ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCU:0243:0241

Extra

PDB:
ATOM 1 O3' C A 242 78.431 141.547 -5.225 1.00 79.49 O
ATOM 2 P A A 243 79.824 140.753 -5.310 1.00 80.86 P
ATOM 3 OP1 A A 243 79.571 139.444 -5.979 1.00 79.46 O
ATOM 4 OP2 A A 243 80.434 140.785 -3.950 1.00 80.48 O
ATOM 5 O5' A A 243 80.725 141.655 -6.271 1.00 81.05 O
ATOM 6 C5' A A 243 80.371 141.865 -7.659 1.00 80.15 C
ATOM 7 C4' A A 243 81.303 142.876 -8.288 1.00 78.87 C
ATOM 8 O4' A A 243 81.154 144.143 -7.600 1.00 78.76 O
ATOM 9 C3' A A 243 82.787 142.561 -8.176 1.00 78.64 C
ATOM 10 O3' A A 243 83.218 141.717 -9.235 1.00 78.60 O
ATOM 11 C2' A A 243 83.423 143.937 -8.282 1.00 78.85 C
ATOM 12 O2' A A 243 83.490 144.374 -9.621 1.00 79.96 O
ATOM 13 C1' A A 243 82.409 144.797 -7.526 1.00 79.09 C
ATOM 14 N9 A A 243 82.742 145.000 -6.115 1.00 78.66 N
ATOM 15 C8 A A 243 82.234 144.344 -5.022 1.00 78.99 C
ATOM 16 N7 A A 243 82.726 144.760 -3.881 1.00 78.47 N
ATOM 17 C5 A A 243 83.619 145.755 -4.246 1.00 78.74 C
ATOM 18 C6 A A 243 84.468 146.587 -3.495 1.00 79.17 C
ATOM 19 N6 A A 243 84.558 146.547 -2.166 1.00 79.85 N
ATOM 20 N1 A A 243 85.234 147.472 -4.165 1.00 79.20 N
ATOM 21 C2 A A 243 85.147 147.510 -5.499 1.00 79.64 C
ATOM 22 N3 A A 243 84.390 146.779 -6.317 1.00 79.83 N
ATOM 23 C4 A A 243 83.641 145.911 -5.619 1.00 79.01 C
ATOM 24 P C A 244 84.600 140.906 -9.101 1.00 80.18 P
ATOM 25 OP1 C A 244 84.846 140.256 -10.413 1.00 79.56 O
ATOM 26 OP2 C A 244 84.566 140.076 -7.867 1.00 80.60 O
ATOM 27 O5' C A 244 85.702 142.033 -8.886 1.00 77.75 O
TER

ATOM 1 O3' C B 240 80.666 139.134 4.011 1.00 54.98 O
ATOM 2 P U B 241 79.504 139.742 3.091 1.00 57.79 P
ATOM 3 OP1 U B 241 78.718 140.659 3.956 1.00 58.04 O
ATOM 4 OP2 U B 241 78.816 138.651 2.362 1.00 57.59 O
ATOM 5 O5' U B 241 80.299 140.606 2.018 1.00 61.41 O
ATOM 6 C5' U B 241 81.015 141.788 2.412 1.00 63.58 C
ATOM 7 C4' U B 241 81.638 142.440 1.206 1.00 65.35 C
ATOM 8 O4' U B 241 82.709 141.605 0.698 1.00 65.64 O
ATOM 9 C3' U B 241 80.724 142.602 0.006 1.00 67.77 C
ATOM 10 O3' U B 241 79.841 143.708 0.129 1.00 71.13 O
ATOM 11 C2' U B 241 81.729 142.774 -1.121 1.00 68.08 C
ATOM 12 O2' U B 241 82.300 144.067 -1.138 1.00 69.32 O
ATOM 13 C1' U B 241 82.800 141.762 -0.711 1.00 67.36 C
ATOM 14 N1 U B 241 82.585 140.454 -1.348 1.00 66.90 N
ATOM 15 C2 U B 241 83.369 140.135 -2.441 1.00 65.93 C
ATOM 16 O2 U B 241 84.238 140.871 -2.869 1.00 65.12 O
ATOM 17 N3 U B 241 83.095 138.919 -3.015 1.00 65.75 N
ATOM 18 C4 U B 241 82.139 138.011 -2.619 1.00 65.47 C
ATOM 19 O4 U B 241 81.961 136.988 -3.283 1.00 64.91 O
ATOM 20 C5 U B 241 81.384 138.408 -1.470 1.00 66.59 C
ATOM 21 C6 U B 241 81.628 139.584 -0.887 1.00 66.57 C
ATOM 22 P C B 242 78.296 143.533 -0.283 1.00 73.86 P
ATOM 23 OP1 C B 242 77.703 144.892 -0.330 1.00 73.94 O
ATOM 24 OP2 C B 242 77.685 142.494 0.592 1.00 73.72 O
ATOM 25 O5' C B 242 78.354 142.964 -1.770 1.00 74.05 O
TER

Atoms:
OP1: (79.571,139.444,-5.979)
OP2: (80.434,140.785,-3.950)
C3': (82.787,142.561,-8.176)
C1': (82.409,144.797,-7.526)
C5': (80.371,141.865,-7.659)
O4': (81.154,144.143,-7.600)
C8: (82.234,144.344,-5.022)
O2': (83.490,144.374,-9.621)
C6: (84.468,146.587,-3.495)
C5: (83.619,145.755,-4.246)
C4: (83.641,145.911,-5.619)
P: (79.824,140.753,-5.310)
C4': (81.303,142.876,-8.288)
C2': (83.423,143.937,-8.282)
C2: (85.147,147.510,-5.499)
N1: (85.234,147.472,-4.165)
N3: (84.390,146.779,-6.317)
N6: (84.558,146.547,-2.166)
N7: (82.726,144.760,-3.881)
N9: (82.742,145.000,-6.115)
O5': (80.725,141.655,-6.271)
O3': (83.218,141.717,-9.235)
C4: (82.139,138.011,-2.619)
N3: (83.095,138.919,-3.015)
OP1: (78.718,140.659,3.956)
OP2: (78.816,138.651,2.362)
C2: (83.369,140.135,-2.441)
C1': (82.800,141.762,-0.711)
C3': (80.724,142.602,0.006)
O5': (80.299,140.606,2.018)
O4': (82.709,141.605,0.698)
C5': (81.015,141.788,2.412)
P: (79.504,139.742,3.091)
C4': (81.638,142.440,1.206)
C2': (81.729,142.774,-1.121)
O2': (82.300,144.067,-1.138)
N1: (82.585,140.454,-1.348)
O4: (81.961,136.988,-3.283)
O2: (84.238,140.871,-2.869)
C6: (81.628,139.584,-0.887)
C5: (81.384,138.408,-1.470)
O3': (79.841,143.708,0.129)
Image (generated by PyMOL):
PyMOL image
show in jmol