Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01879:01876
Extra
PDB:
ATOM 1 O3' C A1878 98.651 82.484 32.559 1.00 62.75 O
ATOM 2 P A A1879 99.019 82.507 34.120 1.00 63.32 P
ATOM 3 OP1 A A1879 100.010 83.595 34.334 1.00 63.34 O
ATOM 4 OP2 A A1879 99.364 81.117 34.504 1.00 64.00 O
ATOM 5 O5' A A1879 97.661 82.928 34.842 1.00 62.17 O
ATOM 6 C5' A A1879 97.171 84.276 34.738 1.00 60.47 C
ATOM 7 C4' A A1879 95.838 84.428 35.437 1.00 59.10 C
ATOM 8 O4' A A1879 94.838 83.587 34.814 1.00 58.37 O
ATOM 9 C3' A A1879 95.746 83.972 36.879 1.00 58.16 C
ATOM 10 O3' A A1879 96.349 84.907 37.760 1.00 57.91 O
ATOM 11 C2' A A1879 94.234 83.926 37.082 1.00 58.01 C
ATOM 12 O2' A A1879 93.688 85.206 37.319 1.00 58.66 O
ATOM 13 C1' A A1879 93.752 83.447 35.709 1.00 56.97 C
ATOM 14 N9 A A1879 93.289 82.063 35.682 1.00 56.13 N
ATOM 15 C8 A A1879 94.002 80.930 35.390 1.00 56.16 C
ATOM 16 N7 A A1879 93.288 79.831 35.434 1.00 57.18 N
ATOM 17 C5 A A1879 92.018 80.272 35.780 1.00 57.53 C
ATOM 18 C6 A A1879 90.797 79.594 35.980 1.00 57.22 C
ATOM 19 N6 A A1879 90.650 78.275 35.859 1.00 56.92 N
ATOM 20 N1 A A1879 89.719 80.332 36.317 1.00 57.23 N
ATOM 21 C2 A A1879 89.864 81.655 36.449 1.00 57.54 C
ATOM 22 N3 A A1879 90.954 82.404 36.288 1.00 58.26 N
ATOM 23 C4 A A1879 92.008 81.644 35.947 1.00 57.30 C
ATOM 24 P A A1880 96.895 84.416 39.187 1.00 59.48 P
ATOM 25 OP1 A A1880 97.769 85.479 39.740 1.00 60.43 O
ATOM 26 OP2 A A1880 97.434 83.042 39.027 1.00 59.63 O
ATOM 27 O5' A A1880 95.584 84.351 40.089 1.00 59.02 O
TER
ATOM 1 O3' G B1875 97.223 72.383 38.309 1.00 68.31 O
ATOM 2 P U B1876 97.011 71.972 36.769 1.00 70.13 P
ATOM 3 OP1 U B1876 96.060 70.825 36.720 1.00 70.34 O
ATOM 4 OP2 U B1876 98.354 71.851 36.133 1.00 69.95 O
ATOM 5 O5' U B1876 96.270 73.223 36.128 1.00 69.01 O
ATOM 6 C5' U B1876 94.915 73.526 36.481 1.00 67.68 C
ATOM 7 C4' U B1876 94.546 74.886 35.967 1.00 66.57 C
ATOM 8 O4' U B1876 95.434 75.860 36.561 1.00 65.81 O
ATOM 9 C3' U B1876 94.725 75.084 34.470 1.00 66.47 C
ATOM 10 O3' U B1876 93.570 74.628 33.767 1.00 68.59 O
ATOM 11 C2' U B1876 94.867 76.596 34.366 1.00 66.52 C
ATOM 12 O2' U B1876 93.615 77.251 34.412 1.00 66.45 O
ATOM 13 C1' U B1876 95.646 76.918 35.646 1.00 66.28 C
ATOM 14 N1 U B1876 97.092 77.120 35.467 1.00 66.25 N
ATOM 15 C2 U B1876 97.513 78.391 35.128 1.00 66.80 C
ATOM 16 O2 U B1876 96.744 79.322 34.975 1.00 67.00 O
ATOM 17 N3 U B1876 98.869 78.535 34.973 1.00 67.76 N
ATOM 18 C4 U B1876 99.829 77.562 35.116 1.00 68.21 C
ATOM 19 O4 U B1876 101.015 77.857 34.952 1.00 68.32 O
ATOM 20 C5 U B1876 99.319 76.271 35.468 1.00 68.18 C
ATOM 21 C6 U B1876 98.001 76.098 35.627 1.00 67.14 C
