 61.12 O
ATOM 26 OP2 G A 57 66.017 20.278 111.937 1.00 63.68 O
ATOM 27 O5' G A 57 66.975 21.666 110.108 1.00 62.13 O
TER
ATOM 1 O3' C B 26 64.703 16.643 97.339 1.00 63.66 O
ATOM 2 P U B 27 66.291 16.451 97.264 1.00 64.76 P
ATOM 3 OP1 U B 27 66.788 17.160 96.055 1.00 65.46 O
ATOM 4 OP2 U B 27 66.583 15.005 97.432 1.00 65.88 O
ATOM 5 O5' U B 27 66.791 17.222 98.560 1.00 61.18 O
ATOM 6 C5' U B 27 68.059 16.940 99.130 1.00 59.68 C
ATOM 7 C4' U B 27 67.974 17.015 100.628 1.00 60.50 C
ATOM 8 O4' U B 27 66.859 16.218 101.099 1.00 61.79 O
ATOM 9 C3' U B 27 69.189 16.432 101.315 1.00 60.41 C
ATOM 10 O3' U B 27 70.224 17.400 101.377 1.00 60.78 O
ATOM 11 C2' U B 27 68.635 16.000 102.665 1.00 60.44 C
ATOM 12 O2' U B 27 68.497 17.049 103.599 1.00 58.52 O
ATOM 13 C1' U B 27 67.245 15.493 102.261 1.00 62.22 C
ATOM 14 N1 U B 27 67.202 14.052 101.941 1.00 63.61 N
ATOM 15 C2 U B 27 67.594 13.147 102.921 1.00 62.82 C
ATOM 16 O2 U B 27 67.991 13.489 104.023 1.00 61.50 O
ATOM 17 N3 U B 27 67.508 11.826 102.556 1.00 63.42 N
ATOM 18 C4 U B 27 67.086 11.322 101.341 1.00 64.04 C
ATOM 19 O4 U B 27 66.995 10.102 101.191 1.00 64.55 O
ATOM 20 C5 U B 27 66.716 12.314 100.380 1.00 63.69 C
ATOM 21 C6 U B 27 66.781 13.607 100.702 1.00 63.15 C
ATOM 22 P C B 28 71.541 17.212 100.480 1.00 59.42 P
ATOM 23 OP1 C B 28 71.934 18.558 100.000 1.00 62.28 O
ATOM 24 OP2 C B 28 71.302 16.131 99.491 1.00 59.00 O
ATOM 25 O5' C B 28 72.626 16.737 101.543 1.00 60.65 O
TER
ATOM 2 P A A 56 67.709 17.275 115.196 1.00 70.58 P
ATOM 3 OP1 A A 56 67.243 18.053 116.373 1.00 70.24 O
ATOM 4 OP2 A A 56 66.741 16.422 114.448 1.00 68.97 O
ATOM 5 O5' A A 56 68.373 18.278 114.150 1.00 70.36 O
ATOM 6 C5' A A 56 68.939 17.780 112.929 1.00 68.41 C
ATOM 7 C4' A A 56 69.763 18.839 112.247 1.00 66.38 C
ATOM 8 O4' A A 56 70.702 18.170 111.368 1.00 65.96 O
ATOM 9 C3' A A 56 69.009 19.801 111.338 1.00 65.57 C
ATOM 10 O3' A A 56 68.442 20.911 112.035 1.00 63.10 O
ATOM 11 C2' A A 56 70.105 20.248 110.382 1.00 66.73 C
ATOM 12 O2' A A 56 70.938 21.227 110.968 1.00 68.41 O
ATOM 13 C1' A A 56 70.899 18.949 110.200 1.00 66.78 C
ATOM 14 N9 A A 56 70.478 18.157 109.041 1.00 66.67 N
ATOM 15 C8 A A 56 70.880 18.310 107.733 1.00 67.97 C
ATOM 16 N7 A A 56 70.308 17.471 106.901 1.00 65.36 N
ATOM 17 C5 A A 56 69.482 16.712 107.713 1.00 64.63 C
ATOM 18 C6 A A 56 68.605 15.660 107.434 1.00 65.02 C
ATOM 19 N6 A A 56 68.401 15.175 106.208 1.00 63.50 N
ATOM 20 N1 A A 56 67.932 15.115 108.472 1.00 66.86 N
ATOM 21 C2 A A 56 68.139 15.608 109.705 1.00 65.49 C
ATOM 22 N3 A A 56 68.936 16.595 110.090 1.00 63.22 N
ATOM 23 C4 A A 56 69.585 17.114 109.035 1.00 64.73 C
ATOM 24 P G A 57 66.948 21.404 111.680 1.00 62.44 P
ATOM 25 OP1 G A 57 66.727 22.700 112.364 1.00 61.12 O
ATOM 26 OP2 G A 57 66.017 20.278 111.937 1.00 63.68 O
ATOM 27 O5' G A 57 66.975 21.666 110.108 1.00 62.13 O
TER
ATOM 1 O3' C B 26 64.703 16.643 97.339 1.00 63.66 O
ATOM 2 P U B 27 66.291 16.451 97.264 1.00 64.76 P
ATOM 3 OP1 U B 27 66.788 17.160 96.055 1.00 65.46 O
ATOM 4 OP2 U B 27 66.583 15.005 97.432 1.00 65.88 O
ATOM 5 O5' U B 27 66.791 17.222 98.560 1.00 61.18 O
ATOM 6 C5' U B 27 68.059 16.940 99.130 1.00 59.68 C
ATOM 7 C4' U B 27 67.974 17.015 100.628 1.00 60.50 C
ATOM 8 O4' U B 27 66.859 16.218 101.099 1.00 61.79 O
