ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A664:A661

Extra

PDB:
ATOM 1 O3' A A 663 104.086 25.029 -27.132 1.00 81.45 O
ATOM 2 P A A 664 103.709 24.001 -28.311 1.00 88.58 P
ATOM 3 OP1 A A 664 104.645 24.174 -29.462 1.00 88.97 O
ATOM 4 OP2 A A 664 102.248 24.191 -28.513 1.00 83.39 O
ATOM 5 O5' A A 664 103.948 22.549 -27.683 1.00 87.10 O
ATOM 6 C5' A A 664 103.285 21.391 -28.212 1.00 82.47 C
ATOM 7 C4' A A 664 103.400 20.215 -27.255 1.00 81.18 C
ATOM 8 O4' A A 664 102.932 20.599 -25.938 1.00 82.09 O
ATOM 9 C3' A A 664 102.561 19.004 -27.639 1.00 76.09 C
ATOM 10 O3' A A 664 103.283 18.154 -28.522 1.00 72.39 O
ATOM 11 C2' A A 664 102.260 18.336 -26.300 1.00 75.63 C
ATOM 12 O2' A A 664 103.249 17.436 -25.849 1.00 69.27 O
ATOM 13 C1' A A 664 102.194 19.539 -25.360 1.00 82.22 C
ATOM 14 N9 A A 664 100.834 20.023 -25.154 1.00 81.16 N
ATOM 15 C8 A A 664 100.286 21.172 -25.664 1.00 82.65 C
ATOM 16 N7 A A 664 99.049 21.374 -25.295 1.00 83.87 N
ATOM 17 C5 A A 664 98.760 20.283 -24.490 1.00 79.62 C
ATOM 18 C6 A A 664 97.605 19.912 -23.790 1.00 75.18 C
ATOM 19 N6 A A 664 96.497 20.643 -23.767 1.00 71.51 N
ATOM 20 N1 A A 664 97.631 18.754 -23.102 1.00 74.80 N
ATOM 21 C2 A A 664 98.756 18.030 -23.117 1.00 78.29 C
ATOM 22 N3 A A 664 99.912 18.279 -23.729 1.00 78.15 N
ATOM 23 C4 A A 664 99.847 19.437 -24.406 1.00 78.78 C
ATOM 24 P A A 665 102.514 17.402 -29.714 1.00 78.69 P
ATOM 25 OP1 A A 665 103.499 16.938 -30.719 1.00 68.25 O
ATOM 26 OP2 A A 665 101.408 18.302 -30.135 1.00 76.53 O
ATOM 27 O5' A A 665 101.883 16.124 -29.004 1.00 72.25 O
TER

ATOM 1 O3' G B 660 92.361 23.770 -25.245 1.00 65.42 O
ATOM 2 P U B 661 92.542 25.295 -24.804 1.00 70.49 P
ATOM 3 OP1 U B 661 91.512 25.611 -23.778 1.00 63.10 O
ATOM 4 OP2 U B 661 92.604 26.110 -26.045 1.00 73.21 O
ATOM 5 O5' U B 661 93.989 25.304 -24.134 1.00 65.25 O
ATOM 6 C5' U B 661 94.233 24.619 -22.912 1.00 69.22 C
ATOM 7 C4' U B 661 95.714 24.526 -22.652 1.00 69.67 C
ATOM 8 O4' U B 661 96.338 23.820 -23.758 1.00 72.19 O
ATOM 9 C3' U B 661 96.490 25.833 -22.558 1.00 77.63 C
ATOM 10 O3' U B 661 96.415 26.435 -21.266 1.00 84.20 O
ATOM 11 C2' U B 661 97.908 25.389 -22.902 1.00 78.46 C
ATOM 12 O2' U B 661 98.535 24.785 -21.784 1.00 73.56 O
ATOM 13 C1' U B 661 97.650 24.324 -23.973 1.00 76.65 C
ATOM 14 N1 U B 661 97.782 24.789 -25.373 1.00 79.65 N
ATOM 15 C2 U B 661 99.068 24.919 -25.913 1.00 79.61 C
ATOM 16 O2 U B 661 100.086 24.718 -25.272 1.00 81.72 O
ATOM 17 N3 U B 661 99.117 25.299 -27.233 1.00 76.74 N
ATOM 18 C4 U B 661 98.052 25.575 -28.066 1.00 71.06 C
ATOM 19 O4 U B 661 98.260 25.827 -29.262 1.00 65.65 O
ATOM 20 C5 U B 661 96.766 25.457 -27.443 1.00 72.83 C
ATOM 21 C6 U B 661 96.674 25.080 -26.155 1.00 78.62 C
ATOM 22 P G B 662 96.580 28.042 -21.107 1.00 93.98 P
ATOM 23 OP1 G B 662 95.500 28.480 -20.173 1.00 94.51 O
ATOM 24 OP2 G B 662 96.716 28.707 -22.445 1.00 82.84 O
ATOM 25 O5' G B 662 97.996 28.208 -20.387 1.00 82.10 O
TER

Atoms:
OP1: (104.645,24.174,-29.462)
OP2: (102.248,24.191,-28.513)
C3': (102.561,19.004,-27.639)
C1': (102.194,19.539,-25.360)
C5': (103.285,21.391,-28.212)
O4': (102.932,20.599,-25.938)
C8: (100.286,21.172,-25.664)
O2': (103.249,17.436,-25.849)
C6: (97.605,19.912,-23.790)
C5: (98.760,20.283,-24.490)
C4: (99.847,19.437,-24.406)
P: (103.709,24.001,-28.311)
C4': (103.400,20.215,-27.255)
C2': (102.260,18.336,-26.300)
C2: (98.756,18.030,-23.117)
N1: (97.631,18.754,-23.102)
N3: (99.912,18.279,-23.729)
N6: (96.497,20.643,-23.767)
N7: (99.049,21.374,-25.295)
N9: (100.834,20.023,-25.154)
O5': (103.948,22.549,-27.683)
O3': (103.283,18.154,-28.522)
C4: (98.052,25.575,-28.066)
N3: (99.117,25.299,-27.233)
OP1: (91.512,25.611,-23.778)
OP2: (92.604,26.110,-26.045)
C2: (99.068,24.919,-25.913)
C1': (97.650,24.324,-23.973)
C3': (96.490,25.833,-22.558)
O5': (93.989,25.304,-24.134)
O4': (96.338,23.820,-23.758)
C5': (94.233,24.619,-22.912)
P: (92.542,25.295,-24.804)
C4': (95.714,24.526,-22.652)
C2': (97.908,25.389,-22.902)
O2': (98.535,24.785,-21.784)
N1: (97.782,24.789,-25.373)
O4: (98.260,25.827,-29.262)
O2: (100.086,24.718,-25.272)
C6: (96.674,25.080,-26.155)
C5: (96.766,25.457,-27.443)
O3': (96.415,26.435,-21.266)
Image (generated by PyMOL):
PyMOL image
show in jmol