ATOM 22 P A B1877 93.729 73.849 32.372 1.00 69.03 P
ATOM 23 OP1 A B1877 92.395 73.852 31.723 1.00 69.79 O
ATOM 24 OP2 A B1877 94.411 72.561 32.633 1.00 69.84 O
ATOM 25 O5' A B1877 94.697 74.773 31.508 1.00 70.87 O
TER
ATOM 2 P A A1879 99.019 82.507 34.120 1.00 63.32 P
ATOM 3 OP1 A A1879 100.010 83.595 34.334 1.00 63.34 O
ATOM 4 OP2 A A1879 99.364 81.117 34.504 1.00 64.00 O
ATOM 5 O5' A A1879 97.661 82.928 34.842 1.00 62.17 O
ATOM 6 C5' A A1879 97.171 84.276 34.738 1.00 60.47 C
ATOM 7 C4' A A1879 95.838 84.428 35.437 1.00 59.10 C
ATOM 8 O4' A A1879 94.838 83.587 34.814 1.00 58.37 O
ATOM 9 C3' A A1879 95.746 83.972 36.879 1.00 58.16 C
ATOM 10 O3' A A1879 96.349 84.907 37.760 1.00 57.91 O
ATOM 11 C2' A A1879 94.234 83.926 37.082 1.00 58.01 C
ATOM 12 O2' A A1879 93.688 85.206 37.319 1.00 58.66 O
ATOM 13 C1' A A1879 93.752 83.447 35.709 1.00 56.97 C
ATOM 14 N9 A A1879 93.289 82.063 35.682 1.00 56.13 N
ATOM 15 C8 A A1879 94.002 80.930 35.390 1.00 56.16 C
ATOM 16 N7 A A1879 93.288 79.831 35.434 1.00 57.18 N
ATOM 17 C5 A A1879 92.018 80.272 35.780 1.00 57.53 C
ATOM 18 C6 A A1879 90.797 79.594 35.980 1.00 57.22 C
ATOM 19 N6 A A1879 90.650 78.275 35.859 1.00 56.92 N
ATOM 20 N1 A A1879 89.719 80.332 36.317 1.00 57.23 N
ATOM 21 C2 A A1879 89.864 81.655 36.449 1.00 57.54 C
ATOM 22 N3 A A1879 90.954 82.404 36.288 1.00 58.26 N
ATOM 23 C4 A A1879 92.008 81.644 35.947 1.00 57.30 C
ATOM 24 P A A1880 96.895 84.416 39.187 1.00 59.48 P
ATOM 25 OP1 A A1880 97.769 85.479 39.740 1.00 60.43 O
ATOM 26 OP2 A A1880 97.434 83.042 39.027 1.00 59.63 O
ATOM 27 O5' A A1880 95.584 84.351 40.089 1.00 59.02 O
TER
ATOM 1 O3' G B1875 97.223 72.383 38.309 1.00 68.31 O
ATOM 2 P U B1876 97.011 71.972 36.769 1.00 70.13 P
ATOM 3 OP1 U B1876 96.060 70.825 36.720 1.00 70.34 O
ATOM 4 OP2 U B1876 98.354 71.851 36.133 1.00 69.95 O
ATOM 5 O5' U B1876 96.270 73.223 36.128 1.00 69.01 O
ATOM 6 C5' U B1876 94.915 73.526 36.481 1.00 67.68 C
ATOM 7 C4' U B1876 94.546 74.886 35.967 1.00 66.57 C
ATOM 8 O4' U B1876 95.434 75.860 36.561 1.00 65.81 O
ATOM 9 C3' U B1876 94.725 75.084 34.470 1.00 66.47 C
ATOM 10 O3' U B1876 93.570 74.628 33.767 1.00 68.59 O
ATOM 11 C2' U B1876 94.867 76.596 34.366 1.00 66.52 C
ATOM 12 O2' U B1876 93.615 77.251 34.412 1.00 66.45 O
ATOM 13 C1' U B1876 95.646 76.918 35.646 1.00 66.28 C
ATOM 14 N1 U B1876 97.092 77.120 35.467 1.00 66.25 N
ATOM 15 C2 U B1876 97.513 78.391 35.128 1.00 66.80 C
ATOM 16 O2 U B1876 96.744 79.322 34.975 1.00 67.00 O
ATOM 17 N3 U B1876 98.869 78.535 34.973 1.00 67.76 N
ATOM 18 C4 U B1876 99.829 77.562 35.116 1.00 68.21 C
ATOM 19 O4 U B1876 101.015 77.857 34.952 1.00 68.32 O
