ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:956:927

Extra

PDB:
ATOM 1 O3' A A 55 68.831 16.284 115.411 1.00 77.42 O
ATOM 2 P A A 56 67.513 17.081 114.959 1.00 77.61 P
ATOM 3 OP1 A A 56 67.050 17.868 116.130 1.00 78.45 O
ATOM 4 OP2 A A 56 66.578 16.130 114.297 1.00 77.46 O
ATOM 5 O5' A A 56 68.038 18.087 113.844 1.00 77.10 O
ATOM 6 C5' A A 56 68.657 17.592 112.651 1.00 75.81 C
ATOM 7 C4' A A 56 69.591 18.624 112.080 1.00 74.69 C
ATOM 8 O4' A A 56 70.523 17.954 111.197 1.00 73.79 O
ATOM 9 C3' A A 56 68.952 19.700 111.211 1.00 74.71 C
ATOM 10 O3' A A 56 68.419 20.799 111.949 1.00 72.85 O
ATOM 11 C2' A A 56 70.122 20.139 110.349 1.00 75.15 C
ATOM 12 O2' A A 56 70.968 21.024 111.053 1.00 76.20 O
ATOM 13 C1' A A 56 70.838 18.805 110.109 1.00 75.17 C
ATOM 14 N9 A A 56 70.422 18.146 108.869 1.00 75.32 N
ATOM 15 C8 A A 56 70.820 18.465 107.591 1.00 76.01 C
ATOM 16 N7 A A 56 70.268 17.723 106.662 1.00 74.30 N
ATOM 17 C5 A A 56 69.456 16.854 107.372 1.00 73.59 C
ATOM 18 C6 A A 56 68.606 15.826 106.960 1.00 73.15 C
ATOM 19 N6 A A 56 68.427 15.491 105.681 1.00 71.99 N
ATOM 20 N1 A A 56 67.937 15.144 107.916 1.00 73.58 N
ATOM 21 C2 A A 56 68.128 15.486 109.202 1.00 73.84 C
ATOM 22 N3 A A 56 68.904 16.437 109.714 1.00 72.75 N
ATOM 23 C4 A A 56 69.547 17.094 108.734 1.00 74.14 C
ATOM 24 P G A 57 66.974 21.397 111.559 1.00 71.77 P
ATOM 25 OP1 G A 57 66.834 22.716 112.224 1.00 71.77 O
ATOM 26 OP2 G A 57 65.963 20.340 111.810 1.00 72.90 O
ATOM 27 O5' G A 57 67.037 21.632 109.984 1.00 70.77 O
TER

ATOM 1 O3' C B 26 64.776 16.683 97.233 1.00 72.85 O
ATOM 2 P U B 27 66.338 16.392 97.030 1.00 72.76 P
ATOM 3 OP1 U B 27 66.736 16.967 95.711 1.00 72.57 O
ATOM 4 OP2 U B 27 66.584 14.955 97.302 1.00 73.16 O
ATOM 5 O5' U B 27 66.991 17.251 98.198 1.00 71.48 O
ATOM 6 C5' U B 27 68.196 16.837 98.825 1.00 71.08 C
ATOM 7 C4' U B 27 68.046 16.906 100.319 1.00 71.62 C
ATOM 8 O4' U B 27 66.933 16.078 100.741 1.00 72.28 O
ATOM 9 C3' U B 27 69.237 16.340 101.061 1.00 71.52 C
ATOM 10 O3' U B 27 70.265 17.309 101.141 1.00 71.48 O
ATOM 11 C2' U B 27 68.637 15.948 102.402 1.00 71.51 C
ATOM 12 O2' U B 27 68.474 17.033 103.291 1.00 69.43 O
ATOM 13 C1' U B 27 67.264 15.423 101.962 1.00 73.06 C
ATOM 14 N1 U B 27 67.212 13.963 101.743 1.00 73.91 N
ATOM 15 C2 U B 27 67.615 13.130 102.786 1.00 74.51 C
ATOM 16 O2 U B 27 68.037 13.551 103.854 1.00 74.19 O
ATOM 17 N3 U B 27 67.515 11.784 102.526 1.00 75.04 N
ATOM 18 C4 U B 27 67.079 11.189 101.361 1.00 75.61 C
ATOM 19 O4 U B 27 67.043 9.956 101.287 1.00 76.20 O
ATOM 20 C5 U B 27 66.696 12.109 100.327 1.00 74.37 C
ATOM 21 C6 U B 27 66.772 13.427 100.547 1.00 73.53 C
ATOM 22 P C B 28 71.568 17.154 100.222 1.00 70.79 P
ATOM 23 OP1 C B 28 71.916 18.499 99.717 1.00 71.07 O
ATOM 24 OP2 C B 28 71.337 16.048 99.256 1.00 70.66 O
ATOM 25 O5' C B 28 72.690 16.722 101.265 1.00 72.87 O
TER

Atoms:
OP1: (67.050,17.868,116.130)
OP2: (66.578,16.130,114.297)
C3': (68.952,19.700,111.211)
C1': (70.838,18.805,110.109)
C5': (68.657,17.592,112.651)
O4': (70.523,17.954,111.197)
C8: (70.820,18.465,107.591)
O2': (70.968,21.024,111.053)
C6: (68.606,15.826,106.960)
C5: (69.456,16.854,107.372)
C4: (69.547,17.094,108.734)
P: (67.513,17.081,114.959)
C4': (69.591,18.624,112.080)
C2': (70.122,20.139,110.349)
C2: (68.128,15.486,109.202)
N1: (67.937,15.144,107.916)
N3: (68.904,16.437,109.714)
N6: (68.427,15.491,105.681)
N7: (70.268,17.723,106.662)
N9: (70.422,18.146,108.869)
O5': (68.038,18.087,113.844)
O3': (68.419,20.799,111.949)
C4: (67.079,11.189,101.361)
N3: (67.515,11.784,102.526)
OP1: (66.736,16.967,95.711)
OP2: (66.584,14.955,97.302)
C2: (67.615,13.130,102.786)
C1': (67.264,15.423,101.962)
C3': (69.237,16.340,101.061)
O5': (66.991,17.251,98.198)
O4': (66.933,16.078,100.741)
C5': (68.196,16.837,98.825)
P: (66.338,16.392,97.030)
C4': (68.046,16.906,100.319)
C2': (68.637,15.948,102.402)
O2': (68.474,17.033,103.291)
N1: (67.212,13.963,101.743)
O4: (67.043,9.956,101.287)
O2: (68.037,13.551,103.854)
C6: (66.772,13.427,100.547)
C5: (66.696,12.109,100.327)
O3': (70.265,17.309,101.141)
Image (generated by PyMOL):
PyMOL image
show in jmol