Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1708:A1704
Extra
PDB:
ATOM 1 O3' C A1707 -8.470 120.735 156.183 1.00 4.88 O
ATOM 2 P A A1708 -8.089 121.122 154.669 1.00 14.88 P
ATOM 3 OP1 A A1708 -7.293 119.995 154.122 1.00 28.26 O
ATOM 4 OP2 A A1708 -7.502 122.498 154.676 1.00 28.26 O
ATOM 5 O5' A A1708 -9.505 121.174 153.941 1.00 2.72 O
ATOM 6 C5' A A1708 -10.315 119.983 153.829 1.00 2.72 C
ATOM 7 C4' A A1708 -11.100 119.982 152.537 1.00 2.72 C
ATOM 8 O4' A A1708 -12.135 120.982 152.582 1.00 2.72 O
ATOM 9 C3' A A1708 -10.292 120.269 151.292 1.00 2.72 C
ATOM 10 O3' A A1708 -9.839 119.028 150.782 1.00 2.72 O
ATOM 11 C2' A A1708 -11.333 120.862 150.353 1.00 2.72 C
ATOM 12 O2' A A1708 -12.088 119.876 149.692 1.00 2.72 O
ATOM 13 C1' A A1708 -12.290 121.563 151.314 1.00 2.72 C
ATOM 14 N9 A A1708 -12.080 122.994 151.471 1.00 13.10 N
ATOM 15 C8 A A1708 -10.901 123.691 151.489 1.00 13.10 C
ATOM 16 N7 A A1708 -11.049 124.964 151.754 1.00 13.10 N
ATOM 17 C5 A A1708 -12.419 125.115 151.892 1.00 13.10 C
ATOM 18 C6 A A1708 -13.218 126.220 152.182 1.00 13.10 C
ATOM 19 N6 A A1708 -12.740 127.437 152.428 1.00 13.10 N
ATOM 20 N1 A A1708 -14.547 126.035 152.224 1.00 13.10 N
ATOM 21 C2 A A1708 -15.028 124.816 152.001 1.00 13.10 C
ATOM 22 N3 A A1708 -14.380 123.697 151.739 1.00 13.10 N
ATOM 23 C4 A A1708 -13.063 123.917 151.695 1.00 13.10 C
ATOM 24 P A A1709 -8.269 118.704 150.690 1.00 12.65 P
ATOM 25 OP1 A A1709 -8.179 117.234 150.858 1.00 21.61 O
ATOM 26 OP2 A A1709 -7.480 119.597 151.586 1.00 21.61 O
ATOM 27 O5' A A1709 -7.882 119.056 149.179 1.00 0.79 O
TER
ATOM 1 O3' U B1703 -4.644 128.887 147.813 1.00 0.79 O
ATOM 2 P U B1704 -3.900 128.685 149.218 1.00 7.88 P
ATOM 3 OP1 U B1704 -3.258 129.957 149.583 1.00 12.07 O
ATOM 4 OP2 U B1704 -3.095 127.429 149.209 1.00 12.07 O
ATOM 5 O5' U B1704 -5.087 128.531 150.244 1.00 3.49 O
ATOM 6 C5' U B1704 -5.852 129.655 150.588 1.00 3.49 C
ATOM 7 C4' U B1704 -7.220 129.217 151.000 1.00 3.49 C
ATOM 8 O4' U B1704 -7.899 128.608 149.890 1.00 3.49 O
ATOM 9 C3' U B1704 -7.305 128.110 152.040 1.00 3.49 C
ATOM 10 O3' U B1704 -7.202 128.622 153.340 1.00 3.49 O
ATOM 11 C2' U B1704 -8.718 127.579 151.865 1.00 3.49 C
ATOM 12 O2' U B1704 -9.652 128.281 152.649 1.00 3.49 O
ATOM 13 C1' U B1704 -8.996 127.911 150.408 1.00 3.49 C
ATOM 14 N1 U B1704 -9.296 126.744 149.593 1.00 12.53 N
ATOM 15 C2 U B1704 -10.617 126.571 149.308 1.00 12.53 C
ATOM 16 O2 U B1704 -11.464 127.354 149.679 1.00 12.53 O
ATOM 17 N3 U B1704 -10.921 125.463 148.575 1.00 12.53 N
ATOM 18 C4 U B1704 -10.046 124.545 148.100 1.00 12.53 C
ATOM 19 O4 U B1704 -10.480 123.589 147.467 1.00 12.53 O
ATOM 20 C5 U B1704 -8.675 124.802 148.423 1.00 12.53 C
ATOM 21 C6 U B1704 -8.354 125.870 149.148 1.00 12.53 C
ATOM 22 P A B1705 -6.381 127.818 154.443 1.00 14.96 P
