Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A49:A19
Extra
PDB:
ATOM 1 O3' U A 48 50.896 21.214 10.866 1.00 35.07 O
ATOM 2 P A A 49 49.521 21.996 10.621 1.00 35.58 P
ATOM 3 OP1 A A 49 49.717 23.387 11.103 1.00 37.35 O
ATOM 4 OP2 A A 49 48.405 21.180 11.164 1.00 35.30 O
ATOM 5 O5' A A 49 49.385 22.056 9.036 1.00 34.33 O
ATOM 6 C5' A A 49 48.426 22.909 8.430 1.00 31.70 C
ATOM 7 C4' A A 49 47.633 22.155 7.392 1.00 30.21 C
ATOM 8 O4' A A 49 47.796 20.724 7.582 1.00 28.67 O
ATOM 9 C3' A A 49 46.134 22.399 7.436 1.00 29.23 C
ATOM 10 O3' A A 49 45.840 23.550 6.648 1.00 28.96 O
ATOM 11 C2' A A 49 45.582 21.117 6.816 1.00 27.98 C
ATOM 12 O2' A A 49 45.646 21.135 5.402 1.00 27.90 O
ATOM 13 C1' A A 49 46.563 20.067 7.346 1.00 27.28 C
ATOM 14 N9 A A 49 46.181 19.387 8.585 1.00 25.01 N
ATOM 15 C8 A A 49 45.628 19.919 9.724 1.00 24.12 C
ATOM 16 N7 A A 49 45.483 19.048 10.697 1.00 23.56 N
ATOM 17 C5 A A 49 45.960 17.861 10.157 1.00 22.71 C
ATOM 18 C6 A A 49 46.099 16.566 10.690 1.00 22.51 C
ATOM 19 N6 A A 49 45.775 16.240 11.948 1.00 22.07 N
ATOM 20 N1 A A 49 46.596 15.606 9.881 1.00 22.41 N
ATOM 21 C2 A A 49 46.939 15.936 8.629 1.00 23.08 C
ATOM 22 N3 A A 49 46.867 17.118 8.020 1.00 22.79 N
ATOM 23 C4 A A 49 46.366 18.049 8.848 1.00 23.33 C
ATOM 24 P A A 50 44.474 24.360 6.886 1.00 29.12 P
ATOM 25 OP1 A A 50 44.568 25.617 6.094 1.00 30.02 O
ATOM 26 OP2 A A 50 44.207 24.431 8.347 1.00 29.33 O
ATOM 27 O5' A A 50 43.364 23.438 6.207 1.00 26.89 O
TER
ATOM 1 O3' A B 18 41.540 21.521 18.931 1.00 18.48 O
ATOM 2 P U B 19 43.115 21.590 18.662 1.00 20.36 P
ATOM 3 OP1 U B 19 43.779 21.528 19.993 1.00 21.42 O
ATOM 4 OP2 U B 19 43.390 22.730 17.747 1.00 20.37 O
ATOM 5 O5' U B 19 43.425 20.241 17.871 1.00 18.24 O
ATOM 6 C5' U B 19 42.889 19.024 18.356 1.00 17.51 C
ATOM 7 C4' U B 19 43.154 17.860 17.420 1.00 17.11 C
ATOM 8 O4' U B 19 42.391 18.044 16.186 1.00 16.13 O
ATOM 9 C3' U B 19 44.611 17.742 16.965 1.00 16.55 C
ATOM 10 O3' U B 19 45.002 16.399 16.770 1.00 17.64 O
ATOM 11 C2' U B 19 44.651 18.511 15.651 1.00 17.41 C
ATOM 12 O2' U B 19 45.575 17.968 14.726 1.00 16.14 O
ATOM 13 C1' U B 19 43.279 18.179 15.093 1.00 16.28 C
ATOM 14 N1 U B 19 42.811 19.177 14.125 1.00 16.08 N
ATOM 15 C2 U B 19 42.674 18.770 12.805 1.00 16.28 C
ATOM 16 O2 U B 19 42.791 17.603 12.443 1.00 15.52 O
ATOM 17 N3 U B 19 42.396 19.779 11.921 1.00 15.04 N
ATOM 18 C4 U B 19 42.223 21.115 12.221 1.00 16.16 C
ATOM 19 O4 U B 19 42.077 21.922 11.305 1.00 16.34 O
ATOM 20 C5 U B 19 42.309 21.434 13.613 1.00 14.57 C
ATOM 21 C6 U B 19 42.586 20.473 14.495 1.00 15.13 C
