ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MOJ:A57:A55

Extra

PDB:
ATOM 1 O3' A A 56 -16.102 14.688 21.059 1.00 78.94 O
ATOM 2 P A A 57 -17.366 13.781 21.434 1.00101.41 P
ATOM 3 OP1 A A 57 -18.535 14.297 20.698 1.00106.46 O
ATOM 4 OP2 A A 57 -17.411 13.644 22.908 1.00 77.41 O
ATOM 5 O5' A A 57 -16.964 12.356 20.836 1.00 79.59 O
ATOM 6 C5' A A 57 -16.704 12.210 19.447 1.00 77.03 C
ATOM 7 C4' A A 57 -15.818 11.001 19.219 1.00 93.74 C
ATOM 8 O4' A A 57 -14.515 11.237 19.812 1.00105.57 O
ATOM 9 C3' A A 57 -16.318 9.722 19.874 1.00102.61 C
ATOM 10 O3' A A 57 -17.251 9.071 19.013 1.00110.51 O
ATOM 11 C2' A A 57 -15.026 8.928 20.076 1.00100.97 C
ATOM 12 O2' A A 57 -14.608 8.214 18.928 1.00 96.05 O
ATOM 13 C1' A A 57 -14.017 10.034 20.372 1.00110.64 C
ATOM 14 N9 A A 57 -13.812 10.240 21.799 1.00109.42 N
ATOM 15 C8 A A 57 -14.765 10.602 22.699 1.00108.19 C
ATOM 16 N7 A A 57 -14.313 10.721 23.922 1.00106.08 N
ATOM 17 C5 A A 57 -12.971 10.419 23.816 1.00 95.65 C
ATOM 18 C6 A A 57 -11.945 10.370 24.773 1.00 91.66 C
ATOM 19 N6 A A 57 -12.145 10.642 26.066 1.00 98.16 N
ATOM 20 N1 A A 57 -10.713 10.027 24.346 1.00 79.60 N
ATOM 21 C2 A A 57 -10.531 9.763 23.045 1.00 75.32 C
ATOM 22 N3 A A 57 -11.418 9.782 22.052 1.00 85.82 N
ATOM 23 C4 A A 57 -12.637 10.120 22.511 1.00101.80 C
ATOM 24 P A A 58 -18.745 8.775 19.520 1.00151.19 P
ATOM 25 OP1 A A 58 -19.724 9.377 18.585 1.00142.53 O
ATOM 26 OP2 A A 58 -18.824 9.099 20.960 1.00150.02 O
ATOM 27 O5' A A 58 -18.792 7.188 19.391 1.00108.37 O
TER

ATOM 1 O3' U B 54 -19.807 16.606 29.386 1.00238.24 O
ATOM 2 P U B 55 -18.795 16.233 28.211 1.00358.18 P
ATOM 3 OP1 U B 55 -17.414 16.399 28.718 1.00358.93 O
ATOM 4 OP2 U B 55 -19.235 16.955 26.996 1.00357.27 O
ATOM 5 O5' U B 55 -19.102 14.673 27.998 1.00148.89 O
ATOM 6 C5' U B 55 -18.301 13.689 28.660 1.00126.57 C
ATOM 7 C4' U B 55 -17.375 12.961 27.696 1.00101.56 C
ATOM 8 O4' U B 55 -18.077 11.848 27.085 1.00 93.83 O
ATOM 9 C3' U B 55 -16.839 13.767 26.515 1.00 94.52 C
ATOM 10 O3' U B 55 -15.724 14.557 26.912 1.00 93.51 O
ATOM 11 C2' U B 55 -16.395 12.618 25.613 1.00 98.85 C
ATOM 12 O2' U B 55 -15.136 12.102 26.014 1.00102.18 O
ATOM 13 C1' U B 55 -17.503 11.578 25.820 1.00 93.63 C
ATOM 14 N1 U B 55 -18.560 11.631 24.754 1.00 95.09 N
ATOM 15 C2 U B 55 -18.386 10.883 23.608 1.00100.01 C
ATOM 16 O2 U B 55 -17.421 10.168 23.428 1.00121.36 O
ATOM 17 N3 U B 55 -19.384 10.990 22.670 1.00 91.24 N
ATOM 18 C4 U B 55 -20.524 11.768 22.765 1.00100.80 C
ATOM 19 O4 U B 55 -21.334 11.764 21.841 1.00107.69 O
ATOM 20 C5 U B 55 -20.641 12.529 23.990 1.00 88.79 C
ATOM 21 C6 U B 55 -19.677 12.433 24.916 1.00 88.76 C
ATOM 22 P A B 56 -15.415 15.999 26.294 1.00130.01 P
ATOM 23 OP1 A B 56 -14.425 16.629 27.194 1.00135.03 O
ATOM 24 OP2 A B 56 -16.706 16.666 26.029 1.00117.54 O
ATOM 25 O5' A B 56 -14.721 15.738 24.873 1.00 94.99 O
TER

Atoms:
OP1: (-18.535,14.297,20.698)
OP2: (-17.411,13.644,22.908)
C3': (-16.318,9.722,19.874)
C1': (-14.017,10.034,20.372)
C5': (-16.704,12.210,19.447)
O4': (-14.515,11.237,19.812)
C8: (-14.765,10.602,22.699)
O2': (-14.608,8.214,18.928)
C6: (-11.945,10.370,24.773)
C5: (-12.971,10.419,23.816)
C4: (-12.637,10.120,22.511)
P: (-17.366,13.781,21.434)
C4': (-15.818,11.001,19.219)
C2': (-15.026,8.928,20.076)
C2: (-10.531,9.763,23.045)
N1: (-10.713,10.027,24.346)
N3: (-11.418,9.782,22.052)
N6: (-12.145,10.642,26.066)
N7: (-14.313,10.721,23.922)
N9: (-13.812,10.240,21.799)
O5': (-16.964,12.356,20.836)
O3': (-17.251,9.071,19.013)
C4: (-20.524,11.768,22.765)
N3: (-19.384,10.990,22.670)
OP1: (-17.414,16.399,28.718)
OP2: (-19.235,16.955,26.996)
C2: (-18.386,10.883,23.608)
C1': (-17.503,11.578,25.820)
C3': (-16.839,13.767,26.515)
O5': (-19.102,14.673,27.998)
O4': (-18.077,11.848,27.085)
C5': (-18.301,13.689,28.660)
P: (-18.795,16.233,28.211)
C4': (-17.375,12.961,27.696)
C2': (-16.395,12.618,25.613)
O2': (-15.136,12.102,26.014)
N1: (-18.560,11.631,24.754)
O4: (-21.334,11.764,21.841)
O2: (-17.421,10.168,23.428)
C6: (-19.677,12.433,24.916)
C5: (-20.641,12.529,23.990)
O3': (-15.724,14.557,26.912)
Image (generated by PyMOL):
PyMOL image
show in jmol