ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DS7:B49:B19

Extra

PDB:
ATOM 1 O3' U A 48 -37.620 30.558 -17.731 1.00 44.61 O
ATOM 2 P A A 49 -38.918 31.368 -17.254 1.00 44.46 P
ATOM 3 OP1 A A 49 -38.848 31.605 -15.808 1.00 44.96 O
ATOM 4 OP2 A A 49 -40.051 30.627 -17.843 1.00 45.92 O
ATOM 5 O5' A A 49 -38.838 32.779 -18.011 1.00 44.27 O
ATOM 6 C5' A A 49 -39.361 32.941 -19.317 1.00 40.43 C
ATOM 7 C4' A A 49 -38.584 34.023 -20.070 1.00 38.81 C
ATOM 8 O4' A A 49 -37.145 33.902 -19.876 1.00 38.00 O
ATOM 9 C3' A A 49 -38.788 34.008 -21.571 1.00 37.46 C
ATOM 10 O3' A A 49 -39.929 34.804 -21.755 1.00 35.55 O
ATOM 11 C2' A A 49 -37.510 34.653 -22.097 1.00 35.16 C
ATOM 12 O2' A A 49 -37.548 36.040 -21.898 1.00 35.55 O
ATOM 13 C1' A A 49 -36.467 34.112 -21.116 1.00 36.21 C
ATOM 14 N9 A A 49 -35.745 32.861 -21.454 1.00 33.59 N
ATOM 15 C8 A A 49 -36.276 31.739 -22.010 1.00 32.84 C
ATOM 16 N7 A A 49 -35.442 30.730 -22.063 1.00 33.49 N
ATOM 17 C5 A A 49 -34.265 31.235 -21.542 1.00 31.80 C
ATOM 18 C6 A A 49 -32.977 30.657 -21.349 1.00 30.87 C
ATOM 19 N6 A A 49 -32.676 29.374 -21.620 1.00 31.48 N
ATOM 20 N1 A A 49 -32.015 31.438 -20.847 1.00 29.88 N
ATOM 21 C2 A A 49 -32.329 32.716 -20.533 1.00 30.83 C
ATOM 22 N3 A A 49 -33.492 33.364 -20.667 1.00 30.62 N
ATOM 23 C4 A A 49 -34.431 32.561 -21.188 1.00 32.13 C
ATOM 24 P A A 50 -40.814 34.648 -23.066 1.00 36.31 P
ATOM 25 OP1 A A 50 -42.061 35.455 -22.892 1.00 38.00 O
ATOM 26 OP2 A A 50 -40.889 33.173 -23.263 1.00 38.68 O
ATOM 27 O5' A A 50 -40.003 35.364 -24.253 1.00 34.89 O
TER

ATOM 1 O3' A B 18 -38.072 22.462 -25.930 1.00 20.52 O
ATOM 2 P U B 19 -38.074 22.790 -24.377 1.00 22.88 P
ATOM 3 OP1 U B 19 -37.929 21.492 -23.583 1.00 24.43 O
ATOM 4 OP2 U B 19 -39.232 23.709 -24.113 1.00 21.55 O
ATOM 5 O5' U B 19 -36.730 23.627 -24.081 1.00 20.31 O
ATOM 6 C5' U B 19 -35.476 23.026 -24.311 1.00 19.82 C
ATOM 7 C4' U B 19 -34.346 24.043 -24.258 1.00 20.20 C
ATOM 8 O4' U B 19 -34.663 25.194 -25.108 1.00 20.44 O
ATOM 9 C3' U B 19 -34.231 24.592 -22.809 1.00 19.66 C
ATOM 10 O3' U B 19 -32.883 24.707 -22.469 1.00 19.61 O
ATOM 11 C2' U B 19 -34.916 25.956 -22.818 1.00 20.31 C
ATOM 12 O2' U B 19 -34.251 26.890 -22.001 1.00 17.22 O
ATOM 13 C1' U B 19 -34.701 26.381 -24.273 1.00 21.67 C
ATOM 14 N1 U B 19 -35.668 27.365 -24.733 1.00 20.98 N
ATOM 15 C2 U B 19 -35.252 28.687 -24.895 1.00 21.38 C
ATOM 16 O2 U B 19 -34.094 29.076 -24.751 1.00 19.65 O
ATOM 17 N3 U B 19 -36.289 29.575 -25.183 1.00 18.63 N
ATOM 18 C4 U B 19 -37.612 29.269 -25.279 1.00 20.86 C
ATOM 19 O4 U B 19 -38.411 30.155 -25.463 1.00 20.45 O
ATOM 20 C5 U B 19 -37.932 27.878 -25.127 1.00 20.34 C
ATOM 21 C6 U B 19 -36.973 27.012 -24.891 1.00 20.54 C
ATOM 22 P A B 20 -32.219 23.722 -21.421 1.00 19.38 P
ATOM 23 OP1 A B 20 -32.665 22.325 -21.818 1.00 20.30 O
ATOM 24 OP2 A B 20 -32.436 24.163 -20.061 1.00 17.30 O
ATOM 25 O5' A B 20 -30.668 23.907 -21.675 1.00 20.09 O
TER

Atoms:
OP1: (-38.848,31.605,-15.808)
OP2: (-40.051,30.627,-17.843)
C3': (-38.788,34.008,-21.571)
C1': (-36.467,34.112,-21.116)
C5': (-39.361,32.941,-19.317)
O4': (-37.145,33.902,-19.876)
C8: (-36.276,31.739,-22.010)
O2': (-37.548,36.040,-21.898)
C6: (-32.977,30.657,-21.349)
C5: (-34.265,31.235,-21.542)
C4: (-34.431,32.561,-21.188)
P: (-38.918,31.368,-17.254)
C4': (-38.584,34.023,-20.070)
C2': (-37.510,34.653,-22.097)
C2: (-32.329,32.716,-20.533)
N1: (-32.015,31.438,-20.847)
N3: (-33.492,33.364,-20.667)
N6: (-32.676,29.374,-21.620)
N7: (-35.442,30.730,-22.063)
N9: (-35.745,32.861,-21.454)
O5': (-38.838,32.779,-18.011)
O3': (-39.929,34.804,-21.755)
C4: (-37.612,29.269,-25.279)
N3: (-36.289,29.575,-25.183)
OP1: (-37.929,21.492,-23.583)
OP2: (-39.232,23.709,-24.113)
C2: (-35.252,28.687,-24.895)
C1': (-34.701,26.381,-24.273)
C3': (-34.231,24.592,-22.809)
O5': (-36.730,23.627,-24.081)
O4': (-34.663,25.194,-25.108)
C5': (-35.476,23.026,-24.311)
P: (-38.074,22.790,-24.377)
C4': (-34.346,24.043,-24.258)
C2': (-34.916,25.956,-22.818)
O2': (-34.251,26.890,-22.001)
N1: (-35.668,27.365,-24.733)
O4: (-38.411,30.155,-25.463)
O2: (-34.094,29.076,-24.751)
C6: (-36.973,27.012,-24.891)
C5: (-37.932,27.878,-25.127)
O3': (-32.883,24.707,-22.469)
Image (generated by PyMOL):
PyMOL image
show in jmol