Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B57:B55
Extra
PDB:
ATOM 1 O3' A A 56 7.092 -29.320 -4.614 1.00 52.43 O
ATOM 2 P A A 57 7.211 -30.179 -3.260 1.00 61.57 P
ATOM 3 OP1 A A 57 8.248 -29.451 -2.464 1.00 45.84 O
ATOM 4 OP2 A A 57 7.369 -31.646 -3.580 1.00 56.26 O
ATOM 5 O5' A A 57 5.743 -29.953 -2.604 1.00 53.45 O
ATOM 6 C5' A A 57 5.407 -28.645 -2.012 1.00 47.73 C
ATOM 7 C4' A A 57 4.052 -28.768 -1.334 1.00 45.70 C
ATOM 8 O4' A A 57 3.139 -28.898 -2.430 1.00 42.56 O
ATOM 9 C3' A A 57 3.753 -30.043 -0.507 1.00 45.13 C
ATOM 10 O3' A A 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 11 C2' A A 57 2.253 -30.149 -0.621 1.00 44.17 C
ATOM 12 O2' A A 57 1.620 -29.098 0.098 1.00 41.20 O
ATOM 13 C1' A A 57 2.088 -29.800 -2.091 1.00 43.10 C
ATOM 14 N9 A A 57 2.127 -30.875 -3.039 1.00 41.63 N
ATOM 15 C8 A A 57 3.242 -31.323 -3.689 1.00 44.64 C
ATOM 16 N7 A A 57 2.976 -32.296 -4.541 1.00 44.87 N
ATOM 17 C5 A A 57 1.617 -32.503 -4.434 1.00 39.29 C
ATOM 18 C6 A A 57 0.745 -33.414 -5.039 1.00 44.48 C
ATOM 19 N6 A A 57 1.164 -34.316 -5.948 1.00 48.12 N
ATOM 20 N1 A A 57 -0.568 -33.391 -4.708 1.00 43.63 N
ATOM 21 C2 A A 57 -0.959 -32.477 -3.808 1.00 41.67 C
ATOM 22 N3 A A 57 -0.206 -31.602 -3.154 1.00 44.70 N
ATOM 23 C4 A A 57 1.077 -31.646 -3.511 1.00 42.82 C
ATOM 24 P U A 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 25 OP1 U A 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 26 OP2 U A 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 27 O5' U A 58 3.252 -31.753 2.276 1.00 46.19 O
TER
ATOM 1 O3' G B 54 10.049 -38.706 -5.381 1.00 61.20 O
ATOM 2 P U B 55 10.246 -37.256 -6.038 1.00 68.16 P
ATOM 3 OP1 U B 55 10.452 -37.480 -7.490 1.00 65.19 O
ATOM 4 OP2 U B 55 11.236 -36.555 -5.175 1.00 54.65 O
ATOM 5 O5' U B 55 8.842 -36.499 -5.951 1.00 69.21 O
ATOM 6 C5' U B 55 7.646 -37.030 -6.530 1.00 62.90 C
ATOM 7 C4' U B 55 6.581 -36.047 -6.104 1.00 60.71 C
ATOM 8 O4' U B 55 6.382 -36.183 -4.662 1.00 59.36 O
ATOM 9 C3' U B 55 6.986 -34.569 -6.268 1.00 60.37 C
ATOM 10 O3' U B 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 11 C2' U B 55 5.955 -33.944 -5.330 1.00 52.24 C
ATOM 12 O2' U B 55 4.654 -34.067 -5.867 1.00 51.90 O
ATOM 13 C1' U B 55 5.971 -34.912 -4.140 1.00 55.61 C
ATOM 14 N1 U B 55 6.739 -34.390 -2.933 1.00 55.74 N
ATOM 15 C2 U B 55 6.029 -33.624 -2.027 1.00 50.29 C
ATOM 16 O2 U B 55 4.843 -33.430 -2.171 1.00 46.93 O
ATOM 17 N3 U B 55 6.747 -33.153 -0.956 1.00 45.37 N
ATOM 18 C4 U B 55 8.111 -33.345 -0.722 1.00 49.15 C
ATOM 19 O4 U B 55 8.666 -32.872 0.274 1.00 48.46 O
ATOM 20 C5 U B 55 8.800 -34.137 -1.726 1.00 50.13 C
ATOM 21 C6 U B 55 8.097 -34.620 -2.763 1.00 55.39 C
