ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCL:0243:0241

Extra

PDB:
ATOM 1 O3' C A 242 78.790 141.888 -5.176 1.00 91.22 O
ATOM 2 P A A 243 80.164 141.060 -5.246 1.00 92.83 P
ATOM 3 OP1 A A 243 79.886 139.756 -5.911 1.00 91.17 O
ATOM 4 OP2 A A 243 80.755 141.083 -3.878 1.00 91.95 O
ATOM 5 O5' A A 243 81.096 141.937 -6.202 1.00 92.87 O
ATOM 6 C5' A A 243 80.789 142.108 -7.607 1.00 91.95 C
ATOM 7 C4' A A 243 81.724 143.126 -8.230 1.00 90.61 C
ATOM 8 O4' A A 243 81.557 144.397 -7.554 1.00 90.13 O
ATOM 9 C3' A A 243 83.213 142.833 -8.110 1.00 90.35 C
ATOM 10 O3' A A 243 83.666 141.983 -9.157 1.00 90.86 O
ATOM 11 C2' A A 243 83.828 144.217 -8.233 1.00 90.26 C
ATOM 12 O2' A A 243 83.883 144.648 -9.574 1.00 90.67 O
ATOM 13 C1' A A 243 82.803 145.069 -7.484 1.00 90.63 C
ATOM 14 N9 A A 243 83.140 145.275 -6.076 1.00 91.11 N
ATOM 15 C8 A A 243 82.664 144.598 -4.981 1.00 91.73 C
ATOM 16 N7 A A 243 83.148 145.030 -3.842 1.00 91.42 N
ATOM 17 C5 A A 243 84.002 146.058 -4.212 1.00 91.49 C
ATOM 18 C6 A A 243 84.823 146.921 -3.465 1.00 91.94 C
ATOM 19 N6 A A 243 84.914 146.892 -2.135 1.00 92.29 N
ATOM 20 N1 A A 243 85.556 147.830 -4.141 1.00 92.02 N
ATOM 21 C2 A A 243 85.462 147.863 -5.475 1.00 92.13 C
ATOM 22 N3 A A 243 84.726 147.108 -6.287 1.00 92.03 N
ATOM 23 C4 A A 243 84.012 146.215 -5.585 1.00 91.37 C
ATOM 24 P C A 244 85.102 141.266 -9.042 1.00 92.58 P
ATOM 25 OP1 C A 244 85.421 140.708 -10.381 1.00 91.80 O
ATOM 26 OP2 C A 244 85.094 140.367 -7.856 1.00 92.75 O
ATOM 27 O5' C A 244 86.123 142.454 -8.758 1.00 90.31 O
TER

ATOM 1 O3' C B 240 81.179 139.547 4.140 1.00 66.05 O
ATOM 2 P U B 241 79.997 140.154 3.241 1.00 69.29 P
ATOM 3 OP1 U B 241 79.227 141.093 4.100 1.00 68.54 O
ATOM 4 OP2 U B 241 79.291 139.050 2.545 1.00 67.30 O
ATOM 5 O5' U B 241 80.773 141.006 2.144 1.00 72.71 O
ATOM 6 C5' U B 241 81.471 142.210 2.505 1.00 74.28 C
ATOM 7 C4' U B 241 82.036 142.868 1.273 1.00 76.20 C
ATOM 8 O4' U B 241 83.093 142.041 0.723 1.00 76.36 O
ATOM 9 C3' U B 241 81.080 143.019 0.102 1.00 78.21 C
ATOM 10 O3' U B 241 80.179 144.108 0.243 1.00 81.25 O
ATOM 11 C2' U B 241 82.045 143.217 -1.055 1.00 78.52 C
ATOM 12 O2' U B 241 82.590 144.522 -1.082 1.00 79.44 O
ATOM 13 C1' U B 241 83.146 142.222 -0.686 1.00 78.08 C
ATOM 14 N1 U B 241 82.953 140.920 -1.338 1.00 77.75 N
ATOM 15 C2 U B 241 83.830 140.572 -2.348 1.00 77.22 C
ATOM 16 O2 U B 241 84.747 141.291 -2.706 1.00 75.86 O
ATOM 17 N3 U B 241 83.591 139.351 -2.926 1.00 77.49 N
ATOM 18 C4 U B 241 82.583 138.465 -2.609 1.00 76.80 C
ATOM 19 O4 U B 241 82.469 137.422 -3.252 1.00 76.12 O
ATOM 20 C5 U B 241 81.722 138.898 -1.554 1.00 77.50 C
ATOM 21 C6 U B 241 81.933 140.080 -0.967 1.00 77.65 C
ATOM 22 P C B 242 78.641 143.914 -0.184 1.00 83.95 P
ATOM 23 OP1 C B 242 77.998 145.250 -0.126 1.00 83.72 O
ATOM 24 OP2 C B 242 78.081 142.793 0.617 1.00 83.53 O
ATOM 25 O5' C B 242 78.714 143.459 -1.712 1.00 84.52 O
TER

Atoms:
OP1: (79.886,139.756,-5.911)
OP2: (80.755,141.083,-3.878)
C3': (83.213,142.833,-8.110)
C1': (82.803,145.069,-7.484)
C5': (80.789,142.108,-7.607)
O4': (81.557,144.397,-7.554)
C8: (82.664,144.598,-4.981)
O2': (83.883,144.648,-9.574)
C6: (84.823,146.921,-3.465)
C5: (84.002,146.058,-4.212)
C4: (84.012,146.215,-5.585)
P: (80.164,141.060,-5.246)
C4': (81.724,143.126,-8.230)
C2': (83.828,144.217,-8.233)
C2: (85.462,147.863,-5.475)
N1: (85.556,147.830,-4.141)
N3: (84.726,147.108,-6.287)
N6: (84.914,146.892,-2.135)
N7: (83.148,145.030,-3.842)
N9: (83.140,145.275,-6.076)
O5': (81.096,141.937,-6.202)
O3': (83.666,141.983,-9.157)
C4: (82.583,138.465,-2.609)
N3: (83.591,139.351,-2.926)
OP1: (79.227,141.093,4.100)
OP2: (79.291,139.050,2.545)
C2: (83.830,140.572,-2.348)
C1': (83.146,142.222,-0.686)
C3': (81.080,143.019,0.102)
O5': (80.773,141.006,2.144)
O4': (83.093,142.041,0.723)
C5': (81.471,142.210,2.505)
P: (79.997,140.154,3.241)
C4': (82.036,142.868,1.273)
C2': (82.045,143.217,-1.055)
O2': (82.590,144.522,-1.082)
N1: (82.953,140.920,-1.338)
O4: (82.469,137.422,-3.252)
O2: (84.747,141.291,-2.706)
C6: (81.933,140.080,-0.967)
C5: (81.722,138.898,-1.554)
O3': (80.179,144.108,0.243)
Image (generated by PyMOL):
PyMOL image
show in jmol