ATOM 23 OP1 A B1705 -6.105 126.437 153.955 1.00 51.75 O
ATOM 24 OP2 A B1705 -7.169 128.029 155.694 1.00 51.75 O
ATOM 25 O5' A B1705 -5.006 128.623 154.531 1.00 17.10 O
TER
ATOM 2 P A A1708 -8.089 121.122 154.669 1.00 14.88 P
ATOM 3 OP1 A A1708 -7.293 119.995 154.122 1.00 28.26 O
ATOM 4 OP2 A A1708 -7.502 122.498 154.676 1.00 28.26 O
ATOM 5 O5' A A1708 -9.505 121.174 153.941 1.00 2.72 O
ATOM 6 C5' A A1708 -10.315 119.983 153.829 1.00 2.72 C
ATOM 7 C4' A A1708 -11.100 119.982 152.537 1.00 2.72 C
ATOM 8 O4' A A1708 -12.135 120.982 152.582 1.00 2.72 O
ATOM 9 C3' A A1708 -10.292 120.269 151.292 1.00 2.72 C
ATOM 10 O3' A A1708 -9.839 119.028 150.782 1.00 2.72 O
ATOM 11 C2' A A1708 -11.333 120.862 150.353 1.00 2.72 C
ATOM 12 O2' A A1708 -12.088 119.876 149.692 1.00 2.72 O
ATOM 13 C1' A A1708 -12.290 121.563 151.314 1.00 2.72 C
ATOM 14 N9 A A1708 -12.080 122.994 151.471 1.00 13.10 N
ATOM 15 C8 A A1708 -10.901 123.691 151.489 1.00 13.10 C
ATOM 16 N7 A A1708 -11.049 124.964 151.754 1.00 13.10 N
ATOM 17 C5 A A1708 -12.419 125.115 151.892 1.00 13.10 C
ATOM 18 C6 A A1708 -13.218 126.220 152.182 1.00 13.10 C
ATOM 19 N6 A A1708 -12.740 127.437 152.428 1.00 13.10 N
ATOM 20 N1 A A1708 -14.547 126.035 152.224 1.00 13.10 N
ATOM 21 C2 A A1708 -15.028 124.816 152.001 1.00 13.10 C
ATOM 22 N3 A A1708 -14.380 123.697 151.739 1.00 13.10 N
ATOM 23 C4 A A1708 -13.063 123.917 151.695 1.00 13.10 C
ATOM 24 P A A1709 -8.269 118.704 150.690 1.00 12.65 P
ATOM 25 OP1 A A1709 -8.179 117.234 150.858 1.00 21.61 O
ATOM 26 OP2 A A1709 -7.480 119.597 151.586 1.00 21.61 O
ATOM 27 O5' A A1709 -7.882 119.056 149.179 1.00 0.79 O
TER
ATOM 1 O3' U B1703 -4.644 128.887 147.813 1.00 0.79 O
ATOM 2 P U B1704 -3.900 128.685 149.218 1.00 7.88 P
ATOM 3 OP1 U B1704 -3.258 129.957 149.583 1.00 12.07 O
ATOM 4 OP2 U B1704 -3.095 127.429 149.209 1.00 12.07 O
ATOM 5 O5' U B1704 -5.087 128.531 150.244 1.00 3.49 O
ATOM 6 C5' U B1704 -5.852 129.655 150.588 1.00 3.49 C
ATOM 7 C4' U B1704 -7.220 129.217 151.000 1.00 3.49 C
ATOM 8 O4' U B1704 -7.899 128.608 149.890 1.00 3.49 O
ATOM 9 C3' U B1704 -7.305 128.110 152.040 1.00 3.49 C
ATOM 10 O3' U B1704 -7.202 128.622 153.340 1.00 3.49 O
ATOM 11 C2' U B1704 -8.718 127.579 151.865 1.00 3.49 C
ATOM 12 O2' U B1704 -9.652 128.281 152.649 1.00 3.49 O
ATOM 13 C1' U B1704 -8.996 127.911 150.408 1.00 3.49 C
ATOM 14 N1 U B1704 -9.296 126.744 149.593 1.00 12.53 N
ATOM 15 C2 U B1704 -10.617 126.571 149.308 1.00 12.53 C
ATOM 16 O2 U B1704 -11.464 127.354 149.679 1.00 12.53 O
ATOM 17 N3 U B1704 -10.921 125.463 148.575 1.00 12.53 N
ATOM 18 C4 U B1704 -10.046 124.545 148.100 1.00 12.53 C
ATOM 19 O4 U B1704 -10.480 123.589 147.467 1.00 12.53 O
ATOM 20 C5 U B1704 -8.675 124.802 148.423 1.00 12.53 C