ATOM 22 P A B 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 23 OP1 A B 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 24 OP2 A B 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 25 O5' A B 56 6.719 -31.431 -7.555 1.00 62.91 O
TER
ATOM 2 P A A 57 7.211 -30.179 -3.260 1.00 61.57 P
ATOM 3 OP1 A A 57 8.248 -29.451 -2.464 1.00 45.84 O
ATOM 4 OP2 A A 57 7.369 -31.646 -3.580 1.00 56.26 O
ATOM 5 O5' A A 57 5.743 -29.953 -2.604 1.00 53.45 O
ATOM 6 C5' A A 57 5.407 -28.645 -2.012 1.00 47.73 C
ATOM 7 C4' A A 57 4.052 -28.768 -1.334 1.00 45.70 C
ATOM 8 O4' A A 57 3.139 -28.898 -2.430 1.00 42.56 O
ATOM 9 C3' A A 57 3.753 -30.043 -0.507 1.00 45.13 C
ATOM 10 O3' A A 57 4.036 -29.827 0.822 1.00 46.73 O
ATOM 11 C2' A A 57 2.253 -30.149 -0.621 1.00 44.17 C
ATOM 12 O2' A A 57 1.620 -29.098 0.098 1.00 41.20 O
ATOM 13 C1' A A 57 2.088 -29.800 -2.091 1.00 43.10 C
ATOM 14 N9 A A 57 2.127 -30.875 -3.039 1.00 41.63 N
ATOM 15 C8 A A 57 3.242 -31.323 -3.689 1.00 44.64 C
ATOM 16 N7 A A 57 2.976 -32.296 -4.541 1.00 44.87 N
ATOM 17 C5 A A 57 1.617 -32.503 -4.434 1.00 39.29 C
ATOM 18 C6 A A 57 0.745 -33.414 -5.039 1.00 44.48 C
ATOM 19 N6 A A 57 1.164 -34.316 -5.948 1.00 48.12 N
ATOM 20 N1 A A 57 -0.568 -33.391 -4.708 1.00 43.63 N
ATOM 21 C2 A A 57 -0.959 -32.477 -3.808 1.00 41.67 C
ATOM 22 N3 A A 57 -0.206 -31.602 -3.154 1.00 44.70 N
ATOM 23 C4 A A 57 1.077 -31.646 -3.511 1.00 42.82 C
ATOM 24 P U A 58 4.586 -31.004 1.774 1.00 52.26 P
ATOM 25 OP1 U A 58 5.199 -30.327 2.918 1.00 39.92 O
ATOM 26 OP2 U A 58 5.393 -31.909 0.943 1.00 51.63 O
ATOM 27 O5' U A 58 3.252 -31.753 2.276 1.00 46.19 O
TER
ATOM 1 O3' G B 54 10.049 -38.706 -5.381 1.00 61.20 O
ATOM 2 P U B 55 10.246 -37.256 -6.038 1.00 68.16 P
ATOM 3 OP1 U B 55 10.452 -37.480 -7.490 1.00 65.19 O
ATOM 4 OP2 U B 55 11.236 -36.555 -5.175 1.00 54.65 O
ATOM 5 O5' U B 55 8.842 -36.499 -5.951 1.00 69.21 O
ATOM 6 C5' U B 55 7.646 -37.030 -6.530 1.00 62.90 C
ATOM 7 C4' U B 55 6.581 -36.047 -6.104 1.00 60.71 C
ATOM 8 O4' U B 55 6.382 -36.183 -4.662 1.00 59.36 O
ATOM 9 C3' U B 55 6.986 -34.569 -6.268 1.00 60.37 C
ATOM 10 O3' U B 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 11 C2' U B 55 5.955 -33.944 -5.330 1.00 52.24 C
ATOM 12 O2' U B 55 4.654 -34.067 -5.867 1.00 51.90 O
ATOM 13 C1' U B 55 5.971 -34.912 -4.140 1.00 55.61 C
ATOM 14 N1 U B 55 6.739 -34.390 -2.933 1.00 55.74 N
ATOM 15 C2 U B 55 6.029 -33.624 -2.027 1.00 50.29 C
ATOM 16 O2 U B 55 4.843 -33.430 -2.171 1.00 46.93 O
ATOM 17 N3 U B 55 6.747 -33.153 -0.956 1.00 45.37 N
ATOM 18 C4 U B 55 8.111 -33.345 -0.722 1.00 49.15 C
ATOM 19 O4 U B 55 8.666 -32.872 0.274 1.00 48.46 O