ATOM 22 P A B 20 46.078 15.739 17.756 1.00 16.86 P
ATOM 23 OP1 A B 20 45.682 16.105 19.143 1.00 16.11 O
ATOM 24 OP2 A B 20 47.445 16.052 17.285 1.00 17.77 O
ATOM 25 O5' A B 20 45.845 14.182 17.543 1.00 15.88 O
TER
ATOM 2 P A A 49 49.521 21.996 10.621 1.00 35.58 P
ATOM 3 OP1 A A 49 49.717 23.387 11.103 1.00 37.35 O
ATOM 4 OP2 A A 49 48.405 21.180 11.164 1.00 35.30 O
ATOM 5 O5' A A 49 49.385 22.056 9.036 1.00 34.33 O
ATOM 6 C5' A A 49 48.426 22.909 8.430 1.00 31.70 C
ATOM 7 C4' A A 49 47.633 22.155 7.392 1.00 30.21 C
ATOM 8 O4' A A 49 47.796 20.724 7.582 1.00 28.67 O
ATOM 9 C3' A A 49 46.134 22.399 7.436 1.00 29.23 C
ATOM 10 O3' A A 49 45.840 23.550 6.648 1.00 28.96 O
ATOM 11 C2' A A 49 45.582 21.117 6.816 1.00 27.98 C
ATOM 12 O2' A A 49 45.646 21.135 5.402 1.00 27.90 O
ATOM 13 C1' A A 49 46.563 20.067 7.346 1.00 27.28 C
ATOM 14 N9 A A 49 46.181 19.387 8.585 1.00 25.01 N
ATOM 15 C8 A A 49 45.628 19.919 9.724 1.00 24.12 C
ATOM 16 N7 A A 49 45.483 19.048 10.697 1.00 23.56 N
ATOM 17 C5 A A 49 45.960 17.861 10.157 1.00 22.71 C
ATOM 18 C6 A A 49 46.099 16.566 10.690 1.00 22.51 C
ATOM 19 N6 A A 49 45.775 16.240 11.948 1.00 22.07 N
ATOM 20 N1 A A 49 46.596 15.606 9.881 1.00 22.41 N
ATOM 21 C2 A A 49 46.939 15.936 8.629 1.00 23.08 C
ATOM 22 N3 A A 49 46.867 17.118 8.020 1.00 22.79 N
ATOM 23 C4 A A 49 46.366 18.049 8.848 1.00 23.33 C
ATOM 24 P A A 50 44.474 24.360 6.886 1.00 29.12 P
ATOM 25 OP1 A A 50 44.568 25.617 6.094 1.00 30.02 O
ATOM 26 OP2 A A 50 44.207 24.431 8.347 1.00 29.33 O
ATOM 27 O5' A A 50 43.364 23.438 6.207 1.00 26.89 O
TER
ATOM 1 O3' A B 18 41.540 21.521 18.931 1.00 18.48 O
ATOM 2 P U B 19 43.115 21.590 18.662 1.00 20.36 P
ATOM 3 OP1 U B 19 43.779 21.528 19.993 1.00 21.42 O
ATOM 4 OP2 U B 19 43.390 22.730 17.747 1.00 20.37 O
ATOM 5 O5' U B 19 43.425 20.241 17.871 1.00 18.24 O
ATOM 6 C5' U B 19 42.889 19.024 18.356 1.00 17.51 C
ATOM 7 C4' U B 19 43.154 17.860 17.420 1.00 17.11 C
ATOM 8 O4' U B 19 42.391 18.044 16.186 1.00 16.13 O
ATOM 9 C3' U B 19 44.611 17.742 16.965 1.00 16.55 C
ATOM 10 O3' U B 19 45.002 16.399 16.770 1.00 17.64 O
ATOM 11 C2' U B 19 44.651 18.511 15.651 1.00 17.41 C
ATOM 12 O2' U B 19 45.575 17.968 14.726 1.00 16.14 O
ATOM 13 C1' U B 19 43.279 18.179 15.093 1.00 16.28 C
ATOM 14 N1 U B 19 42.811 19.177 14.125 1.00 16.08 N
ATOM 15 C2 U B 19 42.674 18.770 12.805 1.00 16.28 C
ATOM 16 O2 U B 19 42.791 17.603 12.443 1.00 15.52 O
ATOM 17 N3 U B 19 42.396 19.779 11.921 1.00 15.04 N
ATOM 18 C4 U B 19 42.223 21.115 12.221 1.00 16.16 C
ATOM 19 O4 U B 19 42.077 21.922 11.305 1.00 16.34 O
