ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCE:01237:01235

Extra

PDB:
ATOM 1 O3' C A1236 10.152 86.908 58.798 1.00 55.38 O
ATOM 2 P A A1237 10.142 86.841 60.395 1.00 56.08 P
ATOM 3 OP1 A A1237 11.297 86.015 60.807 1.00 56.23 O
ATOM 4 OP2 A A1237 8.780 86.481 60.852 1.00 57.71 O
ATOM 5 O5' A A1237 10.425 88.342 60.832 1.00 60.52 O
ATOM 6 C5' A A1237 11.724 88.929 60.648 1.00 65.27 C
ATOM 7 C4' A A1237 11.674 90.389 60.994 1.00 67.50 C
ATOM 8 O4' A A1237 10.754 91.047 60.092 1.00 67.47 O
ATOM 9 C3' A A1237 11.124 90.673 62.378 1.00 70.36 C
ATOM 10 O3' A A1237 12.157 90.588 63.349 1.00 76.64 O
ATOM 11 C2' A A1237 10.569 92.082 62.228 1.00 68.74 C
ATOM 12 O2' A A1237 11.569 93.075 62.325 1.00 68.30 O
ATOM 13 C1' A A1237 10.029 92.039 60.795 1.00 68.31 C
ATOM 14 N9 A A1237 8.615 91.695 60.710 1.00 67.68 N
ATOM 15 C8 A A1237 8.051 90.448 60.769 1.00 67.92 C
ATOM 16 N7 A A1237 6.746 90.455 60.673 1.00 68.18 N
ATOM 17 C5 A A1237 6.430 91.798 60.538 1.00 68.55 C
ATOM 18 C6 A A1237 5.205 92.471 60.400 1.00 69.68 C
ATOM 19 N6 A A1237 4.021 91.856 60.377 1.00 69.46 N
ATOM 20 N1 A A1237 5.238 93.817 60.289 1.00 70.42 N
ATOM 21 C2 A A1237 6.427 94.432 60.319 1.00 70.28 C
ATOM 22 N3 A A1237 7.644 93.908 60.447 1.00 69.22 N
ATOM 23 C4 A A1237 7.573 92.571 60.554 1.00 68.28 C
ATOM 24 P U A1238 11.937 89.719 64.684 1.00 82.27 P
ATOM 25 OP1 U A1238 12.063 88.286 64.302 1.00 80.53 O
ATOM 26 OP2 U A1238 10.696 90.195 65.356 1.00 81.04 O
ATOM 27 O5' U A1238 13.195 90.108 65.590 1.00 86.92 O
TER

ATOM 1 O3' C B1234 2.482 82.384 63.358 1.00 49.44 O
ATOM 2 P U B1235 3.394 82.278 62.048 1.00 53.29 P
ATOM 3 OP1 U B1235 2.520 81.940 60.898 1.00 52.07 O
ATOM 4 OP2 U B1235 4.546 81.401 62.375 1.00 52.83 O
ATOM 5 O5' U B1235 3.928 83.767 61.857 1.00 54.10 O
ATOM 6 C5' U B1235 3.006 84.845 61.617 1.00 56.20 C
ATOM 7 C4' U B1235 3.747 86.140 61.379 1.00 56.69 C
ATOM 8 O4' U B1235 4.334 86.624 62.616 1.00 57.97 O
ATOM 9 C3' U B1235 4.923 86.092 60.418 1.00 56.39 C
ATOM 10 O3' U B1235 4.513 86.113 59.060 1.00 55.96 O
ATOM 11 C2' U B1235 5.661 87.364 60.794 1.00 57.68 C
ATOM 12 O2' U B1235 5.002 88.501 60.271 1.00 57.28 O
ATOM 13 C1' U B1235 5.525 87.342 62.322 1.00 58.15 C
ATOM 14 N1 U B1235 6.653 86.643 62.957 1.00 58.22 N
ATOM 15 C2 U B1235 7.665 87.406 63.522 1.00 57.87 C
ATOM 16 O2 U B1235 7.647 88.628 63.543 1.00 56.35 O
ATOM 17 N3 U B1235 8.700 86.682 64.061 1.00 58.13 N
ATOM 18 C4 U B1235 8.821 85.303 64.100 1.00 58.13 C
ATOM 19 O4 U B1235 9.821 84.790 64.610 1.00 57.38 O
ATOM 20 C5 U B1235 7.729 84.595 63.510 1.00 57.60 C
ATOM 21 C6 U B1235 6.710 85.270 62.975 1.00 57.83 C
ATOM 22 P C B1236 5.374 85.320 57.962 1.00 55.81 P
ATOM 23 OP1 C B1236 4.566 85.231 56.717 1.00 55.13 O
ATOM 24 OP2 C B1236 5.888 84.084 58.586 1.00 56.60 O
ATOM 25 O5' C B1236 6.611 86.279 57.695 1.00 55.28 O
TER

Atoms:
OP1: (11.297,86.015,60.807)
OP2: (8.780,86.481,60.852)
C3': (11.124,90.673,62.378)
C1': (10.029,92.039,60.795)
C5': (11.724,88.929,60.648)
O4': (10.754,91.047,60.092)
C8: (8.051,90.448,60.769)
O2': (11.569,93.075,62.325)
C6: (5.205,92.471,60.400)
C5: (6.430,91.798,60.538)
C4: (7.573,92.571,60.554)
P: (10.142,86.841,60.395)
C4': (11.674,90.389,60.994)
C2': (10.569,92.082,62.228)
C2: (6.427,94.432,60.319)
N1: (5.238,93.817,60.289)
N3: (7.644,93.908,60.447)
N6: (4.021,91.856,60.377)
N7: (6.746,90.455,60.673)
N9: (8.615,91.695,60.710)
O5': (10.425,88.342,60.832)
O3': (12.157,90.588,63.349)
C4: (8.821,85.303,64.100)
N3: (8.700,86.682,64.061)
OP1: (2.520,81.940,60.898)
OP2: (4.546,81.401,62.375)
C2: (7.665,87.406,63.522)
C1': (5.525,87.342,62.322)
C3': (4.923,86.092,60.418)
O5': (3.928,83.767,61.857)
O4': (4.334,86.624,62.616)
C5': (3.006,84.845,61.617)
P: (3.394,82.278,62.048)
C4': (3.747,86.140,61.379)
C2': (5.661,87.364,60.794)
O2': (5.002,88.501,60.271)
N1: (6.653,86.643,62.957)
O4: (9.821,84.790,64.610)
O2: (7.647,88.628,63.543)
C6: (6.710,85.270,62.975)
C5: (7.729,84.595,63.510)
O3': (4.513,86.113,59.060)
Image (generated by PyMOL):
PyMOL image
show in jmol