ATOM 20 C5 U B 55 8.800 -34.137 -1.726 1.00 50.13 C
ATOM 21 C6 U B 55 8.097 -34.620 -2.763 1.00 55.39 C
ATOM 22 P A B 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 23 OP1 A B 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 24 OP2 A B 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 25 O5' A B 56 6.719 -31.431 -7.555 1.00 62.91 O
TER
Atoms:
OP1: (8.248,-29.451,-2.464)
OP2: (7.369,-31.646,-3.580)
C3': (3.753,-30.043,-0.507)
C1': (2.088,-29.800,-2.091)
C5': (5.407,-28.645,-2.012)
O4': (3.139,-28.898,-2.430)
C8: (3.242,-31.323,-3.689)
O2': (1.620,-29.098,0.098)
C6: (0.745,-33.414,-5.039)
C5: (1.617,-32.503,-4.434)
C4: (1.077,-31.646,-3.511)
P: (7.211,-30.179,-3.260)
C4': (4.052,-28.768,-1.334)
C2': (2.253,-30.149,-0.621)
C2: (-0.959,-32.477,-3.808)
N1: (-0.568,-33.391,-4.708)
N3: (-0.206,-31.602,-3.154)
N6: (1.164,-34.316,-5.948)
N7: (2.976,-32.296,-4.541)
N9: (2.127,-30.875,-3.039)
O5': (5.743,-29.953,-2.604)
O3': (4.036,-29.827,0.822)
OP2: (7.369,-31.646,-3.580)
C3': (3.753,-30.043,-0.507)
C1': (2.088,-29.800,-2.091)
C5': (5.407,-28.645,-2.012)
O4': (3.139,-28.898,-2.430)
C8: (3.242,-31.323,-3.689)
O2': (1.620,-29.098,0.098)
C6: (0.745,-33.414,-5.039)
C5: (1.617,-32.503,-4.434)
C4: (1.077,-31.646,-3.511)
P: (7.211,-30.179,-3.260)
C4': (4.052,-28.768,-1.334)
C2': (2.253,-30.149,-0.621)
C2: (-0.959,-32.477,-3.808)
N1: (-0.568,-33.391,-4.708)
N3: (-0.206,-31.602,-3.154)
N6: (1.164,-34.316,-5.948)
N7: (2.976,-32.296,-4.541)
N9: (2.127,-30.875,-3.039)
O5': (5.743,-29.953,-2.604)
O3': (4.036,-29.827,0.822)
C4: (8.111,-33.345,-0.722)
N3: (6.747,-33.153,-0.956)
OP1: (10.452,-37.480,-7.490)
OP2: (11.236,-36.555,-5.175)
C2: (6.029,-33.624,-2.027)
C1': (5.971,-34.912,-4.140)
C3': (6.986,-34.569,-6.268)
O5': (8.842,-36.499,-5.951)
O4': (6.382,-36.183,-4.662)
C5': (7.646,-37.030,-6.530)
P: (10.246,-37.256,-6.038)
C4': (6.581,-36.047,-6.104)
C2': (5.955,-33.944,-5.330)
O2': (4.654,-34.067,-5.867)
N1: (6.739,-34.390,-2.933)
O4: (8.666,-32.872,0.274)
O2: (4.843,-33.430,-2.171)
C6: (8.097,-34.620,-2.763)
C5: (8.800,-34.137,-1.726)
O3': (6.910,-34.094,-7.677)
N3: (6.747,-33.153,-0.956)
OP1: (10.452,-37.480,-7.490)
OP2: (11.236,-36.555,-5.175)
C2: (6.029,-33.624,-2.027)
C1': (5.971,-34.912,-4.140)
C3': (6.986,-34.569,-6.268)
O5': (8.842,-36.499,-5.951)
O4': (6.382,-36.183,-4.662)
C5': (7.646,-37.030,-6.530)
P: (10.246,-37.256,-6.038)
C4': (6.581,-36.047,-6.104)
C2': (5.955,-33.944,-5.330)
O2': (4.654,-34.067,-5.867)
N1: (6.739,-34.390,-2.933)
O4: (8.666,-32.872,0.274)
O2: (4.843,-33.430,-2.171)
C6: (8.097,-34.620,-2.763)
C5: (8.800,-34.137,-1.726)
O3': (6.910,-34.094,-7.677)
Image (generated by PyMOL):