ATOM 20 C5 U B 19 42.309 21.434 13.613 1.00 14.57 C
ATOM 21 C6 U B 19 42.586 20.473 14.495 1.00 15.13 C
ATOM 22 P A B 20 46.078 15.739 17.756 1.00 16.86 P
ATOM 23 OP1 A B 20 45.682 16.105 19.143 1.00 16.11 O
ATOM 24 OP2 A B 20 47.445 16.052 17.285 1.00 17.77 O
ATOM 25 O5' A B 20 45.845 14.182 17.543 1.00 15.88 O
TER
Atoms:
OP1: (49.717,23.387,11.103)
OP2: (48.405,21.180,11.164)
C3': (46.134,22.399,7.436)
C1': (46.563,20.067,7.346)
C5': (48.426,22.909,8.430)
O4': (47.796,20.724,7.582)
C8: (45.628,19.919,9.724)
O2': (45.646,21.135,5.402)
C6: (46.099,16.566,10.690)
C5: (45.960,17.861,10.157)
C4: (46.366,18.049,8.848)
P: (49.521,21.996,10.621)
C4': (47.633,22.155,7.392)
C2': (45.582,21.117,6.816)
C2: (46.939,15.936,8.629)
N1: (46.596,15.606,9.881)
N3: (46.867,17.118,8.020)
N6: (45.775,16.240,11.948)
N7: (45.483,19.048,10.697)
N9: (46.181,19.387,8.585)
O5': (49.385,22.056,9.036)
O3': (45.840,23.550,6.648)
OP2: (48.405,21.180,11.164)
C3': (46.134,22.399,7.436)
C1': (46.563,20.067,7.346)
C5': (48.426,22.909,8.430)
O4': (47.796,20.724,7.582)
C8: (45.628,19.919,9.724)
O2': (45.646,21.135,5.402)
C6: (46.099,16.566,10.690)
C5: (45.960,17.861,10.157)
C4: (46.366,18.049,8.848)
P: (49.521,21.996,10.621)
C4': (47.633,22.155,7.392)
C2': (45.582,21.117,6.816)
C2: (46.939,15.936,8.629)
N1: (46.596,15.606,9.881)
N3: (46.867,17.118,8.020)
N6: (45.775,16.240,11.948)
N7: (45.483,19.048,10.697)
N9: (46.181,19.387,8.585)
O5': (49.385,22.056,9.036)
O3': (45.840,23.550,6.648)
C4: (42.223,21.115,12.221)
N3: (42.396,19.779,11.921)
OP1: (43.779,21.528,19.993)
OP2: (43.390,22.730,17.747)
C2: (42.674,18.770,12.805)
C1': (43.279,18.179,15.093)
C3': (44.611,17.742,16.965)
O5': (43.425,20.241,17.871)
O4': (42.391,18.044,16.186)
C5': (42.889,19.024,18.356)
P: (43.115,21.590,18.662)
C4': (43.154,17.860,17.420)
C2': (44.651,18.511,15.651)
O2': (45.575,17.968,14.726)
N1: (42.811,19.177,14.125)
O4: (42.077,21.922,11.305)
O2: (42.791,17.603,12.443)
C6: (42.586,20.473,14.495)
C5: (42.309,21.434,13.613)
O3': (45.002,16.399,16.770)
N3: (42.396,19.779,11.921)
OP1: (43.779,21.528,19.993)
OP2: (43.390,22.730,17.747)
C2: (42.674,18.770,12.805)
C1': (43.279,18.179,15.093)
C3': (44.611,17.742,16.965)
O5': (43.425,20.241,17.871)
O4': (42.391,18.044,16.186)
C5': (42.889,19.024,18.356)
P: (43.115,21.590,18.662)
C4': (43.154,17.860,17.420)
C2': (44.651,18.511,15.651)
O2': (45.575,17.968,14.726)
N1: (42.811,19.177,14.125)
O4: (42.077,21.922,11.305)
O2: (42.791,17.603,12.443)
C6: (42.586,20.473,14.495)
C5: (42.309,21.434,13.613)
O3': (45.002,16.399,16.770)
Image (generated by PyMOL):