Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A49:A19
Extra
PDB:
ATOM 1 O3' U A 48 -51.257 -20.423 10.694 1.00 49.42 O
ATOM 2 P A A 49 -50.108 -21.526 10.491 1.00 51.34 P
ATOM 3 OP1 A A 49 -50.664 -22.875 10.659 1.00 51.13 O
ATOM 4 OP2 A A 49 -48.914 -21.136 11.297 1.00 52.09 O
ATOM 5 O5' A A 49 -49.712 -21.418 8.953 1.00 49.92 O
ATOM 6 C5' A A 49 -48.510 -22.009 8.520 1.00 45.96 C
ATOM 7 C4' A A 49 -47.887 -21.238 7.383 1.00 44.14 C
ATOM 8 O4' A A 49 -48.047 -19.796 7.521 1.00 42.37 O
ATOM 9 C3' A A 49 -46.391 -21.478 7.329 1.00 42.99 C
ATOM 10 O3' A A 49 -46.176 -22.709 6.646 1.00 42.78 O
ATOM 11 C2' A A 49 -45.884 -20.211 6.643 1.00 41.34 C
ATOM 12 O2' A A 49 -46.029 -20.225 5.221 1.00 40.70 O
ATOM 13 C1' A A 49 -46.806 -19.148 7.265 1.00 40.50 C
ATOM 14 N9 A A 49 -46.377 -18.533 8.527 1.00 38.29 N
ATOM 15 C8 A A 49 -45.846 -19.140 9.640 1.00 36.29 C
ATOM 16 N7 A A 49 -45.688 -18.326 10.665 1.00 36.98 N
ATOM 17 C5 A A 49 -46.128 -17.099 10.191 1.00 36.69 C
ATOM 18 C6 A A 49 -46.259 -15.836 10.805 1.00 37.22 C
ATOM 19 N6 A A 49 -45.973 -15.590 12.099 1.00 35.22 N
ATOM 20 N1 A A 49 -46.719 -14.816 10.043 1.00 38.34 N
ATOM 21 C2 A A 49 -47.040 -15.068 8.759 1.00 38.44 C
ATOM 22 N3 A A 49 -46.979 -16.218 8.082 1.00 37.09 N
ATOM 23 C4 A A 49 -46.513 -17.202 8.860 1.00 36.99 C
ATOM 24 P A A 50 -44.822 -23.537 6.887 1.00 43.77 P
ATOM 25 OP1 A A 50 -44.851 -24.770 6.035 1.00 45.05 O
ATOM 26 OP2 A A 50 -44.606 -23.680 8.354 1.00 45.05 O
ATOM 27 O5' A A 50 -43.716 -22.593 6.236 1.00 41.51 O
TER
ATOM 1 O3' A B 18 -41.598 -20.703 18.950 1.00 29.70 O
ATOM 2 P U B 19 -43.182 -20.788 18.722 1.00 31.87 P
ATOM 3 OP1 U B 19 -43.818 -20.707 20.071 1.00 30.96 O
ATOM 4 OP2 U B 19 -43.512 -21.935 17.799 1.00 32.74 O
ATOM 5 O5' U B 19 -43.513 -19.442 17.919 1.00 27.91 O
ATOM 6 C5' U B 19 -43.144 -18.182 18.428 1.00 27.98 C
ATOM 7 C4' U B 19 -43.377 -17.118 17.379 1.00 26.56 C
ATOM 8 O4' U B 19 -42.566 -17.446 16.222 1.00 24.09 O
ATOM 9 C3' U B 19 -44.818 -17.016 16.894 1.00 26.73 C
ATOM 10 O3' U B 19 -45.156 -15.655 16.770 1.00 29.65 O
ATOM 11 C2' U B 19 -44.758 -17.643 15.493 1.00 26.31 C
ATOM 12 O2' U B 19 -45.653 -17.089 14.547 1.00 25.87 O
ATOM 13 C1' U B 19 -43.338 -17.301 15.060 1.00 25.27 C
ATOM 14 N1 U B 19 -42.930 -18.314 14.089 1.00 25.57 N
ATOM 15 C2 U B 19 -42.825 -17.915 12.767 1.00 26.17 C
ATOM 16 O2 U B 19 -42.925 -16.770 12.438 1.00 25.05 O
ATOM 17 N3 U B 19 -42.592 -18.937 11.849 1.00 25.77 N
ATOM 18 C4 U B 19 -42.442 -20.270 12.139 1.00 26.56 C
ATOM 19 O4 U B 19 -42.497 -21.094 11.211 1.00 24.17 O
ATOM 20 C5 U B 19 -42.491 -20.582 13.556 1.00 24.01 C
ATOM 21 C6 U B 19 -42.727 -19.614 14.455 1.00 23.54 C
ATOM 22 P A B 20 -46.269 -15.002 17.734 1.00 30.06 P
