ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61335:61334

Extra

PDB:
ATOM 1 O3' U A1334 290.930 -64.186 259.289 1.00107.92 O
ATOM 2 P A A1335 292.283 -63.325 259.090 1.00113.47 P
ATOM 3 OP1 A A1335 292.121 -62.556 257.825 1.00113.41 O
ATOM 4 OP2 A A1335 293.429 -64.266 259.217 1.00114.51 O
ATOM 5 O5' A A1335 292.267 -62.325 260.332 1.00113.07 O
ATOM 6 C5' A A1335 291.625 -61.070 260.236 1.00112.37 C
ATOM 7 C4' A A1335 292.590 -59.926 260.388 1.00112.86 C
ATOM 8 O4' A A1335 292.150 -58.833 259.538 1.00112.45 O
ATOM 9 C3' A A1335 292.670 -59.320 261.794 1.00112.63 C
ATOM 10 O3' A A1335 293.662 -59.924 262.615 1.00113.37 O
ATOM 11 C2' A A1335 292.899 -57.833 261.533 1.00112.58 C
ATOM 12 O2' A A1335 294.262 -57.574 261.211 1.00113.61 O
ATOM 13 C1' A A1335 292.069 -57.637 260.279 1.00112.08 C
ATOM 14 N9 A A1335 290.652 -57.405 260.597 1.00110.98 N
ATOM 15 C8 A A1335 289.599 -58.202 260.226 1.00110.41 C
ATOM 16 N7 A A1335 288.436 -57.773 260.629 1.00109.49 N
ATOM 17 C5 A A1335 288.737 -56.602 261.315 1.00109.43 C
ATOM 18 C6 A A1335 287.930 -55.659 261.990 1.00108.67 C
ATOM 19 N6 A A1335 286.607 -55.724 262.102 1.00107.79 N
ATOM 20 N1 A A1335 288.554 -54.611 262.560 1.00108.88 N
ATOM 21 C2 A A1335 289.894 -54.518 262.455 1.00109.80 C
ATOM 22 N3 A A1335 290.766 -55.333 261.862 1.00110.59 N
ATOM 23 C4 A A1335 290.110 -56.367 261.302 1.00110.34 C
ATOM 24 P C A1336 293.326 -60.298 264.150 1.00104.78 P
ATOM 25 OP1 C A1336 294.431 -61.165 264.632 1.00105.70 O
ATOM 26 OP2 C A1336 291.945 -60.827 264.180 1.00103.84 O
ATOM 27 O5' C A1336 293.376 -58.886 264.895 1.00104.52 O
TER

ATOM 1 O3' C B1333 286.955 -59.587 258.134 1.00 84.63 O
ATOM 2 P U B1334 287.669 -60.963 257.781 1.00105.23 P
ATOM 3 OP1 U B1334 289.114 -60.726 257.862 1.00106.17 O
ATOM 4 OP2 U B1334 287.099 -61.436 256.507 1.00105.14 O
ATOM 5 O5' U B1334 287.210 -61.917 258.960 1.00104.92 O
ATOM 6 C5' U B1334 288.005 -62.079 260.137 1.00105.32 C
ATOM 7 C4' U B1334 288.813 -63.378 260.136 1.00106.12 C
ATOM 8 O4' U B1334 287.926 -64.531 260.275 1.00105.72 O
ATOM 9 C3' U B1334 289.666 -63.637 258.892 1.00106.97 C
ATOM 10 O3' U B1334 290.930 -64.186 259.289 1.00107.92 O
ATOM 11 C2' U B1334 288.839 -64.679 258.117 1.00106.73 C
ATOM 12 O2' U B1334 289.575 -65.502 257.233 1.00107.58 O
ATOM 13 C1' U B1334 288.201 -65.475 259.250 1.00106.26 C
ATOM 14 N1 U B1334 286.927 -66.153 258.883 1.00105.60 N
ATOM 15 C2 U B1334 285.847 -65.414 258.362 1.00104.82 C
ATOM 16 O2 U B1334 285.820 -64.203 258.136 1.00104.59 O
ATOM 17 N3 U B1334 284.712 -66.143 258.079 1.00104.29 N
ATOM 18 C4 U B1334 284.514 -67.494 258.238 1.00104.43 C
ATOM 19 O4 U B1334 283.406 -67.954 257.904 1.00103.90 O
ATOM 20 C5 U B1334 285.670 -68.186 258.775 1.00105.23 C
ATOM 21 C6 U B1334 286.797 -67.518 259.075 1.00105.78 C
ATOM 22 P A B1335 292.283 -63.325 259.090 1.00113.47 P
ATOM 23 OP1 A B1335 292.121 -62.556 257.825 1.00113.41 O
ATOM 24 OP2 A B1335 293.429 -64.266 259.217 1.00114.51 O
ATOM 25 O5' A B1335 292.267 -62.325 260.332 1.00113.07 O
TER

Atoms:
OP1: (292.121,-62.556,257.825)
OP2: (293.429,-64.266,259.217)
C3': (292.670,-59.320,261.794)
C1': (292.069,-57.637,260.279)
C5': (291.625,-61.070,260.236)
O4': (292.150,-58.833,259.538)
C8: (289.599,-58.202,260.226)
O2': (294.262,-57.574,261.211)
C6: (287.930,-55.659,261.990)
C5: (288.737,-56.602,261.315)
C4: (290.110,-56.367,261.302)
P: (292.283,-63.325,259.090)
C4': (292.590,-59.926,260.388)
C2': (292.899,-57.833,261.533)
C2: (289.894,-54.518,262.455)
N1: (288.554,-54.611,262.560)
N3: (290.766,-55.333,261.862)
N6: (286.607,-55.724,262.102)
N7: (288.436,-57.773,260.629)
N9: (290.652,-57.405,260.597)
O5': (292.267,-62.325,260.332)
O3': (293.662,-59.924,262.615)
C4: (284.514,-67.494,258.238)
N3: (284.712,-66.143,258.079)
OP1: (289.114,-60.726,257.862)
OP2: (287.099,-61.436,256.507)
C2: (285.847,-65.414,258.362)
C1': (288.201,-65.475,259.250)
C3': (289.666,-63.637,258.892)
O5': (287.210,-61.917,258.960)
O4': (287.926,-64.531,260.275)
C5': (288.005,-62.079,260.137)
P: (287.669,-60.963,257.781)
C4': (288.813,-63.378,260.136)
C2': (288.839,-64.679,258.117)
O2': (289.575,-65.502,257.233)
N1: (286.927,-66.153,258.883)
O4: (283.406,-67.954,257.904)
O2: (285.820,-64.203,258.136)
C6: (286.797,-67.518,259.075)
C5: (285.670,-68.186,258.775)
O3': (290.930,-64.186,259.289)
Image (generated by PyMOL):
PyMOL image
show in jmol