ATOM 20 C5 U B1876 99.319 76.271 35.468 1.00 68.18 C
ATOM 21 C6 U B1876 98.001 76.098 35.627 1.00 67.14 C
ATOM 22 P A B1877 93.729 73.849 32.372 1.00 69.03 P
ATOM 23 OP1 A B1877 92.395 73.852 31.723 1.00 69.79 O
ATOM 24 OP2 A B1877 94.411 72.561 32.633 1.00 69.84 O
ATOM 25 O5' A B1877 94.697 74.773 31.508 1.00 70.87 O
TER
Atoms:
OP1: (100.010,83.595,34.334)
OP2: (99.364,81.117,34.504)
C3': (95.746,83.972,36.879)
C1': (93.752,83.447,35.709)
C5': (97.171,84.276,34.738)
O4': (94.838,83.587,34.814)
C8: (94.002,80.930,35.390)
O2': (93.688,85.206,37.319)
C6: (90.797,79.594,35.980)
C5: (92.018,80.272,35.780)
C4: (92.008,81.644,35.947)
P: (99.019,82.507,34.120)
C4': (95.838,84.428,35.437)
C2': (94.234,83.926,37.082)
C2: (89.864,81.655,36.449)
N1: (89.719,80.332,36.317)
N3: (90.954,82.404,36.288)
N6: (90.650,78.275,35.859)
N7: (93.288,79.831,35.434)
N9: (93.289,82.063,35.682)
O5': (97.661,82.928,34.842)
O3': (96.349,84.907,37.760)
OP2: (99.364,81.117,34.504)
C3': (95.746,83.972,36.879)
C1': (93.752,83.447,35.709)
C5': (97.171,84.276,34.738)
O4': (94.838,83.587,34.814)
C8: (94.002,80.930,35.390)
O2': (93.688,85.206,37.319)
C6: (90.797,79.594,35.980)
C5: (92.018,80.272,35.780)
C4: (92.008,81.644,35.947)
P: (99.019,82.507,34.120)
C4': (95.838,84.428,35.437)
C2': (94.234,83.926,37.082)
C2: (89.864,81.655,36.449)
N1: (89.719,80.332,36.317)
N3: (90.954,82.404,36.288)
N6: (90.650,78.275,35.859)
N7: (93.288,79.831,35.434)
N9: (93.289,82.063,35.682)
O5': (97.661,82.928,34.842)
O3': (96.349,84.907,37.760)
C4: (99.829,77.562,35.116)
N3: (98.869,78.535,34.973)
OP1: (96.060,70.825,36.720)
OP2: (98.354,71.851,36.133)
C2: (97.513,78.391,35.128)
C1': (95.646,76.918,35.646)
C3': (94.725,75.084,34.470)
O5': (96.270,73.223,36.128)
O4': (95.434,75.860,36.561)
C5': (94.915,73.526,36.481)
P: (97.011,71.972,36.769)
C4': (94.546,74.886,35.967)
C2': (94.867,76.596,34.366)
O2': (93.615,77.251,34.412)
N1: (97.092,77.120,35.467)
O4: (101.015,77.857,34.952)
O2: (96.744,79.322,34.975)
C6: (98.001,76.098,35.627)
C5: (99.319,76.271,35.468)
O3': (93.570,74.628,33.767)
N3: (98.869,78.535,34.973)
OP1: (96.060,70.825,36.720)
OP2: (98.354,71.851,36.133)
C2: (97.513,78.391,35.128)
C1': (95.646,76.918,35.646)
C3': (94.725,75.084,34.470)
O5': (96.270,73.223,36.128)
O4': (95.434,75.860,36.561)
C5': (94.915,73.526,36.481)
P: (97.011,71.972,36.769)
C4': (94.546,74.886,35.967)
C2': (94.867,76.596,34.366)
O2': (93.615,77.251,34.412)
N1: (97.092,77.120,35.467)
O4: (101.015,77.857,34.952)
O2: (96.744,79.322,34.975)
C6: (98.001,76.098,35.627)
C5: (99.319,76.271,35.468)
O3': (93.570,74.628,33.767)
Image (generated by PyMOL):