Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:01237:01235
Extra
PDB:
ATOM 1 O3' C A1236 10.231 87.414 59.120 1.00 60.57 O
ATOM 2 P A A1237 10.334 87.442 60.714 1.00 62.37 P
ATOM 3 OP1 A A1237 11.557 86.702 61.099 1.00 61.00 O
ATOM 4 OP2 A A1237 9.027 87.049 61.288 1.00 64.28 O
ATOM 5 O5' A A1237 10.534 88.983 61.042 1.00 65.92 O
ATOM 6 C5' A A1237 11.816 89.613 60.895 1.00 69.02 C
ATOM 7 C4' A A1237 11.738 91.021 61.397 1.00 70.54 C
ATOM 8 O4' A A1237 10.832 91.763 60.548 1.00 69.76 O
ATOM 9 C3' A A1237 11.135 91.135 62.782 1.00 73.74 C
ATOM 10 O3' A A1237 12.124 90.921 63.781 1.00 82.31 O
ATOM 11 C2' A A1237 10.565 92.545 62.777 1.00 71.58 C
ATOM 12 O2' A A1237 11.531 93.547 63.008 1.00 71.57 O
ATOM 13 C1' A A1237 10.068 92.655 61.335 1.00 70.09 C
ATOM 14 N9 A A1237 8.662 92.295 61.183 1.00 69.21 N
ATOM 15 C8 A A1237 8.104 91.043 61.145 1.00 68.48 C
ATOM 16 N7 A A1237 6.802 91.050 61.025 1.00 67.59 N
ATOM 17 C5 A A1237 6.480 92.397 60.973 1.00 68.09 C
ATOM 18 C6 A A1237 5.255 93.071 60.860 1.00 69.26 C
ATOM 19 N6 A A1237 4.075 92.453 60.776 1.00 69.41 N
ATOM 20 N1 A A1237 5.282 94.421 60.837 1.00 70.27 N
ATOM 21 C2 A A1237 6.468 95.040 60.924 1.00 69.74 C
ATOM 22 N3 A A1237 7.684 94.516 61.039 1.00 68.57 N
ATOM 23 C4 A A1237 7.618 93.174 61.059 1.00 68.67 C
ATOM 24 P U A1238 11.779 90.030 65.078 1.00 88.55 P
ATOM 25 OP1 U A1238 12.605 88.792 65.002 1.00 87.61 O
ATOM 26 OP2 U A1238 10.301 89.918 65.218 1.00 88.82 O
ATOM 27 O5' U A1238 12.313 90.920 66.290 1.00 91.90 O
TER
ATOM 1 O3' C B1234 2.462 83.108 63.905 1.00 51.99 O
ATOM 2 P U B1235 3.370 82.840 62.619 1.00 54.93 P
ATOM 3 OP1 U B1235 2.480 82.361 61.530 1.00 54.64 O
ATOM 4 OP2 U B1235 4.509 81.996 63.065 1.00 51.67 O
ATOM 5 O5' U B1235 3.892 84.298 62.233 1.00 55.55 O
ATOM 6 C5' U B1235 2.952 85.332 61.874 1.00 57.39 C
ATOM 7 C4' U B1235 3.650 86.658 61.667 1.00 58.27 C
ATOM 8 O4' U B1235 4.179 87.150 62.923 1.00 59.70 O
ATOM 9 C3' U B1235 4.853 86.697 60.741 1.00 59.36 C
ATOM 10 O3' U B1235 4.492 86.728 59.373 1.00 59.76 O
ATOM 11 C2' U B1235 5.494 88.009 61.150 1.00 60.57 C
ATOM 12 O2' U B1235 4.760 89.108 60.647 1.00 61.29 O
ATOM 13 C1' U B1235 5.326 87.949 62.669 1.00 60.82 C
ATOM 14 N1 U B1235 6.489 87.330 63.327 1.00 62.61 N
ATOM 15 C2 U B1235 7.510 88.164 63.756 1.00 62.52 C
ATOM 16 O2 U B1235 7.481 89.376 63.615 1.00 62.86 O
ATOM 17 N3 U B1235 8.567 87.523 64.357 1.00 62.23 N
ATOM 18 C4 U B1235 8.706 86.165 64.570 1.00 62.47 C
ATOM 19 O4 U B1235 9.706 85.739 65.150 1.00 63.62 O
ATOM 20 C5 U B1235 7.615 85.374 64.099 1.00 62.56 C
ATOM 21 C6 U B1235 6.571 85.965 63.510 1.00 63.02 C
