ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A249:A449

Extra

PDB:
ATOM 1 O3' C A 248 -63.632 -65.243 89.907 1.00 79.33 O
ATOM 2 P A A 249 -63.500 -65.080 91.484 1.00 85.49 P
ATOM 3 OP1 A A 249 -62.078 -65.190 91.893 1.00 76.63 O
ATOM 4 OP2 A A 249 -64.519 -65.981 92.072 1.00 71.19 O
ATOM 5 O5' A A 249 -63.973 -63.562 91.653 1.00 68.92 O
ATOM 6 C5' A A 249 -63.816 -62.883 92.879 1.00 61.47 C
ATOM 7 C4' A A 249 -63.786 -61.401 92.593 1.00 74.20 C
ATOM 8 O4' A A 249 -62.598 -61.096 91.812 1.00 73.69 O
ATOM 9 C3' A A 249 -64.970 -60.897 91.762 1.00 68.81 C
ATOM 10 O3' A A 249 -65.400 -59.620 92.233 1.00 65.49 O
ATOM 11 C2' A A 249 -64.348 -60.778 90.375 1.00 78.19 C
ATOM 12 O2' A A 249 -65.021 -59.867 89.537 1.00 73.07 O
ATOM 13 C1' A A 249 -63.042 -60.169 90.843 1.00 86.49 C
ATOM 14 N9 A A 249 -62.015 -59.919 89.840 1.00 81.70 N
ATOM 15 C8 A A 249 -61.797 -58.749 89.166 1.00 87.26 C
ATOM 16 N7 A A 249 -60.788 -58.797 88.332 1.00 82.83 N
ATOM 17 C5 A A 249 -60.322 -60.083 88.485 1.00 73.21 C
ATOM 18 C6 A A 249 -59.262 -60.751 87.875 1.00 81.28 C
ATOM 19 N6 A A 249 -58.472 -60.174 86.963 1.00 82.50 N
ATOM 20 N1 A A 249 -59.063 -62.032 88.245 1.00 96.37 N
ATOM 21 C2 A A 249 -59.869 -62.586 89.162 1.00 91.66 C
ATOM 22 N3 A A 249 -60.900 -62.050 89.806 1.00 72.11 N
ATOM 23 C4 A A 249 -61.061 -60.788 89.409 1.00 70.88 C
ATOM 24 P G A 250 -66.456 -59.495 93.426 1.00 50.74 P
ATOM 25 OP1 G A 250 -66.426 -60.767 94.175 1.00 70.80 O
ATOM 26 OP2 G A 250 -67.737 -59.029 92.846 1.00 54.34 O
ATOM 27 O5' G A 250 -65.850 -58.347 94.379 1.00 61.28 O
TER

ATOM 1 O3' C B 448 -56.258 -52.021 82.224 1.00 62.94 O
ATOM 2 P U B 449 -56.942 -53.052 81.214 1.00 54.48 P
ATOM 3 OP1 U B 449 -55.883 -53.571 80.319 1.00 51.70 O
ATOM 4 OP2 U B 449 -58.146 -52.407 80.629 1.00 66.06 O
ATOM 5 O5' U B 449 -57.458 -54.210 82.196 1.00 56.27 O
ATOM 6 C5' U B 449 -56.609 -54.664 83.247 1.00 62.41 C
ATOM 7 C4' U B 449 -57.318 -55.642 84.169 1.00 59.30 C
ATOM 8 O4' U B 449 -57.995 -54.934 85.244 1.00 61.72 O
ATOM 9 C3' U B 449 -58.423 -56.452 83.520 1.00 51.69 C
ATOM 10 O3' U B 449 -57.896 -57.509 82.773 1.00 37.43 O
ATOM 11 C2' U B 449 -59.179 -56.925 84.757 1.00 53.80 C
ATOM 12 O2' U B 449 -58.550 -58.021 85.395 1.00 46.90 O
ATOM 13 C1' U B 449 -59.166 -55.644 85.607 1.00 58.62 C
ATOM 14 N1 U B 449 -60.333 -54.765 85.296 1.00 52.84 N
ATOM 15 C2 U B 449 -61.515 -54.920 85.975 1.00 56.26 C
ATOM 16 O2 U B 449 -61.658 -55.745 86.852 1.00 67.16 O
ATOM 17 N3 U B 449 -62.523 -54.072 85.597 1.00 52.08 N
ATOM 18 C4 U B 449 -62.466 -53.106 84.621 1.00 49.58 C
ATOM 19 O4 U B 449 -63.443 -52.418 84.379 1.00 53.14 O
ATOM 20 C5 U B 449 -61.204 -53.003 83.955 1.00 58.20 C
ATOM 21 C6 U B 449 -60.209 -53.818 84.306 1.00 59.71 C
ATOM 22 P A B 450 -58.870 -58.217 81.723 1.00 50.84 P
ATOM 23 OP1 A B 450 -58.377 -57.948 80.345 1.00 57.10 O
ATOM 24 OP2 A B 450 -60.240 -57.791 82.055 1.00 66.80 O
ATOM 25 O5' A B 450 -58.782 -59.776 82.111 1.00 46.96 O
TER

Atoms:
OP1: (-62.078,-65.190,91.893)
OP2: (-64.519,-65.981,92.072)
C3': (-64.970,-60.897,91.762)
C1': (-63.042,-60.169,90.843)
C5': (-63.816,-62.883,92.879)
O4': (-62.598,-61.096,91.812)
C8: (-61.797,-58.749,89.166)
O2': (-65.021,-59.867,89.537)
C6: (-59.262,-60.751,87.875)
C5: (-60.322,-60.083,88.485)
C4: (-61.061,-60.788,89.409)
P: (-63.500,-65.080,91.484)
C4': (-63.786,-61.401,92.593)
C2': (-64.348,-60.778,90.375)
C2: (-59.869,-62.586,89.162)
N1: (-59.063,-62.032,88.245)
N3: (-60.900,-62.050,89.806)
N6: (-58.472,-60.174,86.963)
N7: (-60.788,-58.797,88.332)
N9: (-62.015,-59.919,89.840)
O5': (-63.973,-63.562,91.653)
O3': (-65.400,-59.620,92.233)
C4: (-62.466,-53.106,84.621)
N3: (-62.523,-54.072,85.597)
OP1: (-55.883,-53.571,80.319)
OP2: (-58.146,-52.407,80.629)
C2: (-61.515,-54.920,85.975)
C1': (-59.166,-55.644,85.607)
C3': (-58.423,-56.452,83.520)
O5': (-57.458,-54.210,82.196)
O4': (-57.995,-54.934,85.244)
C5': (-56.609,-54.664,83.247)
P: (-56.942,-53.052,81.214)
C4': (-57.318,-55.642,84.169)
C2': (-59.179,-56.925,84.757)
O2': (-58.550,-58.021,85.395)
N1: (-60.333,-54.765,85.296)
O4: (-63.443,-52.418,84.379)
O2: (-61.658,-55.745,86.852)
C6: (-60.209,-53.818,84.306)
C5: (-61.204,-53.003,83.955)
O3': (-57.896,-57.509,82.773)
Image (generated by PyMOL):
PyMOL image
show in jmol