ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A837:A835

Extra

PDB:
ATOM 1 O3' A A 836 165.522 120.616 -16.125 1.00 33.02 O
ATOM 2 P A A 837 165.060 121.842 -17.074 1.00 34.41 P
ATOM 3 OP1 A A 837 164.763 122.949 -16.126 1.00 37.41 O
ATOM 4 OP2 A A 837 164.034 121.420 -18.048 1.00 32.39 O
ATOM 5 O5' A A 837 166.384 122.254 -17.862 1.00 34.50 O
ATOM 6 C5' A A 837 167.576 122.609 -17.139 1.00 34.76 C
ATOM 7 C4' A A 837 168.778 121.896 -17.713 1.00 35.09 C
ATOM 8 O4' A A 837 168.531 120.463 -17.728 1.00 35.54 O
ATOM 9 C3' A A 837 169.132 122.237 -19.152 1.00 34.52 C
ATOM 10 O3' A A 837 169.923 123.406 -19.215 1.00 32.85 O
ATOM 11 C2' A A 837 169.902 120.998 -19.590 1.00 35.32 C
ATOM 12 O2' A A 837 171.219 121.011 -19.079 1.00 35.03 O
ATOM 13 C1' A A 837 169.130 119.886 -18.875 1.00 36.04 C
ATOM 14 N9 A A 837 168.073 119.321 -19.720 1.00 36.44 N
ATOM 15 C8 A A 837 166.772 119.742 -19.849 1.00 36.89 C
ATOM 16 N7 A A 837 166.071 119.047 -20.712 1.00 36.43 N
ATOM 17 C5 A A 837 166.967 118.098 -21.179 1.00 36.31 C
ATOM 18 C6 A A 837 166.837 117.051 -22.109 1.00 35.05 C
ATOM 19 N6 A A 837 165.715 116.779 -22.771 1.00 32.27 N
ATOM 20 N1 A A 837 167.917 116.282 -22.339 1.00 34.59 N
ATOM 21 C2 A A 837 169.048 116.555 -21.680 1.00 36.15 C
ATOM 22 N3 A A 837 169.299 117.509 -20.786 1.00 36.10 N
ATOM 23 C4 A A 837 168.203 118.253 -20.575 1.00 36.30 C
ATOM 24 P C A 838 169.764 124.413 -20.462 1.00 33.28 P
ATOM 25 OP1 C A 838 170.566 125.635 -20.104 1.00 32.66 O
ATOM 26 OP2 C A 838 168.330 124.539 -20.815 1.00 32.67 O
ATOM 27 O5' C A 838 170.502 123.668 -21.666 1.00 33.49 O
TER

ATOM 1 O3' C B 834 156.417 120.777 -20.953 1.00 33.94 O
ATOM 2 P U B 835 157.143 120.438 -19.574 1.00 34.99 P
ATOM 3 OP1 U B 835 156.558 119.177 -19.037 1.00 33.01 O
ATOM 4 OP2 U B 835 157.132 121.665 -18.753 1.00 35.65 O
ATOM 5 O5' U B 835 158.641 120.140 -20.020 1.00 35.97 O
ATOM 6 C5' U B 835 158.945 119.039 -20.889 1.00 33.66 C
ATOM 7 C4' U B 835 160.431 118.929 -21.108 1.00 32.83 C
ATOM 8 O4' U B 835 160.909 119.980 -21.982 1.00 33.78 O
ATOM 9 C3' U B 835 161.294 119.040 -19.871 1.00 32.24 C
ATOM 10 O3' U B 835 161.347 117.820 -19.200 1.00 29.95 O
ATOM 11 C2' U B 835 162.649 119.444 -20.442 1.00 33.68 C
ATOM 12 O2' U B 835 163.396 118.344 -20.910 1.00 35.47 O
ATOM 13 C1' U B 835 162.248 120.302 -21.641 1.00 35.55 C
ATOM 14 N1 U B 835 162.337 121.742 -21.363 1.00 40.19 N
ATOM 15 C2 U B 835 163.346 122.476 -21.982 1.00 42.39 C
ATOM 16 O2 U B 835 164.129 122.001 -22.781 1.00 43.43 O
ATOM 17 N3 U B 835 163.384 123.801 -21.641 1.00 45.31 N
ATOM 18 C4 U B 835 162.514 124.465 -20.794 1.00 45.83 C
ATOM 19 O4 U B 835 162.603 125.687 -20.670 1.00 48.18 O
ATOM 20 C5 U B 835 161.500 123.644 -20.218 1.00 44.20 C
ATOM 21 C6 U B 835 161.449 122.348 -20.510 1.00 41.53 C
ATOM 22 P A B 836 161.322 117.802 -17.602 1.00 30.33 P
ATOM 23 OP1 A B 836 161.358 116.384 -17.164 1.00 30.42 O
ATOM 24 OP2 A B 836 160.234 118.691 -17.155 1.00 33.34 O
ATOM 25 O5' A B 836 162.668 118.447 -17.182 1.00 29.37 O
TER

Atoms:
OP1: (164.763,122.949,-16.126)
OP2: (164.034,121.420,-18.048)
C3': (169.132,122.237,-19.152)
C1': (169.130,119.886,-18.875)
C5': (167.576,122.609,-17.139)
O4': (168.531,120.463,-17.728)
C8: (166.772,119.742,-19.849)
O2': (171.219,121.011,-19.079)
C6: (166.837,117.051,-22.109)
C5: (166.967,118.098,-21.179)
C4: (168.203,118.253,-20.575)
P: (165.060,121.842,-17.074)
C4': (168.778,121.896,-17.713)
C2': (169.902,120.998,-19.590)
C2: (169.048,116.555,-21.680)
N1: (167.917,116.282,-22.339)
N3: (169.299,117.509,-20.786)
N6: (165.715,116.779,-22.771)
N7: (166.071,119.047,-20.712)
N9: (168.073,119.321,-19.720)
O5': (166.384,122.254,-17.862)
O3': (169.923,123.406,-19.215)
C4: (162.514,124.465,-20.794)
N3: (163.384,123.801,-21.641)
OP1: (156.558,119.177,-19.037)
OP2: (157.132,121.665,-18.753)
C2: (163.346,122.476,-21.982)
C1': (162.248,120.302,-21.641)
C3': (161.294,119.040,-19.871)
O5': (158.641,120.140,-20.020)
O4': (160.909,119.980,-21.982)
C5': (158.945,119.039,-20.889)
P: (157.143,120.438,-19.574)
C4': (160.431,118.929,-21.108)
C2': (162.649,119.444,-20.442)
O2': (163.396,118.344,-20.910)
N1: (162.337,121.742,-21.363)
O4: (162.603,125.687,-20.670)
O2: (164.129,122.001,-22.781)
C6: (161.449,122.348,-20.510)
C5: (161.500,123.644,-20.218)
O3': (161.347,117.820,-19.200)
Image (generated by PyMOL):
PyMOL image
show in jmol