ATOM 22 P C B1236 5.378 85.922 58.306 1.00 59.70 P
ATOM 23 OP1 C B1236 4.631 85.856 57.023 1.00 60.02 O
ATOM 24 OP2 C B1236 5.832 84.668 58.950 1.00 60.05 O
ATOM 25 O5' C B1236 6.646 86.853 58.087 1.00 60.14 O
TER
ATOM 2 P A A1237 10.334 87.442 60.714 1.00 62.37 P
ATOM 3 OP1 A A1237 11.557 86.702 61.099 1.00 61.00 O
ATOM 4 OP2 A A1237 9.027 87.049 61.288 1.00 64.28 O
ATOM 5 O5' A A1237 10.534 88.983 61.042 1.00 65.92 O
ATOM 6 C5' A A1237 11.816 89.613 60.895 1.00 69.02 C
ATOM 7 C4' A A1237 11.738 91.021 61.397 1.00 70.54 C
ATOM 8 O4' A A1237 10.832 91.763 60.548 1.00 69.76 O
ATOM 9 C3' A A1237 11.135 91.135 62.782 1.00 73.74 C
ATOM 10 O3' A A1237 12.124 90.921 63.781 1.00 82.31 O
ATOM 11 C2' A A1237 10.565 92.545 62.777 1.00 71.58 C
ATOM 12 O2' A A1237 11.531 93.547 63.008 1.00 71.57 O
ATOM 13 C1' A A1237 10.068 92.655 61.335 1.00 70.09 C
ATOM 14 N9 A A1237 8.662 92.295 61.183 1.00 69.21 N
ATOM 15 C8 A A1237 8.104 91.043 61.145 1.00 68.48 C
ATOM 16 N7 A A1237 6.802 91.050 61.025 1.00 67.59 N
ATOM 17 C5 A A1237 6.480 92.397 60.973 1.00 68.09 C
ATOM 18 C6 A A1237 5.255 93.071 60.860 1.00 69.26 C
ATOM 19 N6 A A1237 4.075 92.453 60.776 1.00 69.41 N
ATOM 20 N1 A A1237 5.282 94.421 60.837 1.00 70.27 N
ATOM 21 C2 A A1237 6.468 95.040 60.924 1.00 69.74 C
ATOM 22 N3 A A1237 7.684 94.516 61.039 1.00 68.57 N
ATOM 23 C4 A A1237 7.618 93.174 61.059 1.00 68.67 C
ATOM 24 P U A1238 11.779 90.030 65.078 1.00 88.55 P
ATOM 25 OP1 U A1238 12.605 88.792 65.002 1.00 87.61 O
ATOM 26 OP2 U A1238 10.301 89.918 65.218 1.00 88.82 O
ATOM 27 O5' U A1238 12.313 90.920 66.290 1.00 91.90 O
TER
ATOM 1 O3' C B1234 2.462 83.108 63.905 1.00 51.99 O
ATOM 2 P U B1235 3.370 82.840 62.619 1.00 54.93 P
ATOM 3 OP1 U B1235 2.480 82.361 61.530 1.00 54.64 O
ATOM 4 OP2 U B1235 4.509 81.996 63.065 1.00 51.67 O
ATOM 5 O5' U B1235 3.892 84.298 62.233 1.00 55.55 O
ATOM 6 C5' U B1235 2.952 85.332 61.874 1.00 57.39 C
ATOM 7 C4' U B1235 3.650 86.658 61.667 1.00 58.27 C
ATOM 8 O4' U B1235 4.179 87.150 62.923 1.00 59.70 O
ATOM 9 C3' U B1235 4.853 86.697 60.741 1.00 59.36 C
ATOM 10 O3' U B1235 4.492 86.728 59.373 1.00 59.76 O
ATOM 11 C2' U B1235 5.494 88.009 61.150 1.00 60.57 C
ATOM 12 O2' U B1235 4.760 89.108 60.647 1.00 61.29 O
ATOM 13 C1' U B1235 5.326 87.949 62.669 1.00 60.82 C
ATOM 14 N1 U B1235 6.489 87.330 63.327 1.00 62.61 N
ATOM 15 C2 U B1235 7.510 88.164 63.756 1.00 62.52 C
ATOM 16 O2 U B1235 7.481 89.376 63.615 1.00 62.86 O
ATOM 17 N3 U B1235 8.567 87.523 64.357 1.00 62.23 N
ATOM 18 C4 U B1235 8.706 86.165 64.570 1.00 62.47 C
