ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A863:A861

Extra

PDB:
ATOM 1 O3' A A 862 -81.420 47.451 -25.144 1.00 7.22 O
ATOM 2 P A A 863 -80.699 48.839 -24.773 1.00 6.42 P
ATOM 3 OP1 A A 863 -81.185 49.847 -25.714 1.00 6.42 O
ATOM 4 OP2 A A 863 -79.240 48.596 -24.696 1.00 6.42 O
ATOM 5 O5' A A 863 -81.297 49.125 -23.334 1.00 6.42 O
ATOM 6 C5' A A 863 -82.698 48.978 -23.103 1.00 6.42 C
ATOM 7 C4' A A 863 -83.003 47.896 -22.089 1.00 6.42 C
ATOM 8 O4' A A 863 -82.454 46.628 -22.530 1.00 6.42 O
ATOM 9 C3' A A 863 -82.420 48.103 -20.705 1.00 6.42 C
ATOM 10 O3' A A 863 -83.219 48.955 -19.906 1.00 6.42 O
ATOM 11 C2' A A 863 -82.310 46.680 -20.162 1.00 6.42 C
ATOM 12 O2' A A 863 -83.555 46.232 -19.655 1.00 6.42 O
ATOM 13 C1' A A 863 -82.001 45.882 -21.422 1.00 6.42 C
ATOM 14 N9 A A 863 -80.560 45.617 -21.582 1.00 6.66 N
ATOM 15 C8 A A 863 -79.684 46.218 -22.427 1.00 6.66 C
ATOM 16 N7 A A 863 -78.476 45.750 -22.358 1.00 6.66 N
ATOM 17 C5 A A 863 -78.552 44.750 -21.410 1.00 6.66 C
ATOM 18 C6 A A 863 -77.593 43.848 -20.875 1.00 6.66 C
ATOM 19 N6 A A 863 -76.301 43.807 -21.237 1.00 6.66 N
ATOM 20 N1 A A 863 -78.004 42.972 -19.930 1.00 6.66 N
ATOM 21 C2 A A 863 -79.284 43.014 -19.571 1.00 6.66 C
ATOM 22 N3 A A 863 -80.283 43.803 -19.999 1.00 6.66 N
ATOM 23 C4 A A 863 -79.841 44.664 -20.927 1.00 6.66 C
ATOM 24 P C A 864 -82.541 49.891 -18.795 1.00 6.53 P
ATOM 25 OP1 C A 864 -83.605 50.760 -18.234 1.00 6.53 O
ATOM 26 OP2 C A 864 -81.366 50.527 -19.431 1.00 6.53 O
ATOM 27 O5' C A 864 -82.060 48.846 -17.689 1.00 6.53 O
TER

ATOM 1 O3' C B 860 -71.472 50.270 -27.129 1.00 18.56 O
ATOM 2 P U B 861 -72.716 49.818 -28.027 1.00 23.55 P
ATOM 3 OP1 U B 861 -72.196 48.962 -29.112 1.00 23.55 O
ATOM 4 OP2 U B 861 -73.444 51.047 -28.379 1.00 23.55 O
ATOM 5 O5' U B 861 -73.599 48.956 -27.021 1.00 23.55 O
ATOM 6 C5' U B 861 -73.118 47.737 -26.473 1.00 23.55 C
ATOM 7 C4' U B 861 -73.989 47.267 -25.335 1.00 23.55 C
ATOM 8 O4' U B 861 -73.968 48.239 -24.266 1.00 23.55 O
ATOM 9 C3' U B 861 -75.463 47.119 -25.641 1.00 23.55 C
ATOM 10 O3' U B 861 -75.762 45.927 -26.318 1.00 23.55 O
ATOM 11 C2' U B 861 -76.095 47.200 -24.266 1.00 23.55 C
ATOM 12 O2' U B 861 -75.976 45.966 -23.590 1.00 23.55 O
ATOM 13 C1' U B 861 -75.196 48.206 -23.572 1.00 23.55 C
ATOM 14 N1 U B 861 -75.777 49.545 -23.563 1.00 24.12 N
ATOM 15 C2 U B 861 -76.314 49.941 -22.370 1.00 24.12 C
ATOM 16 O2 U B 861 -76.308 49.226 -21.404 1.00 24.12 O
ATOM 17 N3 U B 861 -76.858 51.183 -22.324 1.00 24.12 N
ATOM 18 C4 U B 861 -76.911 52.061 -23.374 1.00 24.12 C
ATOM 19 O4 U B 861 -77.431 53.163 -23.199 1.00 24.12 O
ATOM 20 C5 U B 861 -76.326 51.579 -24.596 1.00 24.12 C
ATOM 21 C6 U B 861 -75.788 50.356 -24.652 1.00 24.12 C
ATOM 22 P A B 862 -76.867 45.933 -27.464 1.00 7.22 P
ATOM 23 OP1 A B 862 -77.110 44.530 -27.868 1.00 7.22 O
ATOM 24 OP2 A B 862 -76.424 46.891 -28.488 1.00 7.22 O
ATOM 25 O5' A B 862 -78.130 46.500 -26.723 1.00 7.22 O
TER

Atoms:
OP1: (-81.185,49.847,-25.714)
OP2: (-79.240,48.596,-24.696)
C3': (-82.420,48.103,-20.705)
C1': (-82.001,45.882,-21.422)
C5': (-82.698,48.978,-23.103)
O4': (-82.454,46.628,-22.530)
C8: (-79.684,46.218,-22.427)
O2': (-83.555,46.232,-19.655)
C6: (-77.593,43.848,-20.875)
C5: (-78.552,44.750,-21.410)
C4: (-79.841,44.664,-20.927)
P: (-80.699,48.839,-24.773)
C4': (-83.003,47.896,-22.089)
C2': (-82.310,46.680,-20.162)
C2: (-79.284,43.014,-19.571)
N1: (-78.004,42.972,-19.930)
N3: (-80.283,43.803,-19.999)
N6: (-76.301,43.807,-21.237)
N7: (-78.476,45.750,-22.358)
N9: (-80.560,45.617,-21.582)
O5': (-81.297,49.125,-23.334)
O3': (-83.219,48.955,-19.906)
C4: (-76.911,52.061,-23.374)
N3: (-76.858,51.183,-22.324)
OP1: (-72.196,48.962,-29.112)
OP2: (-73.444,51.047,-28.379)
C2: (-76.314,49.941,-22.370)
C1': (-75.196,48.206,-23.572)
C3': (-75.463,47.119,-25.641)
O5': (-73.599,48.956,-27.021)
O4': (-73.968,48.239,-24.266)
C5': (-73.118,47.737,-26.473)
P: (-72.716,49.818,-28.027)
C4': (-73.989,47.267,-25.335)
C2': (-76.095,47.200,-24.266)
O2': (-75.976,45.966,-23.590)
N1: (-75.777,49.545,-23.563)
O4: (-77.431,53.163,-23.199)
O2: (-76.308,49.226,-21.404)
C6: (-75.788,50.356,-24.652)
C5: (-76.326,51.579,-24.596)
O3': (-75.762,45.927,-26.318)
Image (generated by PyMOL):
PyMOL image
show in jmol