ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:956:927

Extra

PDB:
ATOM 1 O3' A A 55 68.939 16.218 115.534 1.00 72.96 O
ATOM 2 P A A 56 67.677 17.112 115.105 1.00 72.94 P
ATOM 3 OP1 A A 56 67.301 17.905 116.300 1.00 73.47 O
ATOM 4 OP2 A A 56 66.661 16.243 114.451 1.00 71.27 O
ATOM 5 O5' A A 56 68.259 18.106 114.005 1.00 72.70 O
ATOM 6 C5' A A 56 68.841 17.601 112.793 1.00 71.30 C
ATOM 7 C4' A A 56 69.662 18.667 112.115 1.00 69.16 C
ATOM 8 O4' A A 56 70.607 18.019 111.229 1.00 69.29 O
ATOM 9 C3' A A 56 68.907 19.639 111.216 1.00 68.77 C
ATOM 10 O3' A A 56 68.336 20.739 111.922 1.00 66.11 O
ATOM 11 C2' A A 56 70.004 20.115 110.279 1.00 70.04 C
ATOM 12 O2' A A 56 70.804 21.107 110.886 1.00 72.06 O
ATOM 13 C1' A A 56 70.821 18.832 110.088 1.00 70.13 C
ATOM 14 N9 A A 56 70.431 18.075 108.896 1.00 69.84 N
ATOM 15 C8 A A 56 70.859 18.282 107.605 1.00 70.87 C
ATOM 16 N7 A A 56 70.308 17.478 106.727 1.00 69.39 N
ATOM 17 C5 A A 56 69.467 16.683 107.489 1.00 68.79 C
ATOM 18 C6 A A 56 68.595 15.643 107.146 1.00 68.28 C
ATOM 19 N6 A A 56 68.404 15.226 105.893 1.00 66.42 N
ATOM 20 N1 A A 56 67.911 15.042 108.147 1.00 69.14 N
ATOM 21 C2 A A 56 68.095 15.479 109.406 1.00 68.85 C
ATOM 22 N3 A A 56 68.879 16.458 109.851 1.00 67.45 N
ATOM 23 C4 A A 56 69.544 17.027 108.831 1.00 68.87 C
ATOM 24 P G A 57 66.903 21.323 111.473 1.00 65.49 P
ATOM 25 OP1 G A 57 66.765 22.665 112.088 1.00 64.72 O
ATOM 26 OP2 G A 57 65.870 20.294 111.733 1.00 66.76 O
ATOM 27 O5' G A 57 67.013 21.499 109.893 1.00 64.38 O
TER

ATOM 1 O3' C B 26 64.706 16.606 97.228 1.00 65.78 O
ATOM 2 P U B 27 66.286 16.365 97.135 1.00 66.30 P
ATOM 3 OP1 U B 27 66.779 17.029 95.901 1.00 66.80 O
ATOM 4 OP2 U B 27 66.550 14.919 97.340 1.00 66.74 O
ATOM 5 O5' U B 27 66.827 17.146 98.409 1.00 63.13 O
ATOM 6 C5' U B 27 68.074 16.802 98.990 1.00 61.07 C
ATOM 7 C4' U B 27 67.991 16.894 100.486 1.00 60.95 C
ATOM 8 O4' U B 27 66.883 16.100 100.973 1.00 62.24 O
ATOM 9 C3' U B 27 69.209 16.308 101.165 1.00 60.47 C
ATOM 10 O3' U B 27 70.247 17.266 101.199 1.00 60.74 O
ATOM 11 C2' U B 27 68.672 15.906 102.528 1.00 60.37 C
ATOM 12 O2' U B 27 68.569 16.981 103.439 1.00 57.86 O
ATOM 13 C1' U B 27 67.275 15.399 102.148 1.00 62.41 C
ATOM 14 N1 U B 27 67.216 13.952 101.861 1.00 63.51 N
ATOM 15 C2 U B 27 67.643 13.067 102.845 1.00 63.04 C
ATOM 16 O2 U B 27 68.079 13.431 103.924 1.00 62.11 O
ATOM 17 N3 U B 27 67.546 11.739 102.512 1.00 63.64 N
ATOM 18 C4 U B 27 67.089 11.210 101.326 1.00 64.48 C
ATOM 19 O4 U B 27 67.046 9.985 101.185 1.00 65.18 O
ATOM 20 C5 U B 27 66.679 12.180 100.359 1.00 64.20 C
ATOM 21 C6 U B 27 66.750 13.481 100.651 1.00 63.30 C
ATOM 22 P C B 28 71.535 17.070 100.267 1.00 59.91 P
ATOM 23 OP1 C B 28 71.897 18.413 99.755 1.00 60.37 O
ATOM 24 OP2 C B 28 71.280 15.967 99.304 1.00 59.29 O
ATOM 25 O5' C B 28 72.652 16.613 101.306 1.00 62.03 O
TER

Atoms:
OP1: (67.301,17.905,116.300)
OP2: (66.661,16.243,114.451)
C3': (68.907,19.639,111.216)
C1': (70.821,18.832,110.088)
C5': (68.841,17.601,112.793)
O4': (70.607,18.019,111.229)
C8: (70.859,18.282,107.605)
O2': (70.804,21.107,110.886)
C6: (68.595,15.643,107.146)
C5: (69.467,16.683,107.489)
C4: (69.544,17.027,108.831)
P: (67.677,17.112,115.105)
C4': (69.662,18.667,112.115)
C2': (70.004,20.115,110.279)
C2: (68.095,15.479,109.406)
N1: (67.911,15.042,108.147)
N3: (68.879,16.458,109.851)
N6: (68.404,15.226,105.893)
N7: (70.308,17.478,106.727)
N9: (70.431,18.075,108.896)
O5': (68.259,18.106,114.005)
O3': (68.336,20.739,111.922)
C4: (67.089,11.210,101.326)
N3: (67.546,11.739,102.512)
OP1: (66.779,17.029,95.901)
OP2: (66.550,14.919,97.340)
C2: (67.643,13.067,102.845)
C1': (67.275,15.399,102.148)
C3': (69.209,16.308,101.165)
O5': (66.827,17.146,98.409)
O4': (66.883,16.100,100.973)
C5': (68.074,16.802,98.990)
P: (66.286,16.365,97.135)
C4': (67.991,16.894,100.486)
C2': (68.672,15.906,102.528)
O2': (68.569,16.981,103.439)
N1: (67.216,13.952,101.861)
O4: (67.046,9.985,101.185)
O2: (68.079,13.431,103.924)
C6: (66.750,13.481,100.651)
C5: (66.679,12.180,100.359)
O3': (70.247,17.266,101.199)
Image (generated by PyMOL):
PyMOL image
show in jmol