ATOM 21 C6 U B1704 -8.354 125.870 149.148 1.00 12.53 C
ATOM 22 P A B1705 -6.381 127.818 154.443 1.00 14.96 P
ATOM 23 OP1 A B1705 -6.105 126.437 153.955 1.00 51.75 O
ATOM 24 OP2 A B1705 -7.169 128.029 155.694 1.00 51.75 O
ATOM 25 O5' A B1705 -5.006 128.623 154.531 1.00 17.10 O
TER
Atoms:
OP1: (-7.293,119.995,154.122)
OP2: (-7.502,122.498,154.676)
C3': (-10.292,120.269,151.292)
C1': (-12.290,121.563,151.314)
C5': (-10.315,119.983,153.829)
O4': (-12.135,120.982,152.582)
C8: (-10.901,123.691,151.489)
O2': (-12.088,119.876,149.692)
C6: (-13.218,126.220,152.182)
C5: (-12.419,125.115,151.892)
C4: (-13.063,123.917,151.695)
P: (-8.089,121.122,154.669)
C4': (-11.100,119.982,152.537)
C2': (-11.333,120.862,150.353)
C2: (-15.028,124.816,152.001)
N1: (-14.547,126.035,152.224)
N3: (-14.380,123.697,151.739)
N6: (-12.740,127.437,152.428)
N7: (-11.049,124.964,151.754)
N9: (-12.080,122.994,151.471)
O5': (-9.505,121.174,153.941)
O3': (-9.839,119.028,150.782)
OP2: (-7.502,122.498,154.676)
C3': (-10.292,120.269,151.292)
C1': (-12.290,121.563,151.314)
C5': (-10.315,119.983,153.829)
O4': (-12.135,120.982,152.582)
C8: (-10.901,123.691,151.489)
O2': (-12.088,119.876,149.692)
C6: (-13.218,126.220,152.182)
C5: (-12.419,125.115,151.892)
C4: (-13.063,123.917,151.695)
P: (-8.089,121.122,154.669)
C4': (-11.100,119.982,152.537)
C2': (-11.333,120.862,150.353)
C2: (-15.028,124.816,152.001)
N1: (-14.547,126.035,152.224)
N3: (-14.380,123.697,151.739)
N6: (-12.740,127.437,152.428)
N7: (-11.049,124.964,151.754)
N9: (-12.080,122.994,151.471)
O5': (-9.505,121.174,153.941)
O3': (-9.839,119.028,150.782)
C4: (-10.046,124.545,148.100)
N3: (-10.921,125.463,148.575)
OP1: (-3.258,129.957,149.583)
OP2: (-3.095,127.429,149.209)
C2: (-10.617,126.571,149.308)
C1': (-8.996,127.911,150.408)
C3': (-7.305,128.110,152.040)
O5': (-5.087,128.531,150.244)
O4': (-7.899,128.608,149.890)
C5': (-5.852,129.655,150.588)
P: (-3.900,128.685,149.218)
C4': (-7.220,129.217,151.000)
C2': (-8.718,127.579,151.865)
O2': (-9.652,128.281,152.649)
N1: (-9.296,126.744,149.593)
O4: (-10.480,123.589,147.467)
O2: (-11.464,127.354,149.679)
C6: (-8.354,125.870,149.148)
C5: (-8.675,124.802,148.423)
O3': (-7.202,128.622,153.340)
N3: (-10.921,125.463,148.575)
OP1: (-3.258,129.957,149.583)
OP2: (-3.095,127.429,149.209)
C2: (-10.617,126.571,149.308)
C1': (-8.996,127.911,150.408)
C3': (-7.305,128.110,152.040)
O5': (-5.087,128.531,150.244)
O4': (-7.899,128.608,149.890)
C5': (-5.852,129.655,150.588)
P: (-3.900,128.685,149.218)
C4': (-7.220,129.217,151.000)
C2': (-8.718,127.579,151.865)
O2': (-9.652,128.281,152.649)
N1: (-9.296,126.744,149.593)
O4: (-10.480,123.589,147.467)
O2: (-11.464,127.354,149.679)
C6: (-8.354,125.870,149.148)
C5: (-8.675,124.802,148.423)
O3': (-7.202,128.622,153.340)
Image (generated by PyMOL):