ATOM 23 OP1 A B 20 -45.821 -15.404 19.111 1.00 30.01 O
ATOM 24 OP2 A B 20 -47.641 -15.289 17.293 1.00 29.56 O
ATOM 25 O5' A B 20 -46.011 -13.462 17.513 1.00 27.22 O
TER
ATOM 2 P A A 49 -50.108 -21.526 10.491 1.00 51.34 P
ATOM 3 OP1 A A 49 -50.664 -22.875 10.659 1.00 51.13 O
ATOM 4 OP2 A A 49 -48.914 -21.136 11.297 1.00 52.09 O
ATOM 5 O5' A A 49 -49.712 -21.418 8.953 1.00 49.92 O
ATOM 6 C5' A A 49 -48.510 -22.009 8.520 1.00 45.96 C
ATOM 7 C4' A A 49 -47.887 -21.238 7.383 1.00 44.14 C
ATOM 8 O4' A A 49 -48.047 -19.796 7.521 1.00 42.37 O
ATOM 9 C3' A A 49 -46.391 -21.478 7.329 1.00 42.99 C
ATOM 10 O3' A A 49 -46.176 -22.709 6.646 1.00 42.78 O
ATOM 11 C2' A A 49 -45.884 -20.211 6.643 1.00 41.34 C
ATOM 12 O2' A A 49 -46.029 -20.225 5.221 1.00 40.70 O
ATOM 13 C1' A A 49 -46.806 -19.148 7.265 1.00 40.50 C
ATOM 14 N9 A A 49 -46.377 -18.533 8.527 1.00 38.29 N
ATOM 15 C8 A A 49 -45.846 -19.140 9.640 1.00 36.29 C
ATOM 16 N7 A A 49 -45.688 -18.326 10.665 1.00 36.98 N
ATOM 17 C5 A A 49 -46.128 -17.099 10.191 1.00 36.69 C
ATOM 18 C6 A A 49 -46.259 -15.836 10.805 1.00 37.22 C
ATOM 19 N6 A A 49 -45.973 -15.590 12.099 1.00 35.22 N
ATOM 20 N1 A A 49 -46.719 -14.816 10.043 1.00 38.34 N
ATOM 21 C2 A A 49 -47.040 -15.068 8.759 1.00 38.44 C
ATOM 22 N3 A A 49 -46.979 -16.218 8.082 1.00 37.09 N
ATOM 23 C4 A A 49 -46.513 -17.202 8.860 1.00 36.99 C
ATOM 24 P A A 50 -44.822 -23.537 6.887 1.00 43.77 P
ATOM 25 OP1 A A 50 -44.851 -24.770 6.035 1.00 45.05 O
ATOM 26 OP2 A A 50 -44.606 -23.680 8.354 1.00 45.05 O
ATOM 27 O5' A A 50 -43.716 -22.593 6.236 1.00 41.51 O
TER
ATOM 1 O3' A B 18 -41.598 -20.703 18.950 1.00 29.70 O
ATOM 2 P U B 19 -43.182 -20.788 18.722 1.00 31.87 P
ATOM 3 OP1 U B 19 -43.818 -20.707 20.071 1.00 30.96 O
ATOM 4 OP2 U B 19 -43.512 -21.935 17.799 1.00 32.74 O
ATOM 5 O5' U B 19 -43.513 -19.442 17.919 1.00 27.91 O
ATOM 6 C5' U B 19 -43.144 -18.182 18.428 1.00 27.98 C
ATOM 7 C4' U B 19 -43.377 -17.118 17.379 1.00 26.56 C
ATOM 8 O4' U B 19 -42.566 -17.446 16.222 1.00 24.09 O
ATOM 9 C3' U B 19 -44.818 -17.016 16.894 1.00 26.73 C
ATOM 10 O3' U B 19 -45.156 -15.655 16.770 1.00 29.65 O
ATOM 11 C2' U B 19 -44.758 -17.643 15.493 1.00 26.31 C
ATOM 12 O2' U B 19 -45.653 -17.089 14.547 1.00 25.87 O
ATOM 13 C1' U B 19 -43.338 -17.301 15.060 1.00 25.27 C
ATOM 14 N1 U B 19 -42.930 -18.314 14.089 1.00 25.57 N
ATOM 15 C2 U B 19 -42.825 -17.915 12.767 1.00 26.17 C
ATOM 16 O2 U B 19 -42.925 -16.770 12.438 1.00 25.05 O
ATOM 17 N3 U B 19 -42.592 -18.937 11.849 1.00 25.77 N
ATOM 18 C4 U B 19 -42.442 -20.270 12.139 1.00 26.56 C
ATOM 19 O4 U B 19 -42.497 -21.094 11.211 1.00 24.17 O
ATOM 20 C5 U B 19 -42.491 -20.582 13.556 1.00 24.01 C