ATOM 19 O4 U B1235 9.706 85.739 65.150 1.00 63.62 O
ATOM 20 C5 U B1235 7.615 85.374 64.099 1.00 62.56 C
ATOM 21 C6 U B1235 6.571 85.965 63.510 1.00 63.02 C
ATOM 22 P C B1236 5.378 85.922 58.306 1.00 59.70 P
ATOM 23 OP1 C B1236 4.631 85.856 57.023 1.00 60.02 O
ATOM 24 OP2 C B1236 5.832 84.668 58.950 1.00 60.05 O
ATOM 25 O5' C B1236 6.646 86.853 58.087 1.00 60.14 O
TER
Atoms:
OP1: (11.557,86.702,61.099)
OP2: (9.027,87.049,61.288)
C3': (11.135,91.135,62.782)
C1': (10.068,92.655,61.335)
C5': (11.816,89.613,60.895)
O4': (10.832,91.763,60.548)
C8: (8.104,91.043,61.145)
O2': (11.531,93.547,63.008)
C6: (5.255,93.071,60.860)
C5: (6.480,92.397,60.973)
C4: (7.618,93.174,61.059)
P: (10.334,87.442,60.714)
C4': (11.738,91.021,61.397)
C2': (10.565,92.545,62.777)
C2: (6.468,95.040,60.924)
N1: (5.282,94.421,60.837)
N3: (7.684,94.516,61.039)
N6: (4.075,92.453,60.776)
N7: (6.802,91.050,61.025)
N9: (8.662,92.295,61.183)
O5': (10.534,88.983,61.042)
O3': (12.124,90.921,63.781)
OP2: (9.027,87.049,61.288)
C3': (11.135,91.135,62.782)
C1': (10.068,92.655,61.335)
C5': (11.816,89.613,60.895)
O4': (10.832,91.763,60.548)
C8: (8.104,91.043,61.145)
O2': (11.531,93.547,63.008)
C6: (5.255,93.071,60.860)
C5: (6.480,92.397,60.973)
C4: (7.618,93.174,61.059)
P: (10.334,87.442,60.714)
C4': (11.738,91.021,61.397)
C2': (10.565,92.545,62.777)
C2: (6.468,95.040,60.924)
N1: (5.282,94.421,60.837)
N3: (7.684,94.516,61.039)
N6: (4.075,92.453,60.776)
N7: (6.802,91.050,61.025)
N9: (8.662,92.295,61.183)
O5': (10.534,88.983,61.042)
O3': (12.124,90.921,63.781)
C4: (8.706,86.165,64.570)
N3: (8.567,87.523,64.357)
OP1: (2.480,82.361,61.530)
OP2: (4.509,81.996,63.065)
C2: (7.510,88.164,63.756)
C1': (5.326,87.949,62.669)
C3': (4.853,86.697,60.741)
O5': (3.892,84.298,62.233)
O4': (4.179,87.150,62.923)
C5': (2.952,85.332,61.874)
P: (3.370,82.840,62.619)
C4': (3.650,86.658,61.667)
C2': (5.494,88.009,61.150)
O2': (4.760,89.108,60.647)
N1: (6.489,87.330,63.327)
O4: (9.706,85.739,65.150)
O2: (7.481,89.376,63.615)
C6: (6.571,85.965,63.510)
C5: (7.615,85.374,64.099)
O3': (4.492,86.728,59.373)
N3: (8.567,87.523,64.357)
OP1: (2.480,82.361,61.530)
OP2: (4.509,81.996,63.065)
C2: (7.510,88.164,63.756)
C1': (5.326,87.949,62.669)
C3': (4.853,86.697,60.741)
O5': (3.892,84.298,62.233)
O4': (4.179,87.150,62.923)
C5': (2.952,85.332,61.874)
P: (3.370,82.840,62.619)
C4': (3.650,86.658,61.667)
C2': (5.494,88.009,61.150)
O2': (4.760,89.108,60.647)
N1: (6.489,87.330,63.327)
O4: (9.706,85.739,65.150)
O2: (7.481,89.376,63.615)
C6: (6.571,85.965,63.510)
C5: (7.615,85.374,64.099)
O3': (4.492,86.728,59.373)
Image (generated by PyMOL):