ATOM 9 C3' U B 27 69.189 16.432 101.315 1.00 60.41 C
ATOM 10 O3' U B 27 70.224 17.400 101.377 1.00 60.78 O
ATOM 11 C2' U B 27 68.635 16.000 102.665 1.00 60.44 C
ATOM 12 O2' U B 27 68.497 17.049 103.599 1.00 58.52 O
ATOM 13 C1' U B 27 67.245 15.493 102.261 1.00 62.22 C
ATOM 14 N1 U B 27 67.202 14.052 101.941 1.00 63.61 N
ATOM 15 C2 U B 27 67.594 13.147 102.921 1.00 62.82 C
ATOM 16 O2 U B 27 67.991 13.489 104.023 1.00 61.50 O
ATOM 17 N3 U B 27 67.508 11.826 102.556 1.00 63.42 N
ATOM 18 C4 U B 27 67.086 11.322 101.341 1.00 64.04 C
ATOM 19 O4 U B 27 66.995 10.102 101.191 1.00 64.55 O
ATOM 20 C5 U B 27 66.716 12.314 100.380 1.00 63.69 C
ATOM 21 C6 U B 27 66.781 13.607 100.702 1.00 63.15 C
ATOM 22 P C B 28 71.541 17.212 100.480 1.00 59.42 P
ATOM 23 OP1 C B 28 71.934 18.558 100.000 1.00 62.28 O
ATOM 24 OP2 C B 28 71.302 16.131 99.491 1.00 59.00 O
ATOM 25 O5' C B 28 72.626 16.737 101.543 1.00 60.65 O
TER
Atoms:
OP1: (67.243,18.053,116.373)
OP2: (66.741,16.422,114.448)
C3': (69.009,19.801,111.338)
C1': (70.899,18.949,110.200)
C5': (68.939,17.780,112.929)
O4': (70.702,18.170,111.368)
C8: (70.880,18.310,107.733)
O2': (70.938,21.227,110.968)
C6: (68.605,15.660,107.434)
C5: (69.482,16.712,107.713)
C4: (69.585,17.114,109.035)
P: (67.709,17.275,115.196)
C4': (69.763,18.839,112.247)
C2': (70.105,20.248,110.382)
C2: (68.139,15.608,109.705)
N1: (67.932,15.115,108.472)
N3: (68.936,16.595,110.090)
N6: (68.401,15.175,106.208)
N7: (70.308,17.471,106.901)
N9: (70.478,18.157,109.041)
O5': (68.373,18.278,114.150)
O3': (68.442,20.911,112.035)
OP2: (66.741,16.422,114.448)
C3': (69.009,19.801,111.338)
C1': (70.899,18.949,110.200)
C5': (68.939,17.780,112.929)
O4': (70.702,18.170,111.368)
C8: (70.880,18.310,107.733)
O2': (70.938,21.227,110.968)
C6: (68.605,15.660,107.434)
C5: (69.482,16.712,107.713)
C4: (69.585,17.114,109.035)
P: (67.709,17.275,115.196)
C4': (69.763,18.839,112.247)
C2': (70.105,20.248,110.382)
C2: (68.139,15.608,109.705)
N1: (67.932,15.115,108.472)
N3: (68.936,16.595,110.090)
N6: (68.401,15.175,106.208)
N7: (70.308,17.471,106.901)
N9: (70.478,18.157,109.041)
O5': (68.373,18.278,114.150)
O3': (68.442,20.911,112.035)
C4: (67.086,11.322,101.341)
N3: (67.508,11.826,102.556)
OP1: (66.788,17.160,96.055)
OP2: (66.583,15.005,97.432)
C2: (67.594,13.147,102.921)
C1': (67.245,15.493,102.261)
C3': (69.189,16.432,101.315)
O5': (66.791,17.222,98.560)
O4': (66.859,16.218,101.099)
C5': (68.059,16.940,99.130)
P: (66.291,16.451,97.264)
C4': (67.974,17.015,100.628)
C2': (68.635,16.000,102.665)
O2': (68.497,17.049,103.599)
N1: (67.202,14.052,101.941)
O4: (66.995,10.102,101.191)
O2: (67.991,13.489,104.023)
C6: (66.781,13.607,100.702)
C5: (66.716,12.314,100.380)
O3': (70.224,17.400,101.377)
N3: (67.508,11.826,102.556)
OP1: (66.788,17.160,96.055)
OP2: (66.583,15.005,97.432)
C2: (67.594,13.147,102.921)
C1': (67.245,15.493,102.261)
C3': (69.189,16.432,101.315)
O5': (66.791,17.222,98.560)
O4': (66.859,16.218,101.099)
C5': (68.059,16.940,99.130)
P: (66.291,16.451,97.264)
C4': (67.974,17.015,100.628)
C2': (68.635,16.000,102.665)
O2': (68.497,17.049,103.599)
N1: (67.202,14.052,101.941)
O4: (66.995,10.102,101.191)
O2: (67.991,13.489,104.023)
C6: (66.781,13.607,100.702)
C5: (66.716,12.314,100.380)
O3': (70.224,17.400,101.377)
Image (generated by PyMOL):