ATOM 21 C6 U B 19 -42.727 -19.614 14.455 1.00 23.54 C
ATOM 22 P A B 20 -46.269 -15.002 17.734 1.00 30.06 P
ATOM 23 OP1 A B 20 -45.821 -15.404 19.111 1.00 30.01 O
ATOM 24 OP2 A B 20 -47.641 -15.289 17.293 1.00 29.56 O
ATOM 25 O5' A B 20 -46.011 -13.462 17.513 1.00 27.22 O
TER
Atoms:
OP1: (-50.664,-22.875,10.659)
OP2: (-48.914,-21.136,11.297)
C3': (-46.391,-21.478,7.329)
C1': (-46.806,-19.148,7.265)
C5': (-48.510,-22.009,8.520)
O4': (-48.047,-19.796,7.521)
C8: (-45.846,-19.140,9.640)
O2': (-46.029,-20.225,5.221)
C6: (-46.259,-15.836,10.805)
C5: (-46.128,-17.099,10.191)
C4: (-46.513,-17.202,8.860)
P: (-50.108,-21.526,10.491)
C4': (-47.887,-21.238,7.383)
C2': (-45.884,-20.211,6.643)
C2: (-47.040,-15.068,8.759)
N1: (-46.719,-14.816,10.043)
N3: (-46.979,-16.218,8.082)
N6: (-45.973,-15.590,12.099)
N7: (-45.688,-18.326,10.665)
N9: (-46.377,-18.533,8.527)
O5': (-49.712,-21.418,8.953)
O3': (-46.176,-22.709,6.646)
OP2: (-48.914,-21.136,11.297)
C3': (-46.391,-21.478,7.329)
C1': (-46.806,-19.148,7.265)
C5': (-48.510,-22.009,8.520)
O4': (-48.047,-19.796,7.521)
C8: (-45.846,-19.140,9.640)
O2': (-46.029,-20.225,5.221)
C6: (-46.259,-15.836,10.805)
C5: (-46.128,-17.099,10.191)
C4: (-46.513,-17.202,8.860)
P: (-50.108,-21.526,10.491)
C4': (-47.887,-21.238,7.383)
C2': (-45.884,-20.211,6.643)
C2: (-47.040,-15.068,8.759)
N1: (-46.719,-14.816,10.043)
N3: (-46.979,-16.218,8.082)
N6: (-45.973,-15.590,12.099)
N7: (-45.688,-18.326,10.665)
N9: (-46.377,-18.533,8.527)
O5': (-49.712,-21.418,8.953)
O3': (-46.176,-22.709,6.646)
C4: (-42.442,-20.270,12.139)
N3: (-42.592,-18.937,11.849)
OP1: (-43.818,-20.707,20.071)
OP2: (-43.512,-21.935,17.799)
C2: (-42.825,-17.915,12.767)
C1': (-43.338,-17.301,15.060)
C3': (-44.818,-17.016,16.894)
O5': (-43.513,-19.442,17.919)
O4': (-42.566,-17.446,16.222)
C5': (-43.144,-18.182,18.428)
P: (-43.182,-20.788,18.722)
C4': (-43.377,-17.118,17.379)
C2': (-44.758,-17.643,15.493)
O2': (-45.653,-17.089,14.547)
N1: (-42.930,-18.314,14.089)
O4: (-42.497,-21.094,11.211)
O2: (-42.925,-16.770,12.438)
C6: (-42.727,-19.614,14.455)
C5: (-42.491,-20.582,13.556)
O3': (-45.156,-15.655,16.770)
N3: (-42.592,-18.937,11.849)
OP1: (-43.818,-20.707,20.071)
OP2: (-43.512,-21.935,17.799)
C2: (-42.825,-17.915,12.767)
C1': (-43.338,-17.301,15.060)
C3': (-44.818,-17.016,16.894)
O5': (-43.513,-19.442,17.919)
O4': (-42.566,-17.446,16.222)
C5': (-43.144,-18.182,18.428)
P: (-43.182,-20.788,18.722)
C4': (-43.377,-17.118,17.379)
C2': (-44.758,-17.643,15.493)
O2': (-45.653,-17.089,14.547)
N1: (-42.930,-18.314,14.089)
O4: (-42.497,-21.094,11.211)
O2: (-42.925,-16.770,12.438)
C6: (-42.727,-19.614,14.455)
C5: (-42.491,-20.582,13.556)
O3': (-45.156,-15.655,16.770)
Image (generated by PyMOL):