ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OI1:A246:A442

Extra

PDB:
ATOM 1 O3' C A 245 199.840 -20.477-139.510 1.00 77.68 O
ATOM 2 P A A 246 199.897 -18.909-139.883 1.00108.31 P
ATOM 3 OP1 A A 246 201.313 -18.452-139.647 1.00 76.65 O
ATOM 4 OP2 A A 246 198.781 -18.244-139.131 1.00 71.67 O
ATOM 5 O5' A A 246 199.573 -18.907-141.452 1.00 75.30 O
ATOM 6 C5' A A 246 199.330 -17.696-142.153 1.00 55.64 C
ATOM 7 C4' A A 246 199.182 -17.941-143.629 1.00 62.39 C
ATOM 8 O4' A A 246 200.420 -18.524-144.156 1.00 65.48 O
ATOM 9 C3' A A 246 198.074 -18.926-144.011 1.00 67.65 C
ATOM 10 O3' A A 246 197.550 -18.564-145.295 1.00 78.89 O
ATOM 11 C2' A A 246 198.863 -20.221-144.154 1.00 65.52 C
ATOM 12 O2' A A 246 198.225 -21.235-144.892 1.00 74.84 O
ATOM 13 C1' A A 246 200.071 -19.685-144.876 1.00 66.58 C
ATOM 14 N9 A A 246 201.204 -20.612-144.969 1.00 76.30 N
ATOM 15 C8 A A 246 201.358 -21.460-146.056 1.00 83.27 C
ATOM 16 N7 A A 246 202.400 -22.248-146.044 1.00 63.72 N
ATOM 17 C5 A A 246 202.972 -21.891-144.846 1.00 57.70 C
ATOM 18 C6 A A 246 204.126 -22.393-144.280 1.00 64.72 C
ATOM 19 N6 A A 246 204.846 -23.346-144.876 1.00 60.99 N
ATOM 20 N1 A A 246 204.478 -21.856-143.090 1.00 78.72 N
ATOM 21 C2 A A 246 203.690 -20.893-142.546 1.00 77.72 C
ATOM 22 N3 A A 246 202.560 -20.337-142.987 1.00 59.68 N
ATOM 23 C4 A A 246 202.263 -20.898-144.161 1.00 61.50 C
ATOM 24 P G A 247 196.648 -17.246-145.481 1.00 82.98 P
ATOM 25 OP1 G A 247 196.277 -16.769-144.121 1.00 64.77 O
ATOM 26 OP2 G A 247 195.564 -17.596-146.435 1.00 65.87 O
ATOM 27 O5' G A 247 197.659 -16.217-146.168 1.00 67.41 O
TER

ATOM 1 O3' C B 441 206.927 -28.783-152.431 1.00 73.14 O
ATOM 2 P U B 442 206.173 -29.719-151.352 1.00 87.33 P
ATOM 3 OP1 U B 442 207.225 -30.554-150.702 1.00 72.45 O
ATOM 4 OP2 U B 442 205.060 -30.401-152.063 1.00 88.16 O
ATOM 5 O5' U B 442 205.586 -28.660-150.305 1.00 63.77 O
ATOM 6 C5' U B 442 206.439 -27.681-149.738 1.00 62.36 C
ATOM 7 C4' U B 442 205.679 -26.543-149.111 1.00 54.36 C
ATOM 8 O4' U B 442 205.000 -25.759-150.117 1.00 58.78 O
ATOM 9 C3' U B 442 204.577 -26.914-148.148 1.00 57.01 C
ATOM 10 O3' U B 442 205.073 -27.300-146.894 1.00 62.65 O
ATOM 11 C2' U B 442 203.778 -25.626-148.088 1.00 66.65 C
ATOM 12 O2' U B 442 204.430 -24.668-147.261 1.00 73.94 O
ATOM 13 C1' U B 442 203.862 -25.154-149.538 1.00 61.25 C
ATOM 14 N1 U B 442 202.673 -25.559-150.288 1.00 70.63 N
ATOM 15 C2 U B 442 201.488 -24.920-149.931 1.00 70.34 C
ATOM 16 O2 U B 442 201.436 -24.045-149.062 1.00 66.47 O
ATOM 17 N3 U B 442 200.390 -25.350-150.650 1.00 60.81 N
ATOM 18 C4 U B 442 200.384 -26.327-151.635 1.00 57.54 C
ATOM 19 O4 U B 442 199.343 -26.615-152.200 1.00 72.12 O
ATOM 20 C5 U B 442 201.634 -26.942-151.927 1.00 59.91 C
ATOM 21 C6 U B 442 202.721 -26.547-151.248 1.00 71.15 C
ATOM 22 P A B 443 204.598 -28.671-146.206 1.00 77.12 P
ATOM 23 OP1 A B 443 204.700 -29.745-147.244 1.00 67.23 O
ATOM 24 OP2 A B 443 203.267 -28.415-145.558 1.00 64.12 O
ATOM 25 O5' A B 443 205.726 -28.867-145.086 1.00 74.53 O
TER

Atoms:
OP1: (201.313,-18.452,-139.647)
OP2: (198.781,-18.244,-139.131)
C3': (198.074,-18.926,-144.011)
C1': (200.071,-19.685,-144.876)
C5': (199.330,-17.696,-142.153)
O4': (200.420,-18.524,-144.156)
C8: (201.358,-21.460,-146.056)
O2': (198.225,-21.235,-144.892)
C6: (204.126,-22.393,-144.280)
C5: (202.972,-21.891,-144.846)
C4: (202.263,-20.898,-144.161)
P: (199.897,-18.909,-139.883)
C4': (199.182,-17.941,-143.629)
C2': (198.863,-20.221,-144.154)
C2: (203.690,-20.893,-142.546)
N1: (204.478,-21.856,-143.090)
N3: (202.560,-20.337,-142.987)
N6: (204.846,-23.346,-144.876)
N7: (202.400,-22.248,-146.044)
N9: (201.204,-20.612,-144.969)
O5': (199.573,-18.907,-141.452)
O3': (197.550,-18.564,-145.295)
C4: (200.384,-26.327,-151.635)
N3: (200.390,-25.350,-150.650)
OP1: (207.225,-30.554,-150.702)
OP2: (205.060,-30.401,-152.063)
C2: (201.488,-24.920,-149.931)
C1': (203.862,-25.154,-149.538)
C3': (204.577,-26.914,-148.148)
O5': (205.586,-28.660,-150.305)
O4': (205.000,-25.759,-150.117)
C5': (206.439,-27.681,-149.738)
P: (206.173,-29.719,-151.352)
C4': (205.679,-26.543,-149.111)
C2': (203.778,-25.626,-148.088)
O2': (204.430,-24.668,-147.261)
N1: (202.673,-25.559,-150.288)
O4: (199.343,-26.615,-152.200)
O2: (201.436,-24.045,-149.062)
C6: (202.721,-26.547,-151.248)
C5: (201.634,-26.942,-151.927)
O3': (205.073,-27.300,-146.894)
Image (generated by PyMOL):
PyMOL image
show in jmol