ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1B23:R10:R8

Extra

PDB:
ATOM 1 O3' A A 9 21.184 34.035 -8.755 1.00 73.96 O
ATOM 2 P C A 10 21.430 34.555 -7.256 1.00 75.08 P
ATOM 3 OP1 C A 10 21.854 33.381 -6.450 1.00 77.13 O
ATOM 4 OP2 C A 10 20.231 35.339 -6.848 1.00 72.79 O
ATOM 5 O5' C A 10 22.664 35.555 -7.380 1.00 71.75 O
ATOM 6 C5' C A 10 23.983 35.069 -7.698 1.00 68.72 C
ATOM 7 C4' C A 10 24.884 36.220 -8.071 1.00 69.64 C
ATOM 8 O4' C A 10 24.314 36.907 -9.216 1.00 68.97 O
ATOM 9 C3' C A 10 25.044 37.311 -7.022 1.00 71.79 C
ATOM 10 O3' C A 10 26.082 37.028 -6.096 1.00 80.81 O
ATOM 11 C2' C A 10 25.397 38.533 -7.854 1.00 68.93 C
ATOM 12 O2' C A 10 26.774 38.580 -8.168 1.00 67.49 O
ATOM 13 C1' C A 10 24.571 38.298 -9.118 1.00 66.03 C
ATOM 14 N1 C A 10 23.288 39.013 -9.060 1.00 63.65 N
ATOM 15 C2 C A 10 23.286 40.400 -9.241 1.00 63.49 C
ATOM 16 O2 C A 10 24.361 40.976 -9.469 1.00 64.04 O
ATOM 17 N3 C A 10 22.118 41.077 -9.167 1.00 62.98 N
ATOM 18 C4 C A 10 20.983 40.421 -8.923 1.00 62.29 C
ATOM 19 N4 C A 10 19.857 41.131 -8.847 1.00 61.17 N
ATOM 20 C5 C A 10 20.953 39.006 -8.745 1.00 62.96 C
ATOM 21 C6 C A 10 22.117 38.349 -8.821 1.00 63.81 C
ATOM 22 P A A 11 26.287 37.983 -4.815 1.00 87.14 P
ATOM 23 OP1 A A 11 27.597 37.630 -4.203 1.00 86.93 O
ATOM 24 OP2 A A 11 25.046 37.919 -3.994 1.00 83.76 O
ATOM 25 O5' A A 11 26.393 39.457 -5.418 1.00 82.30 O
TER

ATOM 1 P A B 8 17.525 37.291 -3.578 1.00 74.35 P
ATOM 2 OP1 A B 8 17.679 35.823 -3.805 1.00 73.51 O
ATOM 3 OP2 A B 8 18.725 38.171 -3.616 1.00 71.51 O
ATOM 4 O5' A B 8 16.475 37.873 -4.626 1.00 72.22 O
ATOM 5 C5' A B 8 15.387 37.069 -5.139 1.00 65.39 C
ATOM 6 C4' A B 8 15.102 37.452 -6.575 1.00 58.37 C
ATOM 7 O4' A B 8 14.805 38.872 -6.613 1.00 52.77 O
ATOM 8 C3' A B 8 16.277 37.232 -7.518 1.00 56.58 C
ATOM 9 O3' A B 8 15.788 36.865 -8.808 1.00 64.28 O
ATOM 10 C2' A B 8 16.958 38.598 -7.549 1.00 53.41 C
ATOM 11 O2' A B 8 17.663 38.849 -8.746 1.00 54.36 O
ATOM 12 C1' A B 8 15.779 39.557 -7.371 1.00 52.13 C
ATOM 13 N9 A B 8 16.144 40.773 -6.638 1.00 52.94 N
ATOM 14 C8 A B 8 17.272 40.977 -5.880 1.00 52.49 C
ATOM 15 N7 A B 8 17.349 42.174 -5.353 1.00 51.80 N
ATOM 16 C5 A B 8 16.192 42.805 -5.786 1.00 52.73 C
ATOM 17 C6 A B 8 15.688 44.097 -5.573 1.00 53.74 C
ATOM 18 N6 A B 8 16.304 45.020 -4.834 1.00 55.41 N
ATOM 19 N1 A B 8 14.510 44.414 -6.149 1.00 53.59 N
ATOM 20 C2 A B 8 13.886 43.485 -6.880 1.00 53.35 C
ATOM 21 N3 A B 8 14.256 42.235 -7.152 1.00 54.00 N
ATOM 22 C4 A B 8 15.437 41.952 -6.571 1.00 53.42 C
ATOM 23 P A B 9 15.968 35.353 -9.334 1.00 68.19 P
ATOM 24 OP1 A B 9 15.345 35.245 -10.673 1.00 67.98 O
ATOM 25 OP2 A B 9 15.537 34.428 -8.252 1.00 67.66 O
ATOM 26 O5' A B 9 17.538 35.193 -9.543 1.00 68.55 O
TER

Atoms:
C2: (23.286,40.400,-9.241)
OP1: (21.854,33.381,-6.450)
OP2: (20.231,35.339,-6.848)
C4: (20.983,40.421,-8.923)
O5': (22.664,35.555,-7.380)
C3': (25.044,37.311,-7.022)
C1': (24.571,38.298,-9.118)
O4': (24.314,36.907,-9.216)
C5': (23.983,35.069,-7.698)
P: (21.430,34.555,-7.256)
O2: (24.361,40.976,-9.469)
C4': (24.884,36.220,-8.071)
C2': (25.397,38.533,-7.854)
O2': (26.774,38.580,-8.168)
N1: (23.288,39.013,-9.060)
N3: (22.118,41.077,-9.167)
N4: (19.857,41.131,-8.847)
C6: (22.117,38.349,-8.821)
C5: (20.953,39.006,-8.745)
O3': (26.082,37.028,-6.096)
OP1: (17.679,35.823,-3.805)
OP2: (18.725,38.171,-3.616)
C3': (16.277,37.232,-7.518)
C1': (15.779,39.557,-7.371)
C5': (15.387,37.069,-5.139)
O4': (14.805,38.872,-6.613)
C8: (17.272,40.977,-5.880)
O2': (17.663,38.849,-8.746)
C6: (15.688,44.097,-5.573)
C5: (16.192,42.805,-5.786)
C4: (15.437,41.952,-6.571)
P: (17.525,37.291,-3.578)
C4': (15.102,37.452,-6.575)
C2': (16.958,38.598,-7.549)
C2: (13.886,43.485,-6.880)
N1: (14.510,44.414,-6.149)
N3: (14.256,42.235,-7.152)
N6: (16.304,45.020,-4.834)
N7: (17.349,42.174,-5.353)
N9: (16.144,40.773,-6.638)
O5': (16.475,37.873,-4.626)
O3': (15.788,36.865,-8.808)
Image (generated by PyMOL):
PyMOL image
show in jmol